Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00226 TCAAAATATGTGTTAAAACGGCAAGCGGGGGACATTCAGAGGCACGTCTGTCGCTAGTTTCTAGAACCTTCTTTCTTCTCTCCGAGCTCAATCCGCCGTTGATCCCAATTGGTTTAGATCGCATCTTCAACCCTCCCCTACCCGAGGAGAGATCATCCACCTGAAAAGCAATGTGATCGTCGATCTTCTTCTTTTCAAAGCTACTTCGCACCAGAACAAGGAGATTGCATTCATCGTGTTGCGGATTTTGTGTTCGTCTGTTGGATTATCCACTCCCTTTGATGTGAGATGGACAGTATTCATGCGAGCGATGGACGGATGCATATTAGCCATGCACAGCATTCGATGCACACACAATCTGTGCAAGACCAGGAACATCATGACTTGCATTATATGAGTAATGGGGATGGATTGGCTGATGAACATGAAAATGAAGGTCATGGTATTATGGTTGGGGAAAGGGAAGTTCAATCGGACCATGGCGATCTTGCCGAGAATCGTGGTGTAATGGTGGATCGAGGTGGCGATAACTGCGACCAGCTCAGCCTGTCTTATCAGGGTCAAGTTTATGTTTTCGATTCCGTCTCGCCCGAAAAGGTTCAAGCCGTGTTATTATTATTGGGAGGTCATGAAGTACCTTTGCGTGTTCCGTCAATCCCAATAACCAATCAACAAAATGATAGGGCACTTGCCAATATCCCCCCACGTCTAAGTGTCCCTCAGAGATTAGCTTCTTTGATTAGATTTCGTGAAAAGCGAAAGGAACGAAATTTTGACAAGAAAATTCGGTATACAGTTCGTAAAGAGGTAGCACTTAGGATGCAGCGTAATAAAGGCCAGTTCACATCTTCTAAACCCATTCATGAAGATTCATCATTGGCCATAGCAAGTTGGGAACCAAATGAGGGTTGGAGTAATGATGGAAATGGATCCCAACAACAGGAGATTCTTTGCCGACATTGTGGTATTAGTGAGAAGTCAACACCAATGATGCGACGTGGACCAGATGGGCCAAGAACCCTTTGCAATGCTTGCGGACTCATGTGGGCAAACAAGGGAACTCTCCGGGACCTCTCAAAAGCTCCAAATCAAGGTGGACAAACTGCAACCTTCAATAGAAATGAGAATGCTGTGCAGAATGGAGATTCTGAGTCCAACCCAAATGGTGTTTAGAATTGTGACAGATGTTTATGATTCCTGCTGCAGAATTTAGCAAAAATCATACGTATCTCCTACAGAGATTAGTTTGAAACGGGTTAATCGACATTTGACAGATTTAAAATTTCACTGATGGATATGAATATTCACACCCATCGACAGAGAAACCCTTGTTTATCTTCTAAGCTGGCTAATTCATCTTGGAATCAAGGGCACCGTGTACGCGTACTAATTTATTGGCCTCTTGTTTTATCATACTGCGAACCATTTCAAATTATCAATTCCTAGAATCTTGTAAATTATCATTTCCTGCGGGTGTACAATGGACGTTTTTTTTAAAATCCGATTCTATTTTTGTCCTG 1520 43.09 MDSIHASDGRMHISHAQHSMHTQSVQDQEHHDLHYMSNGDGLADEHENEGHGIMVGEREVQSDHGDLAENRGVMVDRGGDNCDQLSLSYQGQVYVFDSVSPEKVQAVLLLLGGHEVPLRVPSIPITNQQNDRALANIPPRLSVPQRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKPIHEDSSLAIASWEPNEGWSNDGNGSQQQEILCRHCGISEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSKAPNQGGQTATFNRNENAVQNGDSESNPNGV 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4919810 4924670 - XM_039042355.1 Bhi09g00226 42843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00226 294 ProSiteProfiles Tify domain profile. 78 113 IPR010399 -
Bhi09g00226 294 ProSiteProfiles GATA-type zinc finger domain profile. 216 277 IPR000679 GO:0006355|GO:0043565
Bhi09g00226 294 PANTHER GATA TRANSCRIPTION FACTOR 28 4 281 - -
Bhi09g00226 294 CDD ZnF_GATA 222 277 IPR000679 GO:0006355|GO:0043565
Bhi09g00226 294 ProSiteProfiles CCT domain profile. 146 188 IPR010402 GO:0005515
Bhi09g00226 294 Gene3D - 212 280 IPR013088 GO:0006355|GO:0008270
Bhi09g00226 294 SMART GATA_3 216 269 IPR000679 GO:0006355|GO:0043565
Bhi09g00226 294 ProSitePatterns GATA-type zinc finger domain. 222 249 IPR000679 GO:0006355|GO:0043565
Bhi09g00226 294 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 217 280 - -
Bhi09g00226 294 MobiDBLite consensus disorder prediction 263 294 - -
Bhi09g00226 294 SMART tify_2 78 113 IPR010399 -
Bhi09g00226 294 Pfam CCT motif 146 188 IPR010402 GO:0005515
Bhi09g00226 294 PANTHER GATA TRANSCRIPTION FACTOR 28 4 281 IPR045280 GO:0006355
Bhi09g00226 294 Pfam GATA zinc finger 222 258 IPR000679 GO:0006355|GO:0043565
Bhi09g00226 294 Pfam tify domain 84 112 IPR010399 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01395 Bhi-Chr4:35144633 Bhi09g00226 Bhi-Chr9:4919810 1.12E-72 dispersed
Bhi04g01396 Bhi-Chr4:35144811 Bhi09g00226 Bhi-Chr9:4919810 2.78E-72 dispersed
Bhi05g00918 Bhi-Chr5:32241302 Bhi09g00226 Bhi-Chr9:4919810 1.85E-73 dispersed
Bhi05g00919 Bhi-Chr5:32241302 Bhi09g00226 Bhi-Chr9:4919810 1.85E-73 dispersed
Bhi09g00226 Bhi-Chr9:4919810 Bhi09g00228 Bhi-Chr9:4919810 0 dispersed
Bhi09g00226 Bhi-Chr9:4919810 Bhi09g00227 Bhi-Chr9:4919810 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1802 PF06203 CCT 8.30E-15 CL0281 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00226 - - cmo:103500623 565.844