Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00229 TCAAAATATGTGTTAAAACGGCAAGCGGGGGACATTCAGAGGCACGTCTGTCGCTAGTTTCTAGAACCTTCTTTCTTCTCTCCGAGCTCAATCCGCCGTTGATCCCAATTGGTTTAGATCGCATCTTCAACCCTCCCCTACCCGAGGAGAGATCATCCACCTGAAAAGCAATGTGATCGTCGATCTTCTTCTTTTCAAAGCTACTTCGCACCAGAACAAGGAGATTGCATTCATCGTGTTGCGGATTTTGTGTTCGTCTGTTGGATTATCCACTCCCTTTGATGGCATAAAGAACTTCGAACTTGGTTTTGAACTATCAACTCTATATCCTCTGAGATGGACAGTATTCATGCGAGCGATGGACGGATGCATATTAGCCATGCACAGCATTCGATGCACACACAATCTGTGCAAGACCAGGAACATCATGACTTGCATTATATGAGTAATGGGGATGGATTGGCTGATGAACATGAAAATGAAGGTCATGGTATTATGGTTGGGGAAAGGGAAGTTCAATCGGACCATGGCGATCTTGCCGAGAATCGTGGTGTAATGGTGGATCGAGGTGGCGATAACTGCGACCAGCTCAGCCTGTCTTATCAGGGTCAAGTTTATGTTTTCGATTCCGTCTCGCCCGAAAAGGTTCAAGCCGTGTTATTATTATTGGGAGGTCATGAAGTACCTTTGCGTGTTCCGTCAATCCCAATAACCAATCAACAAAATGATAGGAATCTCACTGATGAAGCGTTTAACCAGGCACTTGCCAATATCCCCCCACGTCTAAGTGTCCCTCAGAGATTAGCTTCTTTGATTAGATTTCGTGAAAAGCGAAAGGAACGAAATTTTGACAAGAAAATTCGGTATACAGTTCGTAAAGAGGTAGCACTTAGGATGCAGCGTAATAAAGGCCAGTTCACATCTTCTAAACCCATTCATGAAGATTCATCATTGGCCATAGCAAGTTGGGAACCAAATGAGGGTTGGAGTAATGATGGAAATGGATCCCAACAACAGGAGATTCTTTGCCGACATTGTGGTATTAGTGAGAAGTCAACACCAATGATGCGACGTGGACCAGATGGGCCAAGAACCCTTTGCAATGCTTGCGGACTCATGTGGGCAAACAAGGGAACTCTCCGGGACCTCTCAAAAGCTCCAAATCAAGGTGGACAAACTGCAACCTTCAATAGAAATGAGAATGCTGTGCAGAATGGAGATTCTGAGTCCAACCCAAATGGTGTTTAGAATTGTGACAGATGTTTATGATTCCTGCTGCAGAATTTAGCAAAAATCATACGTATCTCCTACAGAGATTAGTTTGAAACGGGTTAATCGACATTTGACAGATTTAAAATTTCACTGATGGATATGAATATTCACACCCATCGACAGAGAAACCCTTGTTTATCTTCTAAGCTGGCTAATTCATCTTGGAATCAAGGGCACCGTGTACGCGTACTAATTTATTGGCCTCTTGTTTTATCATACTGCGAACCATTTCAAATTATCAATTCCTAGAATCTTGTAAATTATCATTTCCTGCGGGTGTACAATGGACGTTTTTTTTAAAATCCGATTCTATTTTTGTCCTG 1595 42.82 MDSIHASDGRMHISHAQHSMHTQSVQDQEHHDLHYMSNGDGLADEHENEGHGIMVGEREVQSDHGDLAENRGVMVDRGGDNCDQLSLSYQGQVYVFDSVSPEKVQAVLLLLGGHEVPLRVPSIPITNQQNDRNLTDEAFNQALANIPPRLSVPQRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKPIHEDSSLAIASWEPNEGWSNDGNGSQQQEILCRHCGISEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSKAPNQGGQTATFNRNENAVQNGDSESNPNGV 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4919810 4924670 - XM_039042353.1 Bhi09g00229 42846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00229 303 CDD ZnF_GATA 231 286 IPR000679 GO:0006355|GO:0043565
Bhi09g00229 303 ProSiteProfiles Tify domain profile. 78 113 IPR010399 -
Bhi09g00229 303 Pfam GATA zinc finger 231 267 IPR000679 GO:0006355|GO:0043565
Bhi09g00229 303 Gene3D - 221 289 IPR013088 GO:0006355|GO:0008270
Bhi09g00229 303 PANTHER GATA TRANSCRIPTION FACTOR 28 4 290 IPR045280 GO:0006355
Bhi09g00229 303 ProSiteProfiles CCT domain profile. 155 197 IPR010402 GO:0005515
Bhi09g00229 303 ProSiteProfiles GATA-type zinc finger domain profile. 225 286 IPR000679 GO:0006355|GO:0043565
Bhi09g00229 303 MobiDBLite consensus disorder prediction 273 303 - -
Bhi09g00229 303 ProSitePatterns GATA-type zinc finger domain. 231 258 IPR000679 GO:0006355|GO:0043565
Bhi09g00229 303 PANTHER GATA TRANSCRIPTION FACTOR 28 4 290 - -
Bhi09g00229 303 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 226 289 - -
Bhi09g00229 303 Pfam CCT motif 155 197 IPR010402 GO:0005515
Bhi09g00229 303 SMART GATA_3 225 278 IPR000679 GO:0006355|GO:0043565
Bhi09g00229 303 SMART tify_2 78 113 IPR010399 -
Bhi09g00229 303 Pfam tify domain 84 112 IPR010399 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00227 Bhi-Chr9:4919810 Bhi09g00229 Bhi-Chr9:4919810 0 dispersed
Bhi09g00228 Bhi-Chr9:4919810 Bhi09g00229 Bhi-Chr9:4919810 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1805 PF06203 CCT 8.70E-15 CL0281 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00229 - - cmo:103500623 589.726