Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00238 AAATTTCGCATCTGTGGAACGATAACACTCGGGGACAGTCACAGATCAGTTTCGTGCTCATCCAGCTCGGAGCTCCAATGGATCTCCATTTTCATGGCGATTTTCTGCTTTGCATCTTTTTCTAGAGCTGCCTTTTGGAGATCAATGGATTGGTCATCTCTCACTTACAGATACACAGTCACCACTCCATTTTGGCTGCCATTGCCTTACGCAGATACCTGCATTCAGTTTCAAGCACCAGTCCCACCGTTTTGCTTCTCTATTGTTTCCTAAATTTGGTGCTGTGCCATCTCTCTTGTGACATACTTCAATCTGAGCCGAGCCGAACATGACGTCTCGTGGTTCCTCCGCTTCTGCCAATGGCCTATTACCGCTTACCGTTTCCACGTCCGGCCGCCACCACGATGTTGAGTCTGGGCTCTCATCCAGCAAAAGCATCGACGAGGAGGAAGAAGAGGCTGTATTGGATCCCTTCGACATCGACAATACCAAAAATGTGCCTCTTGAGATACTCAAGCGTTGGAGGCAAGCTGCATTGGTGCTTAATGCATCTCGGAGATTTCGATATACTTTGGACTTAAAAAAGGAGGAAGAGAAAGAACAAAGAAGACGGATGATTAGAGCCCATGCACAAGTCATAAGGGCAGCACTGCTTTTCAAATTGGCAGGGGAGCAACAAATTGGTTCATCAGTATCATCTCCAGAGTCAAGTGGTGACTATTCCATTAGCTTAGAACAGCTTGCTTCATTGTCTCGTGATCAAAATTTGTCTTCTCTTCAACAGTATGGAGGAGTTAAAGGCTTATCAAATTTATTGAAAACAAGTACCGAGAAAGGAATATCGGGAGATGAAACTGATTTACTTATTAGAAGAAATGCATTTGGATCAAATACATATCCACGTAAAAAAGGACGGAGTTTCTTGAGATTTCTTTGGGAAGCTTGGCAAGATTTAACCCTAATCATCTTGATTATAGCTGCAGTGGCATCTTTGGCTTTGGGGATTAAAACAGAGGGTTTAGAGGAAGGATGGTATGATGGAGGAAGTATTGCCTTTGCTGTGTTTCTTGTCATAATAGTCACAGCGGTTAGTGATTATCGACAGTCTCTTCAGTTTCAGAACTTAAATGAGGAAAAACAGAACATACAAGTAGAGATCTTGAGGGATGGTAGGACTTTAAAGGTCTCAATATTTGACCTTGTTGTTGGGGATGTTGTAACTCTTAAAATTGGAGATCAGATCCCTGCTGATGGAATATTGATCACTGGTCATTCACTTGCCATAGATGAATCTAGCATGACTGGCGAAAGCAAGATTGTTCGCAAGGATCAGAAGGCACCCTTTTTGATGTCTGGTTGTAAGGTTGCAGATGGAGTTGGTACCATGATGGTAACTGCTGTTGGAATCAATACTGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGGGAAGAAACTCCCTTGCAGGTCCGGTTGAATGGAGTTGCAACTTTCATAGGCATAGTTGGGCTTGCGGTTGCAGTTTCTGTGCTAGCCGTTCTTTTGGGCAGATACTTTACGGGAAATACACACGATGCAAATGGGAACCCTGAATTTCAACGTGGGCATACGAGTCTAGGTGATGCTGTAGATGGAGTTATTAAAATTGTTACTGTTGCTGTTACCATTGTGGTGGTTGCAGTACCCGAAGGACTTCCTTTGGCTGTCACCCTAACATTAGCATACTCCATGAGGAAAATGATGGCTGATAAAGCATTGGTTCGTAGGCTGTCTGCTTGTGAAACTATGGGCTCTGCAACAACAATATGCAGTGACAAGACTGGAACGTTGACTTTAAATCAGATGACTGTGGTCGAGGCATGTGTTGGAAAGAAAATGATTAATCCCCCAGATGATCCACTGCAATTGCATTCGATGGTACTCATTCTGCTACATGAGGGCATTGCTCAGAACAGCACGGGCAATGTTTTTGTGGCTAAGGATGGTGAAGGTATAGAGGTCTCTGGATCTCCTACAGAAAAGGCTATTTTATCTTGGGCTGTAAAGCTAGGAATGAAGTTTGATGTTGTCAAATCAGAGTCCAAAGTTCTCCATGTTGTCCCTTTCAATTCAGAAAAGAAGCGAGGTGGTGTTGCAATAAAGCGGGCCAACTCAGAAGTTTGCATACATTGGAAAGGAGCGGCAGAGATGGTGTTATCTTCATGTACGAAGTATGTGGACTTGAATGGTGAAGTGCACTCAATTGAGGACAATGAGGATTATTTTAAGGCAGCTATTAGTGACATGGCTGCAAGAAGTTTGCGTTGTGTTGCCATTGCATATAGATCATATGAATTGGAGAAGATTCCAATAGATGAACAGCGTTTGGATCAATGGGATTTGCCTGCTGATGACCTTATTTTACTTGCAATTGTTGGTATAAAGGATCCTTGTCGCGACGGTGTTAAAGAGGCTGTTAAAGTGTGCACGGATGCAGGTGTCAAGGTGCGCATGGTCACTGGAGACAATATACAGACTGCAAAAGCTATAGCAGTAGAGTGTGGAATACTAAACGCAACTGAAGATGCTTCCGAGCCTACAGTAATTGAAGGAAAAACATTCCGTGTCTTGTCTGAGAAGGAAAGAGAACAAGTTGCCCCAAAAATAACGGTGATGGGGAGGTCTTCACCTAATGACAAGCTCTTGCTTGTTCAAGCATTAAGAAAGGGAGGGGATGTTGTTGCTGTAACTGGAGATGGGACTAATGATGCCCCTGCACTCCATGAGGCAGATATCGGTCTTTCTATGGGCATTCAAGGTACCGAAGTTGCTAAAGAGAGTTCTGATATTGTTATCTTGGACGATAACTTTGCTTCAGTTGTAAAGGTTGTCAGGTGGGGGCGTTCTGTGTATGCAAACATTCAAAAGTTCATCCAGTTTCAGCTCACTGTAAATGTTGCCGCTCTTGTGATCAATGTCGTTGCAGCTGTGTCTTCCGGTGATGTTCCTTTAAATACTGTGCAGCTTCTTTGGGTTAACCTGATCATGGATACACTTGGTGCTCTAGCATTAGCCACTGAACCACCAACAGACCACCTGATGCATCGGTCACCTGTTGGGCGAAGGGAACCCCTTATAACGAATATTATGTGGAGGAATTTGATTGTACAGGCTTTATATCAAGTCGCTGTACTTCTTGTTCTCAACTTCTACGCCACTGATATTCTTCAATTGAATAGTGATACCAAGGAGCATGCCTTTAATGTGAAGAATACAGTGATTTTCAATGCATTTGTCCTCTGCCAAATATTCAACGAATTTAATGCTCGAAAACCAGATGAAATGAACGTGTTCAGTGGAGTGACAAAAAATTATCTCTTTATGGGAATAGTTGGAACGACGTTCGTGCTTCAGATTTTGATCGTCGAATTTGCTGGAAAATTTACTTCGACAGTAAAACTTGATGGGAAACAATGGGTTATATGCTTCGCTGTCGCCCTTGTGAGTTGGCCGCTGGCGGTTGTTGGCAAACTGATTCCAGTTCCGGAGACCCCATTGGCTAAATACTTCACAAAGTCAGTTCAACGATGCAGAAGGTCACGTGGTGCTTAATTTTGGGATTTTTTTTCCTTAAAATAGCATTATTTTGAAAGACAGTTCATAATTTAGTATCTCTAGGTTTTAAAATATACTTTTAATCTCTATAATCTGGATTTTTATTTTATCTGTTATAATTTAGTCATCATACTCTAATAAATATAACAGTCAAGTCCTAAAGTTAAAACTTTCTAGAAAAATCTTTGTATGAGATATATGAGCAAGAAGTCAACAAAGCATATGGATTTCTTAAATTCAAATTAAAAGTGATTTCATTATTTACTCATTCATGACTTGGATTAAGTTTTTAACGTCAAGGACTTGATTGTTACGTTTTTAAAGTATGGACTAAATTGTTGCCATAAAAAAAGAAAGGAAAAAAAAAAGAGAAAAAAAAGAGTATACATTAAAACCAAAATATTACCCGTTCCAAAGTTTTGAGGACTAAATATAAATTTTTCTCAGAGATGATGCATTTTAGAAAGCAAAATCACTTTTCTTGTGTTGATTTCATGACATTTAAAATGCAATAAAACTGAACTGTTTGGACGTTATCTCTTATGAACAGTGAAACTTCATCTTGTTCTTGAAGATATGAAATCATTTTTAACCATAATGATTATTGAAGATGTAAAATCATGTCATTTTGTTCACAATGTTTCATAATTACTTTTGAGGGCCGTGCTATTTTTAGAATTGTTCCTCTTAATAATGCTGTTTTTTGAGAAGAATCCCATAATTTTTCTCCATTACTAGCTTGCTCAAAAGTTCAGTTATAATAATGAATGTCACAGCAGATATAAAGATATGTGCTGAAGGTTACTCATCAGACTGCTTGTAAATATTACCTCTGCCAAATGTATCTTTACTAACCCAGGAGATAAAGCGTAATTGTAAATTTTACTCCATACTTTTTACAGTATATTGCTTTTTTCTTTTTTTTTTTCGTTTTTATTATTTTATGGTAATTGTAATGTTTAAGGTTGATGATGAATACTCATAGTGATGTTCTCTGAAGTTTGGAGGAAGAATTTCCAGATTGTGAACAATTTTATATATTTACCTCTTATGTATCTTTCAATGTCAATGTGGCTACTATGGTTGGATTTGGAAA 4697 39.62 MTSRGSSASANGLLPLTVSTSGRHHDVESGLSSSKSIDEEEEEAVLDPFDIDNTKNVPLEILKRWRQAALVLNASRRFRYTLDLKKEEEKEQRRRMIRAHAQVIRAALLFKLAGEQQIGSSVSSPESSGDYSISLEQLASLSRDQNLSSLQQYGGVKGLSNLLKTSTEKGISGDETDLLIRRNAFGSNTYPRKKGRSFLRFLWEAWQDLTLIILIIAAVASLALGIKTEGLEEGWYDGGSIAFAVFLVIIVTAVSDYRQSLQFQNLNEEKQNIQVEILRDGRTLKVSIFDLVVGDVVTLKIGDQIPADGILITGHSLAIDESSMTGESKIVRKDQKAPFLMSGCKVADGVGTMMVTAVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLAVAVSVLAVLLGRYFTGNTHDANGNPEFQRGHTSLGDAVDGVIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEACVGKKMINPPDDPLQLHSMVLILLHEGIAQNSTGNVFVAKDGEGIEVSGSPTEKAILSWAVKLGMKFDVVKSESKVLHVVPFNSEKKRGGVAIKRANSEVCIHWKGAAEMVLSSCTKYVDLNGEVHSIEDNEDYFKAAISDMAARSLRCVAIAYRSYELEKIPIDEQRLDQWDLPADDLILLAIVGIKDPCRDGVKEAVKVCTDAGVKVRMVTGDNIQTAKAIAVECGILNATEDASEPTVIEGKTFRVLSEKEREQVAPKITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLIVQALYQVAVLLVLNFYATDILQLNSDTKEHAFNVKNTVIFNAFVLCQIFNEFNARKPDEMNVFSGVTKNYLFMGIVGTTFVLQILIVEFAGKFTSTVKLDGKQWVICFAVALVSWPLAVVGKLIPVPETPLAKYFTKSVQRCRRSRGA 1089
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5106280 5128902 + XM_039042840.1 Bhi09g00238 42855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00238 1089 Pfam Cation transporting ATPase, C-terminus 888 1065 IPR006068 -
Bhi09g00238 1089 PRINTS P-type cation-transporting ATPase superfamily signature 320 334 - -
Bhi09g00238 1089 PRINTS P-type cation-transporting ATPase superfamily signature 496 510 - -
Bhi09g00238 1089 PRINTS P-type cation-transporting ATPase superfamily signature 696 707 - -
Bhi09g00238 1089 PRINTS P-type cation-transporting ATPase superfamily signature 718 728 - -
Bhi09g00238 1089 PRINTS P-type cation-transporting ATPase superfamily signature 803 822 - -
Bhi09g00238 1089 PRINTS P-type cation-transporting ATPase superfamily signature 827 839 - -
Bhi09g00238 1089 PRINTS Sodium/potassium-transporting ATPase signature 239 259 - -
Bhi09g00238 1089 PRINTS Sodium/potassium-transporting ATPase signature 489 510 - -
Bhi09g00238 1089 PRINTS Sodium/potassium-transporting ATPase signature 615 633 - -
Bhi09g00238 1089 PRINTS Sodium/potassium-transporting ATPase signature 875 896 - -
Bhi09g00238 1089 MobiDBLite consensus disorder prediction 1 43 - -
Bhi09g00238 1089 SFLD p-type atpase 478 855 IPR044492 -
Bhi09g00238 1089 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 89 IPR024750 GO:0005516
Bhi09g00238 1089 SUPERFAMILY Calcium ATPase, transduction domain A 273 369 IPR008250 -
Bhi09g00238 1089 SUPERFAMILY HAD-like 494 908 IPR036412 -
Bhi09g00238 1089 SMART Cation_ATPase_N_a_2 152 226 IPR004014 -
Bhi09g00238 1089 SFLD Haloacid Dehalogenase 478 855 - -
Bhi09g00238 1089 Gene3D - 204 1058 - -
Bhi09g00238 1089 ProSitePatterns E1-E2 ATPases phosphorylation site. 498 504 IPR018303 -
Bhi09g00238 1089 Pfam Cation transporter/ATPase, N-terminus 154 221 IPR004014 -
Bhi09g00238 1089 MobiDBLite consensus disorder prediction 1 27 - -
Bhi09g00238 1089 Gene3D - 59 112 - -
Bhi09g00238 1089 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 141 1067 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bhi09g00238 1089 PANTHER CATION TRANSPORTING ATPASE 33 1081 - -
Bhi09g00238 1089 SUPERFAMILY Calcium ATPase, transmembrane domain M 153 1067 IPR023298 -
Bhi09g00238 1089 Gene3D - 506 703 IPR023299 GO:0000166
Bhi09g00238 1089 Pfam E1-E2 ATPase 272 474 - -
Bhi09g00238 1089 Gene3D - 493 848 IPR023214 -
Bhi09g00238 1089 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 436 523 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi09g00238 1089 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 770 883 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi09g00238 1089 Pfam Cation transport ATPase (P-type) 553 630 - -
Bhi09g00238 1089 Gene3D - 180 372 - -
Bhi09g00238 1089 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 503 700 IPR023299 GO:0000166
Bhi09g00238 1089 PANTHER CALCIUM-TRANSPORTING ATPASE 33 1081 - -
Bhi09g00238 1089 CDD P-type_ATPase_Ca_PMCA-like 181 936 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01457 Bhi-Chr5:50761420 Bhi09g00238 Bhi-Chr9:5106280 9.91E-112 dispersed
Bhi05g01458 Bhi-Chr5:50769578 Bhi09g00238 Bhi-Chr9:5106280 5.99E-104 dispersed
Bhi06g01190 Bhi-Chr6:34195034 Bhi09g00238 Bhi-Chr9:5106280 0 dispersed
Bhi06g01191 Bhi-Chr6:34195034 Bhi09g00238 Bhi-Chr9:5106280 0 dispersed
Bhi09g00238 Bhi-Chr9:5106280 Bhi12g01458 Bhi-Chr12:47171505 0 dispersed
Bhi09g00238 Bhi-Chr9:5106280 Bhi09g00239 Bhi-Chr9:5106281 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00238 K01537 - csv:101214801 1918.28