Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00252 TGGAGACAGCCTTTTTTTGTGTGGGTTTTGATTCTTCCTGGCTAATCGTGGCTGCCAGCTTCACTTGAGCGTGGCTGTACAGAGTATTAAAAATTAGATAAACGAGTATTTACGAGTTTCACAGAAAGCGAGAGAGGGAGTGAGATTGATTGAGGAAAAGAGGGTGGTTGATTTGAGGCTCTCAATCCTGTTCAGGGCAGAGGGAGGCGAGGTTCGGAAAAGGATGGATTGGAGATGGAGGGAGCTCATCTCTCTCATCATTCTTTGCGTTCTAGGGTGGAAGCCTAGCTGCATTCAAGGAACCACAGATCCAACAGATGTTAACCCAGTGGAACGCAAATGGTGATGATCCTTGTGGACAATCATGGAAGGGGATTACTTGCTCCGGCTCACGGGTTACGGAAATAAATTTATCTGGCCTTGGACTCAGTGGATCGCTTGGATACCAGCTTGGAAGTATGACATCGGTAACCAACCTGGATGTGAGTAATAACAATCTTGGAGGCGAGATTGTCTACAACCTTCCACCTAACCTGAAAAGACTAAATCTTGGACGAAACAACTTCAATAAAGGCATCCCTTATTCCATTTCCTTGATGACTTCTCTTCAATACTTAAATATCAGTCATAATCAGCTTCAGGAACCACTGAATGATGTGTATGGGCAGCTAACTTCCCTATCCACATTGGATTTGTCTTTCAATGCTATGCCAGGCAACCTGCCTCAGAGTTTTAGCTCTCTTTCTGGCATCAGCTCTATGTATTTGCAAAACAATCAGTTCACCGGCACAATTGATGTTCTTGCAACTCTTCCTCTTGATAACCTGAATGTTGAAAATAACCGTTTCACTGGATGGATCCCTGAACCACTGAAGAACATCAACCTGCAGAAAAATGGCAACAACTGGAACTCCGGTCCTGCACCCCCTCCTCCACCTGGTACACCCCCAGCCACCAGAAGACCCCGCAATCGCAACTCAGGTGGCAGTCCATCAAATGGTGGTTCTAGTGAAGATCAGAAATCAGGAATTAGTGGTGGTGCCATTGCAGGAATTATCATTTCTGTGCTCGTTGTTGGAGCTGTAGTAGCATTCTTCCTCGTCAGGAGGAGATCCAAGAGATCATCCACAGATATTGAAAAGCTCGACAATCAACCCCTGCAACCTCTGAAAATGACTGCAGCACAAGAAACAAAGTCGGAAGAGACTTCCTCCACATTTTATCCAACATCATTTGACACTTCTGCTACAATTAATCTCAAACCCCCACCTATTGATCGTCATAAATCATTTGATGAAGACGACTTCTCAAAACGAGCCGCAGTCAAGAAGGCTAGTGCTGCAGCTCCCATTAATGTAAAGTCATATTCAATAGCAGACCTTCAAATGGCTACAGGCAGCTTCAATGTTGAAAATCTTCTTGGTGAGGGATCGTTTGGACGTGTATATCGGGCCGAGTTTGATGACGGGAAGGTTCTTGCAGTGAAAAAAATAAATTCATCTGCACTACCGAGGGAATTATCTGAAGATTTCACTGACATTGTTTCTAAAGTCTCTCAGTTACACCATCCCAATATAACTGAACTCGTGGGTTATTGCTTAGAGCATGGGCAATATTTGCTTGTGTATGAGTTCCACAAAAATGGCTCGCTTTATGACTTCTTACATCTATCAGATGAATACAACAAACCTCTGATATGGAATTCACGTGTTAAGATTGCTTTGGGAACAGCACGTGCGTTAGAGTATCTTCATGAAGCGTGCTCCCCATCAATTGTTCATAGAAACGTCAAGTCTGCTAACATATTGCTGGATGCCGAACTCAGCCCCCACCTTTCTGATTCTGGACTGGAAAGCTTTGTACCAAATGCAGATCAGGCAGTGGATGGGAGTGCAAGTTCAGGATATGCTGCCCCGGAGGTTACCATGTCCGGTCAATATACTGTGAAAAGCGACGTCTACAGTTTTGGAGTAGTCATGTTGGAACTGCTAACTGGACGTAAACCATTCGATAGTTCAAGGCCGAGGTTGGAGCAATCTTTGGTTCGATGGGCAACACCTCAGCTTCATGACATTGATGCTTTGACCAAGATGGTTGATCCCGAACTCAAAGGTCTTTATCCCGTTAAATCTCTCTCCCGATTTGCAGATGTGATTGCACTTTGTGTACAGACGGAACCTGAGTTCAGACCTCCAATGTCAGAGGTGGTGGAAGCGTTGGTCCGTTTGGTGCAACGAGCAAACATGAGTAAGAGAACATATGGAAACGATAATGCAACATCTCCGAGAGGTGAAATGGGTGGGGAGGACACGCCATAAACAACAGAGACACGTTTGTAAGGCCAAAATCTTACCTTCTTCTTGGTAATTCTTTCTTAATATAGAAAGAGGAGGCGGAAACCAGGAATTGCTATCTAATGGCGATAATAATGTTTGTCTGTTAATATTACACGTTTGATGTTTAGGTCTTCATATTCCATAGGTTTTTTTTTAGTATTTTGATAGAAATCAGTAAAATACTCCCTTCATTTTCAACATACATTTATTCTGAAGAAATAATTGGCGGTGATTACTGTATGAACATCTGTTGTATTCTACTTGCTGTTTTTGATTATTAATTTATTATTTATTGTTTGAAA 2638 42.99 MLTQWNANGDDPCGQSWKGITCSGSRVTEINLSGLGLSGSLGYQLGSMTSVTNLDVSNNNLGGEIVYNLPPNLKRLNLGRNNFNKGIPYSISLMTSLQYLNISHNQLQEPLNDVYGQLTSLSTLDLSFNAMPGNLPQSFSSLSGISSMYLQNNQFTGTIDVLATLPLDNLNVENNRFTGWIPEPLKNINLQKNGNNWNSGPAPPPPPGTPPATRRPRNRNSGGSPSNGGSSEDQKSGISGGAIAGIIISVLVVGAVVAFFLVRRRSKRSSTDIEKLDNQPLQPLKMTAAQETKSEETSSTFYPTSFDTSATINLKPPPIDRHKSFDEDDFSKRAAVKKASAAAPINVKSYSIADLQMATGSFNVENLLGEGSFGRVYRAEFDDGKVLAVKKINSSALPRELSEDFTDIVSKVSQLHHPNITELVGYCLEHGQYLLVYEFHKNGSLYDFLHLSDEYNKPLIWNSRVKIALGTARALEYLHEACSPSIVHRNVKSANILLDAELSPHLSDSGLESFVPNADQAVDGSASSGYAAPEVTMSGQYTVKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALTKMVDPELKGLYPVKSLSRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTYGNDNATSPRGEMGGEDTP 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5337922 5343673 + XM_039043096.1 Bhi09g00252 42869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00252 666 MobiDBLite consensus disorder prediction 646 666 - -
Bhi09g00252 666 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Bhi09g00252 666 PANTHER OS01G0253100 PROTEIN 2 659 IPR045271 GO:0004714|GO:0006468
Bhi09g00252 666 Gene3D Phosphorylase Kinase; domain 1 325 439 - -
Bhi09g00252 666 Pfam Leucine Rich repeat 49 67 IPR001611 GO:0005515
Bhi09g00252 666 SUPERFAMILY Protein kinase-like (PK-like) 345 634 IPR011009 -
Bhi09g00252 666 MobiDBLite consensus disorder prediction 199 213 - -
Bhi09g00252 666 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 2 659 - -
Bhi09g00252 666 SUPERFAMILY L domain-like 6 187 - -
Bhi09g00252 666 MobiDBLite consensus disorder prediction 191 237 - -
Bhi09g00252 666 CDD STKc_IRAK 368 637 - -
Bhi09g00252 666 Pfam Leucine rich repeat N-terminal domain 2 23 IPR013210 -
Bhi09g00252 666 ProSiteProfiles Protein kinase domain profile. 362 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g00252 666 Pfam Protein tyrosine and serine/threonine kinase 364 634 IPR001245 GO:0004672|GO:0006468
Bhi09g00252 666 Gene3D Transferase(Phosphotransferase) domain 1 441 656 - -
Bhi09g00252 666 MobiDBLite consensus disorder prediction 214 237 - -
Bhi09g00252 666 Gene3D Ribonuclease Inhibitor 1 205 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02818 Bhi-Chr1:69979184 Bhi09g00252 Bhi-Chr9:5337922 0 dispersed
Bhi08g00819 Bhi-Chr8:27539852 Bhi09g00252 Bhi-Chr9:5337922 0 dispersed
Bhi09g00250 Bhi-Chr9:5337922 Bhi09g00252 Bhi-Chr9:5337922 0 dispersed
Bhi09g00251 Bhi-Chr9:5337922 Bhi09g00252 Bhi-Chr9:5337922 0 tandem
Bhi09g00252 Bhi-Chr9:5337922 Bhi09g00253 Bhi-Chr9:5337923 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88060 PF07714 PK_Tyr_Ser-Thr 1.00E-43 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00252 - - csv:101213107 1142.49