Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00262 TTTCCACCACCTCACGCCTTCTCCCACAAATCAAATGAAACACTCCGATACCATGGAGAAACCCATCGCCGCCGGAATTTCAAATTCCGGCAACCACCCTCAAAACCCCAAAAACAAATCAAGAAAGCTTCTAATCTTAGCCATCTCCTCCACCCTCCTCCTCGTCGGCGCCGCCGTCGGCATCGTCGCCGGAGTGACGACGAAATCGAAAAATTCCGGGAAATCACATGCCATTGTGAAGAGCACGTGCAGCAGCACGCTTTACCCAGATCTGTGCTTTTCTACAATTTCGAAAAGTGAAGGGGCAATGGAGAAAGTTGGGAATCAAAAGGATGTGATCGAGCTGTCGATTAATATTACGGTGAAAGCTGTGGAAGAAAATTATTTTAAAGTGAAGAAATTGTGTGGATTGAAAAATATTAGCCATAGGGAAAAAATTGCTCTTCATGATTGTCTCGAAACCATTGACGAAACGCTTGATGAACTTCATAAAGCTATTGTGGATCTTCATGAATACCCAAATAAAAAATCTCTTAACCAACATGCTGATGATCTCAAGACCTTGCTTAGCTCTGCCATTACAAATCAAGGGACATGCCTGGACGGTTTTTCGCACGACCGAGGCCGACAAAAACCTGCGGGAAAAGCTAAAAGAGGACAAGTGGAAGTGGAACACATGTGCAGCAACGCATTAGCCATGATCAAGAACATGACCGATACAGACATAGCCAACTACGAGGCTAAAATGGAACAACTAAAAACAGAAAACTCATGGCGGAGGAACAGAACAACGACGACGAACAGCCATCAGTGGCCGGAGTGGCTGTCGGCCGGAGACCGGCGACTTCTGCAGTCGTCATCTGTGAATCCTGACGTAGTCGTGGCGGCGGACGGCAGCGGGAACTTCCGGACGGTGGCGGCCGCCGTGGCGGCGGCGCCGGTGAAAAGTAGCAAAAGATATGTGATAAGAATTAAAGCAGGGGTTTATAGAGAGAATGTGGAAGTGCCGAAGAAGAAGACGAATATAATGTTTATGGGAGATGGAAGAAGTAACACTATAATTACCGGTAGCCGGAATGTTGTCGACGGCAGCACCACTTTTAAGTCTGCAACTGTCGCTGCGGTAGGAGAAGGATTTTTAGCGCGTGACATCACGTTCCAAAACACCGCCGGTCCCTCAAAGCACCAAGCGGTGGCTCTCCGTGTCGGAGCAGATCTCTCCGCCTTCTACCAATGCGACATGTTAGCTTATCAAGACACTCTCTACGTCCATTCCAACCGTCAATTCTACATCAACTGTCTCATCTCCGGCACCGTCGATTTCATCTTCGGCAACGCCGCCGTCATTTTCCAAGACTGTGACATTCACGCGCGTAGACCAAACTCCGGTCAGAAAAACATGGTCACGGCCCAAAGCCGGTCCGACCCGAACCAAAACACGGGTATCGTTATCCAGAAATCCCGAATCGGTGCCACGTCAGATCTGCGGTCGGTTCAGAAGAACTTCCCCACGTTTCTGGGAAGGCCGTGGAAGGAATATTCTAGAACCGTGATTATTCAGTCAACGATTAGTGACGTCATTGACCCGAAGGGATGGCACGAGTGGAGCGGTAATTTTGGTTTGAACACGTTGTTTTACGGTGAGTATCAGAATACTGGACCGGGGGCTTCGACCGGGGGGAGGGTGACGTGGAAGGGATTTAGGGTAATTCAGAGTGCCACGGAGGCTGAAGGTTTTACCGCGGGTAAATTTATTGGCGGTGGGAGTTGGTTGCGTTCTACTGGATTTCCTTTCTCTCTAGGATTATGATAATAATGTGGTTTTTAACTTGATTTTTGTGATCGGCTATTCATTGTGGTAAATTTTTTTTTTTTAAATATTATTGTGTAATGTCGAATTACAATGATTGGGTGAGAGTGTAAGTTTGGTAAAAGCAATAATAATTACCAATGAGGAGCCTGTGTTCACATTAACTAA 1978 47.17 MKHSDTMEKPIAAGISNSGNHPQNPKNKSRKLLILAISSTLLLVGAAVGIVAGVTTKSKNSGKSHAIVKSTCSSTLYPDLCFSTISKSEGAMEKVGNQKDVIELSINITVKAVEENYFKVKKLCGLKNISHREKIALHDCLETIDETLDELHKAIVDLHEYPNKKSLNQHADDLKTLLSSAITNQGTCLDGFSHDRGRQKPAGKAKRGQVEVEHMCSNALAMIKNMTDTDIANYEAKMEQLKTENSWRRNRTTTTNSHQWPEWLSAGDRRLLQSSSVNPDVVVAADGSGNFRTVAAAVAAAPVKSSKRYVIRIKAGVYRENVEVPKKKTNIMFMGDGRSNTIITGSRNVVDGSTTFKSATVAAVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYQCDMLAYQDTLYVHSNRQFYINCLISGTVDFIFGNAAVIFQDCDIHARRPNSGQKNMVTAQSRSDPNQNTGIVIQKSRIGATSDLRSVQKNFPTFLGRPWKEYSRTVIIQSTISDVIDPKGWHEWSGNFGLNTLFYGEYQNTGPGASTGGRVTWKGFRVIQSATEAEGFTAGKFIGGGSWLRSTGFPFSLGL 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5502512 5509185 + XM_039042039.1 Bhi09g00262 42879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00262 591 SMART PMEI_2 63 222 IPR006501 GO:0004857
Bhi09g00262 591 CDD PMEI-like_3 70 227 - -
Bhi09g00262 591 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Bhi09g00262 591 SUPERFAMILY Pectin lyase-like 276 590 IPR011050 -
Bhi09g00262 591 MobiDBLite consensus disorder prediction 193 208 - -
Bhi09g00262 591 Coils Coil 224 244 - -
Bhi09g00262 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 227 IPR035513 -
Bhi09g00262 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 227 IPR035513 -
Bhi09g00262 591 MobiDBLite consensus disorder prediction 1 26 - -
Bhi09g00262 591 Pfam Pectinesterase 280 576 IPR000070 GO:0030599|GO:0042545
Bhi09g00262 591 Gene3D - 274 591 IPR012334 -
Bhi09g00262 591 PANTHER PECTINESTERASE 29 590 - -
Bhi09g00262 591 MobiDBLite consensus disorder prediction 11 26 - -
Bhi09g00262 591 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 226 IPR006501 GO:0004857
Bhi09g00262 591 PANTHER PECTINESTERASE 29 590 - -
Bhi09g00262 591 Pfam Plant invertase/pectin methylesterase inhibitor 67 222 IPR006501 GO:0004857
Bhi09g00262 591 MobiDBLite consensus disorder prediction 189 208 - -
Bhi09g00262 591 ProSitePatterns Pectinesterase signature 1. 305 324 IPR018040 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g02828 Bhi09g00262 CCT
Bhi01g02828 Bhi09g00262 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00262 Bhi-Chr9:5502512 Bhi09g00921 Bhi-Chr9:20518623 1.79E-173 dispersed
Bhi12g02036 Bhi-Chr12:63545398 Bhi09g00262 Bhi-Chr9:5502512 3.95E-136 dispersed
Bhi12g00925 Bhi-Chr12:27823274 Bhi09g00262 Bhi-Chr9:5502512 9.14E-148 transposed
Bhi01g02828 Bhi-Chr1:70160086 Bhi09g00262 Bhi-Chr9:5502512 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00262 K01051 - csv:101212388 972.23