Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00364 AGCCTTCACAAAATTTTCCCTCTTTCGCTCGCTGCGCTTTGCCCAAACACTCGCCTCCAACTCCACGGATCAGATCCGAAGAGTTTGGCAAACCCTAGCTTCCTTTCTTCAATCTCCATCTCTTTCATCCTCCTCTTTCTTCTCTAACAATCCCCAGCCATGGCAGGTTTAGCTCCAGAAGGAACCCAGTTTGATTCTCGTCAATATGATGCTAAAATGAATGAGATTCTTTCAGCCGAAGGGCAGGAATTTTTTACCTCATATGATGAAGTTTATGAAAGTTTTGATTCGATGGGGCTGCAAGAAAACCTCCTTAGAGGCATTTATGCCTATGGTTTTGAGAAACCATCTGCAATTCAACAAAGAGGTATTGTTCCCTTCTGCAAAGGCCTCGATGTGATTCAGCAGGCTCAATCTGGAACTGGGAAGACTGCAACCTTCTGCTCTGGGATACTTCAGCAACTTGATTATGGTTTGATCCAGTGCCAGGCATTAGTTTTGGCGCCGACTAGGGAGCTGGCTCAACAAATTGAGAAGGTTATGAGAGCTCTTGGAGATTATCTTGGTGTTAAGGTTCATGCTTGTGTAGGAGGGACAAGCGTCCGTGAGGATCAACGCATTCTTCAAGCTGGTGTTCACGTAGTAGTTGGAACACCTGGTCGTGTGTTTGACATGTTAAGGAGGCAGTCTCTTCGCCCAGATTGTATTAAGATGTTTGTATTGGATGAAGCTGATGAGATGCTTTCTCGAGGTTTCAAAGATCAGATCTATGACATTTTCCAGCTGTTGCCATCAAAAATTCAAGTAGGTGTATTCTCGGCCACAATGCCACCGGAAGCTTTGGAGATCACTAGGAAATTCATGAACAAGCCTGTCAGAATCTTGGTAAAACGTGATGAGCTTACTTTGGAAGGTATCAAACAATTTTACGTAAATGTTGATAAGGAAGATTGGAAGCTCGAAACTCTGTGTGATCTCTACGAGACTCTGGCTATCACTCAAAGTGTTATCTTCGTTAACACACGTCGTAAGGTCGATTGGCTTACAGACAAGATGAGAAGCCGGGACCATACTGTATCAGCCACCCATGGTGACATGGACCAGAACACTCGAGATATAATCATGCGTGAATTTCGGTCTGGCTCATCTCGTGTTCTTATCACAACTGACTTATTAGCTCGTGGTATTGATGTTCAGCAAGTCTCCCTTGTGATAAATTATGATTTGCCAACCCAACCAGAAAATTACCTTCATCGAATTGGTCGAAGTGGGCGTTTTGGAAGAAAGGGTGTTGCCATCAATTTTGTTACAAGTGATGATGAGAGAATGCTTTTTGATATTCAGAAGTTCTATAATGTGGTCATCGAGGAGCTGCCAGCCAATGTAGCAGATCTCCTATGATGAGGTTTTTGTTTGTTTTTTTTTTTTGGTTTTGTTTTTTTGTTTTTGTTTATAGGGATGGGATTTTCTCTTATCTCTGAATGACACTATTTAGCCTCCCCCCACTGGAACTCTTTTCTATTATCTTCACTTTGTTTTCATATATTAGTTCTGTCAAACTGACATTTTGTTAATGATTTATTGTCTGCTTTCTGTGCAA 1600 42.06 MAGLAPEGTQFDSRQYDAKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLFDIQKFYNVVIEELPANVADLL 413
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 7599653 7602394 + XM_039043309.1 Bhi09g00364 42981
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00364 413 PANTHER EUKARYOTIC INITIATION FACTOR 4A-2 23 413 - -
Bhi09g00364 413 CDD DEADc_EIF4A 45 242 - -
Bhi09g00364 413 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 252 413 IPR001650 -
Bhi09g00364 413 CDD SF2_C_DEAD 253 383 - -
Bhi09g00364 413 Gene3D - 30 248 IPR027417 -
Bhi09g00364 413 PANTHER RNA HELICASE 23 413 - -
Bhi09g00364 413 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 40 68 IPR014014 GO:0003724
Bhi09g00364 413 SMART ultradead3 59 256 IPR014001 -
Bhi09g00364 413 Pfam Helicase conserved C-terminal domain 266 374 IPR001650 -
Bhi09g00364 413 SMART helicmild6 293 374 IPR001650 -
Bhi09g00364 413 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 187 195 IPR000629 -
Bhi09g00364 413 Gene3D - 249 413 IPR027417 -
Bhi09g00364 413 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 71 241 IPR014001 -
Bhi09g00364 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 394 IPR027417 -
Bhi09g00364 413 Pfam DEAD/DEAH box helicase 65 226 IPR011545 GO:0003676|GO:0005524
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02739 Bhi-Chr1:67420416 Bhi09g00364 Bhi-Chr9:7599653 0 dispersed
Bhi03g01849 Bhi-Chr3:39299992 Bhi09g00364 Bhi-Chr9:7599653 2.88E-12 dispersed
Bhi04g00968 Bhi-Chr4:24190885 Bhi09g00364 Bhi-Chr9:7599653 1.04E-76 dispersed
Bhi04g00969 Bhi-Chr4:24190885 Bhi09g00364 Bhi-Chr9:7599653 1.04E-76 dispersed
Bhi09g00364 Bhi-Chr9:7599653 Bhi11g01299 Bhi-Chr11:38366572 0 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00364 K03257 - csv:101221456 816.994