Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00406 TTTACATCTTCAAAGTACAATTACCAATATTTTGTTGCATTATATAGCCTTTGGCTTTGGACATTTTTCCTTCCATTCCCATCTATAAAAACCAAACCTTTCTTCTATTTTCCAGAAAATGACATTGAATTCTATTTCTCCATAGCCATTTCAAGTTTCTTCATCATTTTCCAAATTAAGAAAGAGTTGGTTAGAGTTGTGCCAGAATGTACAAAAGGACTTTAAATAGCTGAAGGAAAGTTTCCAACTTTTATTCCCCTATTCAAAAAGCTTGAAATAAGATCAATCTTTTTCGTTTTTCGTCATCGGTTCGGAATTTGAGCTGATAATGGATCATTTGATCTGGAATGGATATGGATCAAGAGTTGCAATGAAGACGACGACGACGACTTCGTCGTCGTTTTGGAGAAATTACCAACAAGGAGTTGAAGAAAGGTTCATGATATCCAACTCAGATAATTCCAACTTCTTCAACTCAGTTCAAGACTGCCCAATTAAAGAAGCTGCAACTTCTTCAACTCTGGTATCAAAAACAGGGGAAGCTTTGGTTATGAGTCCTCCATTGACAAACTTTACAACATCCAGCAACATGGATGTTGTTGGCCTTGAATCACAGCTCCTCCCCAGTTTCAACGGCGACAGATCGGTGACGGTAACGACGTGCTCTCTCGAGTCATTGGACTGTTTGCTTTCAGCTACAAACAGCAACACAGACACATCAGTTGAAGATGATGGATCAGTTTCAATGATGCTAACAGATTACACCAATTTATGGAACTTTGGAGGCAATGCAGCAGCATCTTCAAGAGAATCTGAAAAGAATGGTTCAAATTCTACAAAGAGAAGCCATGAACAAACTCATTCCAAAGCTGCAGATTACTCTATTTTCTCAAATAACATCATAAATCTATCTGATTCCACTTCAGACAGTGGAGGATTTAGGATCATAACAGATCAGAATCTGCCAAAACAGAAGAAACCCAGATCAGAAAAGCCACCGAGTTCATCAAACATCAATTTTCAACAATCATGTTTATCAGGATCTTCTTGTATTGATCAAGAGCCTGATCCAGAGGCCATTGCACAAATGAAAGAGATGATCTACAGAGCAGCAGCTTTCAGGCCAGTGAATTTGGGGTTAGAAATGATAGAAAAGCCTAAAAGGAAGAATGTGAGAATTTCAACAGACCCACAAACTGTAGCAGCAAGGCAAAGGAGAGAAAGAATCAGTGAGAGAATTAGGGTTTTGCAAAGGCTTGTTCCTGGTGGAAGCAAAATGGATACAGCATCAATGCTTGATGAAGCTGCAAATTATCTCAAATTCTTGAAGTCTCAGATCAAAGCTTTAGAGAATCTTGGGCAAAAGCTTGAGTCTTTGAATTGCCCTCCAACTAGCATAGCTTTCTCTTTCAACCCATCTTTTCCCATACAATCATCATCATCATCCTCCCATAATAATTTCACACTCCTAAATCCCAACCATCTTATTAACCAATATCCCCAAAACTAATCTTTCTTCCTCAAAAAAACTGTCCTCAAGATTACTCAACTTTTGATCAACTGATGTAGCTCAAATTTATTGGTTCATGTTTCAATCTTCAATGTCTCTCTCTCTCAACACAAATCAATAAATTCACATTGCACCCAA 1648 37.99 MDHLIWNGYGSRVAMKTTTTTSSSFWRNYQQGVEERFMISNSDNSNFFNSVQDCPIKEAATSSTLVSKTGEALVMSPPLTNFTTSSNMDVVGLESQLLPSFNGDRSVTVTTCSLESLDCLLSATNSNTDTSVEDDGSVSMMLTDYTNLWNFGGNAAASSRESEKNGSNSTKRSHEQTHSKAADYSIFSNNIINLSDSTSDSGGFRIITDQNLPKQKKPRSEKPPSSSNINFQQSCLSGSSCIDQEPDPEAIAQMKEMIYRAAAFRPVNLGLEMIEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLKSQIKALENLGQKLESLNCPPTSIAFSFNPSFPIQSSSSSSHNNFTLLNPNHLINQYPQN 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8382627 8384580 + XM_039043482.1 Bhi09g00406 43023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00406 393 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 284 333 IPR011598 GO:0046983
Bhi09g00406 393 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 22 388 IPR045843 GO:0003700|GO:0006355
Bhi09g00406 393 MobiDBLite consensus disorder prediction 165 179 - -
Bhi09g00406 393 MobiDBLite consensus disorder prediction 202 242 - -
Bhi09g00406 393 Pfam Helix-loop-helix DNA-binding domain 294 333 IPR011598 GO:0046983
Bhi09g00406 393 PANTHER TRANSCRIPTION FACTOR BHLH87 22 388 - -
Bhi09g00406 393 MobiDBLite consensus disorder prediction 222 241 - -
Bhi09g00406 393 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 289 349 IPR036638 GO:0046983
Bhi09g00406 393 Coils Coil 323 350 - -
Bhi09g00406 393 Gene3D - 289 352 IPR036638 GO:0046983
Bhi09g00406 393 SMART finulus 290 339 IPR011598 GO:0046983
Bhi09g00406 393 MobiDBLite consensus disorder prediction 156 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00360 Bhi-Chr4:8864528 Bhi09g00406 Bhi-Chr9:8382627 1.28E-31 dispersed
Bhi09g00406 Bhi-Chr9:8382627 Bhi09g03309 Bhi-Chr9:84666961 4.30E-31 dispersed
Bhi09g00406 Bhi-Chr9:8382627 Bhi09g00407 Bhi-Chr9:8382627 0 tandem
Bhi01g03355 Bhi-Chr1:84289060 Bhi09g00406 Bhi-Chr9:8382627 2.26E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1821 PF00010 HLH 7.20E-06 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00406 - - csv:101207907 644.039