Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00453 ATGGCTATGTCCTGCAAGGATGGTAACAAACATGGTATCGACAACGGCAAATATGTTCGGTACACACCGGAGCAGGTTGAAGCCCTTGAGCGGCTTTATCACGAATGTCCAAAACCCAGTTCCATTCGTCGTCAGCAGCTTATCAGAGAGTGTCCCATTCTCTCTAATATCGAGCCTAAGCAAATCAAAGTCTGGTTTCAGAATAGAAGATGTCGTGAAAAACAGAGGAAAGAGGCGTCGCGGCTACAAGCTGTGAACAGAAAGCTTACGGCCATGAATAAGCTTTTAATGGAGGAGAATGATAGGCTGCAGAAGCAGGTTTCGCAGCTGGTGTATGAGAATGGCTACTTCCGCCAGCATACTCAGAGTACGACGCTTGGAGCTAAAGATACAAGTTGTGAACCGGTAGTAACAAGCGGTCAACACAATTTGACGTCTCAGCATCCTCCAAGGGATGCTAGCCCTGCAGGACTTTTGTCCATTGCAGAAGAGACTTTAGCAGAGTTTCTTTCAAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGTCCTGGTGTGGCTGCACGTGCCTGCGGCCTGGTGGGTCTAGAACCTACTAGAGTTGCTGAAATCCTCAAGGATCAGCCATCATGGTTTCGCGATTGCCGAGCTGTGGATGTTCTAAACGTGCTGCCAACAGCTAATGGTGGAACCATTGAGCTGCTTTATATGCAGCTCTATGCGCCTACAACATTGGCGCCTGCACGGGACTTCTGGTTGTTGCGCTACACTTCTGTACTGGAAGATGGTAGCCTTGTGATCTGTGAGAGATCACTTAAGAACACTCAGAATGGTCCAACCATGCCTCCAGTGCAGCATTTTGTTAGAGCAGAGATGTTGCCGAGTGGATATCTGATAAGACCATGTGAAGGAGGTGGTTCTATCATTCATATCGTTGATCATATGGATCTGGAGCCATGGAGTGTTCCAGAAGTATTGCGCCCACTGTATGAGTCATCCACTGTTCTTGCTCAAAAGATGACTATGGCGGCTCTTCGCCAGTTGAGGCAGATAGCTCATGAAGTTTCACAGTCAAATGTAACAGGCTGGGGTAGACGCCCTGCAGCCTTACGTTCACTTGGTCAGAGGCTTACTCGGGGTTTTAACGAGGCACTTAATGGTTTTAACGACGAAGGGTGGTCTGTGATGGGAAATGATGGAATGGATGACGTAACTATTCTCGTAAATTCATCTCCTGACAAGCTAATGGGATTGAACATTTCATTTGCAAATGGATTTTCTGCCATCAGCAACGCAGTTTTATGTGCTAGAGCATCGATGCTGCTGCAGAATGTGCCTCCTGCAATTCTGCTGAGGTTTCTGCGGGAGCACAGGTCAGAATGGGCAGACAACAATATTGATGCTTATTCAGCTGCTGCTGTTAAGGTTGGCCCATGGAGCTTACCAGGGTCTAGAGTTGGAAGTTTTGGGAATCAAGTAATACTTCCTCTGGCTCATACCATTGAGCATGAAGAGTTTCTAGAAGTGATTAAGTTGGAAGGCATTAGCCATACTCCTGAAGATGCAATGATGCCTAGAGAAATGTTTCTACTGCAACTCTGCAGTGGAATGGATGAAAACGCTATTGGCACTTGTGCTGAACTAATCTTTGCTCCAATTGATGCCTCTTTTGCTGATGACGCACCTCTTTTACCCTCAGGGTTTCGGATCATACCACTTGATTCCGGAAAGGAAGCATCCAGCCCAAATCGTACACTTGATCTTGCTTCTGCTCTTGAAATTGGCCCTGCTGGAAATAGAGCACCAAACGACTCTGTAAATTCTGGCTGTACAAGGTCTGTAATGACGATTGCATTTGAATTTGCATTTGAGAGCCATATGCAAGAACATGTGGCATCGATGGCTCGACAATATGTACGTAGTATTATATCATCGGTTCAGAGGGTTGCATTAGCGCTCTCACCTTCTCATTTAAGTTCACATGCCGGACTGCGATCTCCACTTGGTACTCCTGAAGCACAGACACTTGCTCGTTGGATCTGCAACAGTTACAGGTGCTACTTGGGGGTGGAGCTGTTAAAATCTGGAAACGAAGGAGGGGAGCTTGTCCTGAAAACATTGTGGCATCATTCGGATGCAATCATGTGCTGCTCTCTAAAGTCTATGCAGGCACTGCCAGTGTTCACCTTTGCAAATCAGGCAGGCCTGGACATGCTCGAGACAACCTTAGTTGCACTGCAAGATATAACTTTGGAAAAGATATTTGACGACCATGGAAAGAAGACACTCTGCTCAGAATTTCCACAGATAATGCAACAGGGATTTGCTTGTCTTCAAGGAGGCATATGCCTTTCGAGCATGGGCCGACCTGTCTCGTATGAAAGAGCTGTGGCTTGGAAGGTGCTGAATGAAGAGGAAAATGCACACTGCATCTGCTTTATGTTTGTGAACTGGTCCTTTGTCTGATGCTAGGTTGCCCAAATGAAGTTGAAAACTTATTCAATGTTAGATTTCTTTATTAGTTATTTTGGTTATGTAAACTTTGGATCTCAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGACAGACAGACAATGAGTTGGGCTGCCCCTTCAGTACACTCAAATCTTTGTTCATCTGTGTA 2699 46.2 MAMSCKDGNKHGIDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLGAKDTSCEPVVTSGQHNLTSQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDQPSWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTMAALRQLRQIAHEVSQSNVTGWGRRPAALRSLGQRLTRGFNEALNGFNDEGWSVMGNDGMDDVTILVNSSPDKLMGLNISFANGFSAISNAVLCARASMLLQNVPPAILLRFLREHRSEWADNNIDAYSAAAVKVGPWSLPGSRVGSFGNQVILPLAHTIEHEEFLEVIKLEGISHTPEDAMMPREMFLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASALEIGPAGNRAPNDSVNSGCTRSVMTIAFEFAFESHMQEHVASMARQYVRSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLARWICNSYRCYLGVELLKSGNEGGELVLKTLWHHSDAIMCCSLKSMQALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGKKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFMFVNWSFV 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9698927 9704962 + XM_039042509.1 Bhi09g00453 43070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00453 840 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677
Bhi09g00453 840 MobiDBLite consensus disorder prediction 128 154 - -
Bhi09g00453 840 Gene3D - 195 379 IPR023393 -
Bhi09g00453 840 SUPERFAMILY Homeodomain-like 16 80 IPR009057 -
Bhi09g00453 840 Pfam START domain 161 369 IPR002913 GO:0008289
Bhi09g00453 840 SMART START_1 160 370 IPR002913 GO:0008289
Bhi09g00453 840 SMART HOX_1 14 80 IPR001356 GO:0003677
Bhi09g00453 840 CDD START_ArGLABRA2_like 155 371 - -
Bhi09g00453 840 MobiDBLite consensus disorder prediction 128 150 - -
Bhi09g00453 840 ProSiteProfiles START domain profile. 151 379 IPR002913 GO:0008289
Bhi09g00453 840 Gene3D - 10 83 - -
Bhi09g00453 840 Pfam Homeodomain 17 75 IPR001356 GO:0003677
Bhi09g00453 840 CDD bZIP 69 108 - -
Bhi09g00453 840 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 840 IPR044830 GO:0003700
Bhi09g00453 840 CDD homeodomain 17 77 IPR001356 GO:0003677
Bhi09g00453 840 Pfam MEKHLA domain 694 839 IPR013978 -
Bhi09g00453 840 Coils Coil 72 113 - -
Bhi09g00453 840 SUPERFAMILY Bet v1-like 160 371 - -
Bhi09g00453 840 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 840 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01419 Bhi-Chr5:50019278 Bhi09g00453 Bhi-Chr9:9698927 5.45E-16 dispersed
Bhi09g00453 Bhi-Chr9:9698927 Bhi09g02572 Bhi-Chr9:69867104 0 dispersed
Bhi09g00453 Bhi-Chr9:9698927 Bhi09g00454 Bhi-Chr9:9698927 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1824 PF01852 START 3.60E-54 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00453 K09338 - csv:101213106 1672.14