Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00516 TCCCACTCTTTATCACACACCAACCAAATTTTTGAACTCTATCACTTCTCTTCTTCTTCTTCTCCGACGACAACCGATCCATGGCCCGACCTCAACAACGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGAAGACGAGAATATGGTTGGGGACGTTCGAGACGGCGGAGGATGCAGCCCGAGCTTACGACGAGGCAGCACGGTTGATGTGCGGTCCAAATGCCCGAACCAACTTCCAATACAATCCAAACGATCAACATTCCTCATCCTCCTCTTCTAACCTTCTCTCCGCCGCGCTTATAGCCAAATTACATAAATGCCATTTAGCCTCACTCCAAATCGCCAAAAAACACATCCACAAACAGCACCCCGCCGGATTCCAGCCCCCTCCACCGAGCATTGCCGGACCCACCACCGGTCGTCGGTGGACACCCGAAGAAACGTGGGTCTACTCCGACGAAGGTCAGATGGAGATGAATGACAATAATAATAATAACAACATTCATCATCAACAATGCCTTCAACCTCTTGAAGATGATCATATTGAACAAATGATACAAGAACTGCTACACCTCGGATCATTCGAAATTATTACATAATTTTTTTTTTCTTTTTAATGTTGGGTAGCTCCAAATTTCCTCTAGATTTTAGTAATATATATATATACATATATATGATGATGATGATTAGAAATCTTATGGAAA 737 44.78 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFQYNPNDQHSSSSSSNLLSAALIAKLHKCHLASLQIAKKHIHKQHPAGFQPPPPSIAGPTTGRRWTPEETWVYSDEGQMEMNDNNNNNNIHHQQCLQPLEDDHIEQMIQELLHLGSFEIIT 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10878922 10879792 - XM_039043962.1 Bhi09g00516 43133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00516 183 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 182 - -
Bhi09g00516 183 MobiDBLite consensus disorder prediction 104 126 - -
Bhi09g00516 183 PANTHER ETHYLENE RESPONSE FACTOR 1 182 - -
Bhi09g00516 183 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Bhi09g00516 183 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Bhi09g00516 183 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Bhi09g00516 183 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Bhi09g00516 183 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Bhi09g00516 183 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Bhi09g00516 183 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Bhi09g00516 183 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00516 Bhi-Chr9:10878922 Bhi02g00994 Bhi-Chr2:22244594 1.50E-33 dispersed
Bhi04g00036 Bhi-Chr4:843250 Bhi09g00516 Bhi-Chr9:10878922 2.39E-51 wgd
Bhi09g00516 Bhi-Chr9:10878922 Bhi09g02975 Bhi-Chr9:77308288 2.64E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1827 PF00847 AP2 7.50E-12 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00516 - - cmo:103499832 279.641