Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00535 TTATCATATCGTTAAAAAAAAAAAAAAAAAAGAAAAAAAAAGCAACGGAAGGATCTAAAATTTTTTGAAGAAAAAGGGGGAAAAAAAAAAGCACACTAAAAGATAGATCTCTCTTCCTCTCTCTCCGCTGAAACTAGTGTTCGAAGCGCTTGGCGGCTTGGAAAATGGGGATATATCTCAGCTCCCCCAAAACAGAAAAGGCCTCAGATGATGGTGAGAATGAAAGACTTCGGTACGGCCTATCCTCTATGCAAGGCTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTGTCTAGATTTGGACCCTTCAACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTTCAAAGTTCTGTGCCAAGTATCTTCATCGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATTTGGGAACTTCTCTGCAGAAGGCCTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTAGGAGACAAAATGGACAAGATATCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGGGTAATGAAGCTAACAACCAAGTGGATGATTGGCCTCCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCCTGTGTTGCGATCATACGAAATAACCAACTTGTGGTGGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGTCAGGCATATAATCTATCTAAAGATCACAAGCCTGATCTTGAGGTCGAGAAGGACAGGATTCTGAAAGCAGGTGGTTTCATCCGAGTTGGTCGTGTTAATGGAAGTCTCAACTTGGCACGGGCTATAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCTGCAGAAAAGCAGATTGTAACTGCCAATCCAGATGTGACAACTGTTGAGCTTTGTGAGGATGACGAATTTCTTGTTATTGCCTGTGATGGAATCTGGGATTGCATGTCCAGCCAACAACTGGTAGACTACATTGGAGATCAACTAAAATCGGAAAGTAAACTCTCAGTTATTTGCGAGAGAGTATTTGACAGATGCTTGGCACCCACAGCTGGTGGTGAAGGATGCGACAACATGACTATGATCTTGGTTCAGTTTAAGAAATCGTTCAACAACCTGAGTGCTGCTTCTACTTCTGCTGAGGAGCTGCCTTCATCGTCCAATCAAACGTTGTCTGATCCGAATGAAGGTGCTTCTAAGACTGAATAGATTATACAATTACAATTTTAAAAATTGAAGAAGGTTACCATTCGGTTCGAGATACCAGTAAGTAAAATTTTCTCATTGATGCACTTATTTTCGATTAGTCGATTGCTTGTTGAAGAGTCAACTTGTTTTGTAAAGTAAATTTCTCTTTGTTAATGTCTTACCACTTTCGTTTCAGTACTGCAAATTTTCTTCC 1452 41.6 MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDPSTSFFGVYDGHGGKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKAFLRMDEMMRGQRGWRELAILGDKMDKISGMIEGFIWSPKGNEANNQVDDWPPEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDVTTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKSESKLSVICERVFDRCLAPTAGGEGCDNMTMILVQFKKSFNNLSAASTSAEELPSSSNQTLSDPNEGASKTE 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11200159 11205730 - XM_039044206.1 Bhi09g00535 43152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00535 364 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Bhi09g00535 364 SMART PP2C_4 13 326 IPR001932 -
Bhi09g00535 364 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Bhi09g00535 364 SMART PP2C_SIG_2 28 328 IPR001932 -
Bhi09g00535 364 MobiDBLite consensus disorder prediction 339 364 - -
Bhi09g00535 364 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Bhi09g00535 364 SUPERFAMILY PP2C-like 3 329 IPR036457 -
Bhi09g00535 364 CDD PP2Cc 23 328 IPR001932 -
Bhi09g00535 364 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Bhi09g00535 364 Gene3D - 1 329 IPR036457 -
Bhi09g00535 364 Pfam Protein phosphatase 2C 157 313 IPR001932 -
Bhi09g00535 364 Pfam Protein phosphatase 2C 23 104 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01507 Bhi-Chr1:30834957 Bhi09g00535 Bhi-Chr9:11200159 3.56E-27 dispersed
Bhi09g00535 Bhi-Chr9:11200159 Bhi09g03019 Bhi-Chr9:78209809 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00535 K17499 - csv:101214132 714.146