Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00550 TTACTCTTTCTTTTCCCCTTCCCTTTAAAATTCCCCTTTTCCATTGGATGACTCAGTCCTTTCTTCTCTCTCCTTCTGCCTCTTCTTCACGTACTTCCCTTTTCCTTCTCTGCTCGTTTTAATGGCGAAGATCTCAAATCCTTCGCACAACAATTCCATTTCCACCACTACTGATCCTCACTCTTCTTCAATCCATCACAGCCAGAGGAAGGTACTGAAGCGCACGCGTAAGTCCGCTCCTCGTGATGCTCCCGCTCAGCGTAGCTCTGTATACCGCGGAGTCACTAGGCATAGATGGACTGGACGGTATGAGGCGCATTTGTGGGATAAGAATTGCTGGAATGAAGGACAGAGTAAGAAAGGACGACAAGTGTATTTAGGAGCGTATGATGATGAAGAAGCAGCCGCTCATGCTTACGACCTTGCAGCGCTCAAGTACTGGGGAACTGAAACTGTTCTTAACTATCCACTATTAACGTACCAAGACGAGCTTAAAGAAATGGAAGGACAATCAAGAGAAGAGTATATTGGATATTTGAGAAGGAAGAGTAGCGGCTTTTCTCGTGGGGTTTCAAAGTACAGAGGTGTAGCAAGGCACCATCATAATGGAAGATGGGAAGCTCGAATCGGCAGAGTCTTTGGCAATAAATACCTTTACCTTGGAACATATGCTACCCAAGAAGAAGCTGCCACAGCTTACGACAAAGCGGCCATAGAGTACCGTGGCCTTAACGCCATTACAAATTTCGATCTCAGCCGTTACATCAAATGCCTCCGTCCTGGGGAACCGGATATCCCAAACAATAATAACTGTCCATCAAACCCTAACGCCGGCGAAACTACATCAGAATTTGACCCCAATCCCCTCATCGGAATCACCTTTCCGTCCCAATGTTCCAGCTCCGGCCAAACCGCCACTGCGCCTTTTCCGGGACCTGTCGACGGTGACTCCTCCTCCTCGTCCGCGGCGCTGGAGCTCCTACTCCATTCCTCAAAATTCAAAGATATAATAGAAAGAACAACCGTCGCCGAGGCTCCACAGACGCCGCCGGAATCTGACCGACCACGCCGCTGTATTCCCGACGACATTCAAACTTACTTCGATTGTACTCAAGATTCCGGCGACATTGCCGAAGGCGACGACGGCATTTTTGGGTACCTAAATTCGTTTTTACCTTCATCAGTTTTTCAGTGCGAACTCGATGCTTAATTAGGCACGGTAAAAAAGAGGAGGAATTCAACGTCCGACGAGATCAGTTTGAGGAAATAACTTAATTAAAAATTATAGAGAAATTAGTTTTTCATTTTTGTAAAGCCTTCTTCTTTGATTCACAAGAACAAGAGAAGGATACGTTTATTTTTTCCCCCCCGTAGAATTCATCTGCATGCAACTGTAGAAATCTTGCCTGCATTGAGAATTGGTATTGGAATTTTTAGTAGAAATAAATTGTGCATTTTTACATTACAATAAAAAGAGCTA 1480 45.27 MAKISNPSHNNSISTTTDPHSSSIHHSQRKVLKRTRKSAPRDAPAQRSSVYRGVTRHRWTGRYEAHLWDKNCWNEGQSKKGRQVYLGAYDDEEAAAHAYDLAALKYWGTETVLNYPLLTYQDELKEMEGQSREEYIGYLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDKAAIEYRGLNAITNFDLSRYIKCLRPGEPDIPNNNNCPSNPNAGETTSEFDPNPLIGITFPSQCSSSGQTATAPFPGPVDGDSSSSSAALELLLHSSKFKDIIERTTVAEAPQTPPESDRPRRCIPDDIQTYFDCTQDSGDIAEGDDGIFGYLNSFLPSSVFQCELDA 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11614910 11622195 - XM_039041327.1 Bhi09g00550 43167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00550 362 CDD AP2 151 212 IPR001471 GO:0003700|GO:0006355
Bhi09g00550 362 ProSiteProfiles AP2/ERF domain profile. 50 116 IPR001471 GO:0003700|GO:0006355
Bhi09g00550 362 MobiDBLite consensus disorder prediction 258 277 - -
Bhi09g00550 362 SUPERFAMILY DNA-binding domain 49 117 IPR016177 GO:0003677
Bhi09g00550 362 MobiDBLite consensus disorder prediction 1 51 - -
Bhi09g00550 362 SMART rav1_2 152 216 IPR001471 GO:0003700|GO:0006355
Bhi09g00550 362 SMART rav1_2 50 122 IPR001471 GO:0003700|GO:0006355
Bhi09g00550 362 Gene3D AP2/ERF domain 151 212 IPR036955 GO:0003700|GO:0006355
Bhi09g00550 362 Gene3D AP2/ERF domain 50 118 IPR036955 GO:0003700|GO:0006355
Bhi09g00550 362 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 345 - -
Bhi09g00550 362 MobiDBLite consensus disorder prediction 226 246 - -
Bhi09g00550 362 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 345 - -
Bhi09g00550 362 SUPERFAMILY DNA-binding domain 151 212 IPR016177 GO:0003677
Bhi09g00550 362 Pfam AP2 domain 49 108 IPR001471 GO:0003700|GO:0006355
Bhi09g00550 362 Pfam AP2 domain 151 202 IPR001471 GO:0003700|GO:0006355
Bhi09g00550 362 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Bhi09g00550 362 PRINTS Ethylene responsive element binding protein signature 192 212 IPR001471 GO:0003700|GO:0006355
Bhi09g00550 362 ProSiteProfiles AP2/ERF domain profile. 152 210 IPR001471 GO:0003700|GO:0006355
Bhi09g00550 362 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00844 Bhi-Chr2:17634680 Bhi09g00550 Bhi-Chr9:11614910 5.41E-135 dispersed
Bhi09g00550 Bhi-Chr9:11614910 Bhi11g03021 Bhi-Chr11:82199153 5.48E-07 dispersed
Bhi09g00550 Bhi-Chr9:11614910 Bhi03g01071 Bhi-Chr3:21679247 2.82E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1831 PF00847 AP2 2.20E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00550 K09285 - csv:101206499 620.542