Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00593 TGACTCATCGTATCAGAATTTCTACTCCTTTTTATCCGCAGTCCTCTCCACTCCGAACTCGCCGTTCACTCTATTTCCTTTTTTTCTGTCTCAGCGCCGCCGCACCGATGGAGCTTGGCCTGAGCTTGGGCGACGCCCCCAAGCCCTTCCGCTTCGTCGAGAAGCAACCGCAAGTACCGCCGCCGCAGCGAGGTCATTCCCGGCCAGATTTAGGGTTCTGTGTCGACTTATCGATTGGCCGTCCCGTCGCCGGAGAGAAAGAAGGCGACGAAGACAAACTTAATCAGAGAGAAGATGAATCCGACGGTAATGAAGATCCACCGATTCAACTCGATCTTCTCCCTCATAATCCCGTTCCTCGAAACCTTACTAACCCGTACCAAGGATTCCCATGGCCATCGTCCGAAAACGATGAAGGTGAAGACCGAACCGCATCGCCGAACAGCGCAGCGTCGTCGTTTCAGATGGAATTTGGGCTGTACGGAGGTGGAGGAAACATTTCTTGCCGGAGAGATCAAATGGAAAATGGCGTAACGAACGAAGTAGGTGAATCTGAAAGAGCGTCTTCAAGAGCTAGCGATGAAGACGAAAATGGCTGTACAAGGAAGAAACTCAGACTCTCTAAAGAACAATCCGCTTTTCTTGAAGAAAGCTTCAAAGAACACAATACCTTAAACCCTAAACAGAAGCTAGCACTGGCTAAGCAACTGAATCTTCGTCCTCGCCAAGTAGAAGTTTGGTTCCAAAACAGGAGAGCTAGGACGAAATTGAAGCAAACGGAAGTGGATTGTGAGTATTTGAAAAGATGTTGTGAGACATTAACAGAAGAGAACAGACGGCTTCAAAAAGAGCTTCAAGAATTAAGAGCTTTGAAAACAACAAACTCATTCTACATGCAATTACCAGCTACAACACTCACCATGTGTCCATCTTGTGAAAGAGTAACCTCAACTTCCGCCGCTTCCACCGCCGTCTCCGCCGTCGCCGCCGGTGGAAACAAATCGACAGAGGGAGTTACAAAACGATCCGGGTTCGCCATTGCTGGTCGACCGAGTTCTTCATCTTTCCCATTTTCTGCTAAAACGCAGTCCCACCAGTCAACAGCTTCATGATAACGAGATGGGTTTAGGCGAATCATGATGGTGGTCCCTTTTGTACATAAACCCTTTTCCTAAAAGCAAAAGAGGAGAAAAAAAAGGAAAATCAGTAGAATCCGAGAAAAAGAAGAAGAAAAGAAAAAACAGGTTATTATTATCATTATCATCATCATCATCATCACGTTTCTCTTTCTCATCTCCCTCTTCTTGGAGCAGTTTCTTCACCATTTTGGGGATTGTTTGTTCTTATGAGATTTGTTTATCTTAGATTTTTTTTTATAAAAAAAAATTAATTTTTTTCTTCATTCCCCCTGGAATTTCTTTCTGATATATTGTGAAGAAAGAAACCTAAGAAAAGAATTCTTATATACAATCATTAGTGACTTGTGTTCTTGATTTA 1497 44.09 MELGLSLGDAPKPFRFVEKQPQVPPPQRGHSRPDLGFCVDLSIGRPVAGEKEGDEDKLNQREDESDGNEDPPIQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQMEFGLYGGGGNISCRRDQMENGVTNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTSAASTAVSAVAAGGNKSTEGVTKRSGFAIAGRPSSSSFPFSAKTQSHQSTAS 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12705345 12707098 + XM_039040898.1 Bhi09g00593 43210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00593 334 CDD homeodomain 166 223 IPR001356 GO:0003677
Bhi09g00593 334 Pfam Homeobox associated leucine zipper 222 256 IPR003106 GO:0006355|GO:0043565
Bhi09g00593 334 Pfam Homeodomain 166 220 IPR001356 GO:0003677
Bhi09g00593 334 ProSitePatterns 'Homeobox' domain signature. 197 220 IPR017970 GO:0000981|GO:0006355
Bhi09g00593 334 MobiDBLite consensus disorder prediction 47 68 - -
Bhi09g00593 334 MobiDBLite consensus disorder prediction 151 167 - -
Bhi09g00593 334 Coils Coil 228 258 - -
Bhi09g00593 334 SUPERFAMILY Homeodomain-like 159 223 IPR009057 -
Bhi09g00593 334 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 1 300 - -
Bhi09g00593 334 MobiDBLite consensus disorder prediction 143 167 - -
Bhi09g00593 334 MobiDBLite consensus disorder prediction 294 334 - -
Bhi09g00593 334 PANTHER - 1 300 - -
Bhi09g00593 334 SMART HOX_1 164 226 IPR001356 GO:0003677
Bhi09g00593 334 SMART halz 222 265 IPR003106 GO:0006355|GO:0043565
Bhi09g00593 334 MobiDBLite consensus disorder prediction 1 113 - -
Bhi09g00593 334 ProSiteProfiles 'Homeobox' domain profile. 162 222 IPR001356 GO:0003677
Bhi09g00593 334 Gene3D - 170 220 - -
Bhi09g00593 334 MobiDBLite consensus disorder prediction 311 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01084 Bhi-Chr3:22004589 Bhi09g00593 Bhi-Chr9:12705345 4.80E-73 dispersed
Bhi09g00593 Bhi-Chr9:12705345 Bhi11g00845 Bhi-Chr11:24361169 1.39E-70 dispersed
Bhi12g00870 Bhi-Chr12:26344337 Bhi09g00593 Bhi-Chr9:12705345 7.92E-45 dispersed
Bhi01g00555 Bhi-Chr1:9944280 Bhi09g00593 Bhi-Chr9:12705345 3.99E-69 transposed
Bhi11g02524 Bhi-Chr11:68248543 Bhi09g00593 Bhi-Chr9:12705345 4.11E-101 transposed
Bhi11g01427 Bhi-Chr11:41371496 Bhi09g00593 Bhi-Chr9:12705345 9.75E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1832 PF00046 Homeodomain 2.30E-15 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00593 K09338 - csv:101221600 558.91