Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00937 CCATTCAACATCCAATGAAGGCCCGCCTGAATCCTGATCTGATTACTTCCGGCGAAGGTTAACGTGTAAAACCTCCACGAAAATTCTCCGCATTCAATTATTCAATTAATTTAATTTTTACGCAGAAACTGACTCGAATTCATCGATTTTGATCATTTGAACTCTCTATTCTCTAATTTTCTTGATTCTCTCTTCGGCTGTTTTTTCCCATGGCGACAAGGAATCGAACTGCACAGTTTAGAAGGCACAGGGACGCTGTGAAGAGCGTCCGTGCGCCTTTATCTTCCTCCGCAGCTGGTTCGAGCGGGCCGGTTATTGAGATGGTGAGTTCATCTCTTCTTCGTTCAAAGCGCTCTTCTTCATATGCTCCTCTTAGCACTGAAGATCCAGGTCCTTCGAGCAGTGACGCATTTATGGTGGGTCTACCTCCAGCTTGGGTGGATGATTCTGAAGAAATAACTGTTAATATACAGAAGATTCGTAGGAAGATGGCAGAGTTAGTCAAAGCTCATTCTAAAGCTTTAATGCCTTCTTTTGCTGATGGAAAAGAAGATGAGCATACAATTGAGGCACTTACGCTAGAGATTACCAATCTTTTGAAAACCTCTGAGAAGAGGTTGAAGAAAATTTCTAGTACTGGGTCCTCAGAGGATATTAACATAAGAAAAAATGTCCAGCGTTCTCTTGCTACAGAGCTTCAGAATCTTTCAATGGACCTTCGTAGAAGACAGTCAATGTATCTGAAACGTCTGCAGCAGCAAAAGGAGGGACAAGATGGAATTGATTTGGAGATAAATCTAAATGGAAACAGAACTGTCCAGGAGGATGATGGATATGATGAATTTGGAACCAATGAAAACCAAACGATGACATTAGATGGGCAGCACATTCAGGGAAGGGAGAAAGAGATTAAACAGGTTGTGAAATCGGTAAATGAGCTCGCCCAAATTATGAAGGATCTCTCAACCCTTGTTATAGACCAGGGTACCATTGTCGATAGAATTGACCACAATATTCAGAATGTTGCTGCTTCAGTTGAAGAGGGCTTTAAGCAGCTACAGAAGGCAGAGAAGAGTCAGAAGAATGGAGGAATGGTAAAATGTGCAACAGTGCTGGTTATTATGTGTTTCGTAATGCTGGTTCTGTTGATACTGAAGGAGATCATTATGTAACTAATGTTTTACCTTTTGGCTTATCGCTGCTTAACATTTTGAGAACTGTAGGCAGCCAATCAGCAGATGCCTTTCCTGTTGTGTATTATTCTCAAAGTTTTGGAATGTGGCATTGTAGAAATCATTTGCTTTGAAATATCTCATTACCTTGTTCGTTTCCACAA 1336 41.09 MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDPGPSSSDAFMVGLPPAWVDDSEEITVNIQKIRRKMAELVKAHSKALMPSFADGKEDEHTIEALTLEITNLLKTSEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKRLQQQKEGQDGIDLEINLNGNRTVQEDDGYDEFGTNENQTMTLDGQHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGFKQLQKAEKSQKNGGMVKCATVLVIMCFVMLVLLILKEIIM 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21127075 21137515 + XM_039040551.1 Bhi09g00937 43554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00937 320 CDD SNARE_syntaxin16 227 285 - -
Bhi09g00937 320 Pfam SNARE domain 260 312 IPR000727 -
Bhi09g00937 320 PANTHER SYNTAXIN 1 315 IPR045242 -
Bhi09g00937 320 PANTHER SYNTAXIN OF PLANTS PROTEIN 1 315 - -
Bhi09g00937 320 SUPERFAMILY t-snare proteins 72 279 IPR010989 GO:0016020|GO:0016192
Bhi09g00937 320 Gene3D - 73 278 - -
Bhi09g00937 320 SMART tSNARE_6 218 286 IPR000727 -
Bhi09g00937 320 MobiDBLite consensus disorder prediction 1 33 - -
Bhi09g00937 320 SMART SynN_4 67 182 IPR006011 GO:0016020
Bhi09g00937 320 ProSitePatterns Syntaxin / epimorphin family signature. 230 269 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bhi09g00937 320 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 224 286 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01461 Bhi-Chr6:44337557 Bhi09g00937 Bhi-Chr9:21127075 2.09E-139 dispersed
Bhi09g00937 Bhi-Chr9:21127075 Bhi11g00014 Bhi-Chr11:223022 4.96E-09 dispersed
Bhi09g00937 Bhi-Chr9:21127075 Bhi09g00938 Bhi-Chr9:21127075 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00937 K08489 - csv:101204192 585.489