Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00938 CCATTCAACATCCAATGAAGGCCCGCCTGAATCCTGATCTGATTACTTCCGGCGAAGGTTAACGTGTAAAACCTCCACGAAAATTCTCCGCATTCAATTATTCAATTAATTTAATTTTTACGCAGAAACTGACTCGAATTCATCGATTTTGATCATTTGAACTCTCTATTCTCTAATTTTCTTGATTCTCTCTTCGGCTGTTTTTTCCCATGGCGACAAGGAATCGAACTGCACAGTTTAGAAGGCACAGGGACGCTGTGAAGAGCGTCCGTGCGCCTTTATCTTCCTCCGCAGCTGGTTCGAGCGGGCCGGTTATTGAGATGGTGAGTTCATCTCTTCTTCGTTCAAAGCGCTCTTCTTCATATGCTCCTCTTAGCACTGAAGATCCAGGTCCTTCGAGTGACGCATTTATGGTGGGTCTACCTCCAGCTTGGGTGGATGATTCTGAAGAAATAACTGTTAATATACAGAAGATTCGTAGGAAGATGGCAGAGTTAGTCAAAGCTCATTCTAAAGCTTTAATGCCTTCTTTTGCTGATGGAAAAGAAGATGAGCATACAATTGAGGCACTTACGCTAGAGATTACCAATCTTTTGAAAACCTCTGAGAAGAGGTTGAAGAAAATTTCTAGTACTGGGTCCTCAGAGGATATTAACATAAGAAAAAATGTCCAGCGTTCTCTTGCTACAGAGCTTCAGAATCTTTCAATGGACCTTCGTAGAAGACAGTCAATGTATCTGAAACGTCTGCAGCAGCAAAAGGAGGGACAAGATGGAATTGATTTGGAGATAAATCTAAATGGAAACAGAACTGTCCAGGAGGATGATGGATATGATGAATTTGGAACCAATGAAAACCAAACGATGACATTAGATGGGCAGCACATTCAGGGAAGGGAGAAAGAGATTAAACAGGTTGTGAAATCGGTAAATGAGCTCGCCCAAATTATGAAGGATCTCTCAACCCTTGTTATAGACCAGGGTACCATTGTCGATAGAATTGACCACAATATTCAGAATGTTGCTGCTTCAGTTGAAGAGGGCTTTAAGCAGCTACAGAAGGCAGAGAAGAGTCAGAAGAATGGAGGAATGGTAAAATGTGCAACAGTGCTGGTTATTATGTGTTTCGTAATGCTGGTTCTGTTGATACTGAAGGAGATCATTATGTAACTAATGTTTTACCTTTTGGCTTATCGCTGCTTAACATTTTGAGAACTGTAGGCAGCCAATCAGCAGATGCCTTTCCTGTTGTGTATTATTCTCAAAGTTTTGGAATGTGGCATTGTAGAAATCATTTGCTTTGAAATATCTCATTACCTTGTTCGTTTCCACAA 1333 41.04 MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDPGPSSDAFMVGLPPAWVDDSEEITVNIQKIRRKMAELVKAHSKALMPSFADGKEDEHTIEALTLEITNLLKTSEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKRLQQQKEGQDGIDLEINLNGNRTVQEDDGYDEFGTNENQTMTLDGQHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGFKQLQKAEKSQKNGGMVKCATVLVIMCFVMLVLLILKEIIM 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21127075 21137515 + XM_039040552.1 Bhi09g00938 43555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00938 319 PANTHER SYNTAXIN 1 314 IPR045242 -
Bhi09g00938 319 Gene3D - 72 277 - -
Bhi09g00938 319 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 223 285 IPR000727 -
Bhi09g00938 319 SMART tSNARE_6 217 285 IPR000727 -
Bhi09g00938 319 CDD SNARE_syntaxin16 226 284 - -
Bhi09g00938 319 SUPERFAMILY t-snare proteins 71 278 IPR010989 GO:0016020|GO:0016192
Bhi09g00938 319 SMART SynN_4 66 181 IPR006011 GO:0016020
Bhi09g00938 319 MobiDBLite consensus disorder prediction 1 33 - -
Bhi09g00938 319 Pfam SNARE domain 259 311 IPR000727 -
Bhi09g00938 319 ProSitePatterns Syntaxin / epimorphin family signature. 229 268 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bhi09g00938 319 PANTHER SYNTAXIN OF PLANTS PROTEIN 1 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00938 Bhi-Chr9:21127075 Bhi11g00014 Bhi-Chr11:223022 5.87E-09 dispersed
Bhi09g00937 Bhi-Chr9:21127075 Bhi09g00938 Bhi-Chr9:21127075 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00938 K08489 - csv:101204192 579.326