Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01016 AAGCTCCAAATAAGATCTCTAGCACTTTATGTAGTTAATCCAATGCTCTCATCAATCATCATCCACATGTTTTGCTGCAGACATCAACGGAGTTCGTGAGCTAAGAAAGGAGAGCAAGACGCTCGATTGAATTGAACTCCTTTCTCAACACTCCATTACTTCCTTCATCCCCTTTTTCGTCTAATCCTTCCCATTTCTTCCAATTTTCCTCATCAGATTTCATTCACTCTACAATCCACCCGAGAATTCCCACTCCGAAGTACCCAATTGCCAATTCATCCGCACTGTCTCCCCGCTTCCCGCGAGAACAACGTTCCTTACTTTGGATGTTGCTTCATTTCTTTGATTTTTACGTATTATGAAGTGTACAGGCTTCGAAATCTGAAATTTGAATCTACTGTTGGTTGTCGAGGATGCTTCCGTGGGGAGGTCTTAGTTGCTGTTTGAGTGCAGCTGCTCTTTATCTTCTTGGAAGGAGTAGTGGCCGGGATGCGGAGTTGCTGAAATCCGTCACGCGGGTCAATCAGTTGAAGGAATTGGCTCAATTGCTTGAGGCAGAATGTGTATTACCTCTTGTCGTTGCAATTTCTGGAAGAGTGAGCTCTGATACACCAATAAATTGCGAATTTAGTGGTTTAAGGGGTGTAATTGTGGAGGAAACGGCAGAACAACACTTTCTAAAGCACAACGATGCAGGATCATGGATTCAGGATTCTGCACTGATGCTCTCCATGAGTAAAGAAGTTCCTTGGTATCTGGATGATGGGACTGGTCGTGCATTTGTGGTGGGAGCTCGAAATGCCACAAATTTTATATTACCAGTAGTGAGTGAGGTATTTGAAGAGTCTGGCAGATCCCTTATGCGTGGCACTTTAGATTATCTCCAAGGTCTTAAGATGCTTGGAGTTAAGCGAATAGAGCGCGTTCTACCTACTGGTACTTCCTTGACTGTTGTTGGCGAGGCTGCCAAAGATGACATTGGTACCATCAGAATTCAACGTCCACACAAAGGACCATTTTATGTCTCCCCAAAAACAATTGATCAACTCATAAGCAATCTTGGGAAGTGGGCCAGGTGGTACAAGTATGCTTCCGTGGGTTTGAGTATATTTGGTTTGTATCTGGTCACAAAGCATGCTATTCTTTATCTCATGGAGAGAAGGCGTCGCTGGGAATTGCAGAAAAGGGTCCTTGCTGCAGCTGCCAAGAGATCAAGCCAAGAAAATGAAGGGGAAGATGAAAAGGCCAGCAATGGAACAGATGGTACAAAGAGAGACCGGTCAATGCCAGATCTTTGTGTAATATGCCTCGAGAGAGACTACAATGCTGTTTTTGTCCCGTGCGGCCATATGTGCTGCTGTGTAGCATGTTGTTCACATTTAACAAACTGTCCCCTCTGTCGTCGGCGAATTGAGCTGGTAGTAAAGACTTTCCGCCATTAATGTTCAGCTTTGAGGACTCGTTATCATCATTAACCTTCACGAGCACTTCTATATGTCTGGAGCTGTACTAAAAAATCTGAAAAGCTATCATATCGTTTTCTTAACGAAGGCATTTGTCACATGTTGCAAGAATCTGACTAGCCAGTTACATATTGCAACCTCCCCGGATAGCAGTTGAAAGCTTCTTTCAGAAGGTAATTAAACGTAATTGCTGTGTACTAACTTCCTTTGTCTTTGAAATTGTAAATGGAACTAAACATCTCTATGTATATTATCATATTACTCTCAGATGGACCCATTAGGGGAAGAGAAAAAGGTCATTAGTCATACTTACCTATTTCATTTTGGTCCCTAAACTTCTAATTCTTCTATTTTAATTCCTTGACTTTAAAA 1835 42.45 MLPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVNQLKELAQLLEAECVLPLVVAISGRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRAFVVGARNATNFILPVVSEVFEESGRSLMRGTLDYLQGLKMLGVKRIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASVGLSIFGLYLVTKHAILYLMERRRRWELQKRVLAAAAKRSSQENEGEDEKASNGTDGTKRDRSMPDLCVICLERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTFRH 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23254282 23283434 + XM_039042546.1 Bhi09g01016 43633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01016 342 CDD RING-HC_LRSAM1 294 333 - -
Bhi09g01016 342 PANTHER - 1 309 IPR044231 GO:0004842|GO:0016567
Bhi09g01016 342 SUPERFAMILY RING/U-box 294 336 - -
Bhi09g01016 342 MobiDBLite consensus disorder prediction 268 286 - -
Bhi09g01016 342 MobiDBLite consensus disorder prediction 266 286 - -
Bhi09g01016 342 ProSiteProfiles Zinc finger RING-type profile. 295 330 IPR001841 -
Bhi09g01016 342 Pfam Zinc finger, C3HC4 type (RING finger) 293 335 - -
Bhi09g01016 342 Pfam E3 Ubiquitin ligase 86 235 IPR022170 GO:0004842|GO:0006996|GO:0016567
Bhi09g01016 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 341 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00327 Bhi-Chr9:6947709 Bhi09g01016 Bhi-Chr9:23254282 1.14E-15 dispersed
Bhi09g01016 Bhi-Chr9:23254282 Bhi01g00724 Bhi-Chr1:13450627 2.98E-06 dispersed
Bhi09g01016 Bhi-Chr9:23254282 Bhi12g01615 Bhi-Chr12:52195931 4.02E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01016 K15688 - csv:101218196 660.988