Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01062 TTAATCGATTTTGTTTTTGATTTGTTCTCTAAAATCAATCTACTTTTTTTTCTTTTTTCCCGATTCTCTCTCTGTACTCGCCAATTTTTTGCTCTATAAATTGTTGTCCACAAAACCCGCCTCTCCCTTTCGCTTTCTTCCACCAATTCAACAATACCCATTTCTCTTTGTTCTCTATTTCTTTTGTTTGGGTTGTTAATTTCATTTCCCCTTCGATTTCTGTGAAGGGGTTCTTTGCCTTCTTCATCTCTGTTGTTGTTTCTTTTCTTTTGATTGTTTTTTCTTACGATTTTTTACGATTCTGCATATGGGTTGATTTTCTATGGGCTTCTTTATCGTCCAATTTTGCAGAAATTGATCGAAGACAGTAAAATCTTCCGGTTCTTAGCCCCTAGATTTGTGTGGTGGCTGGAACAGTAATTGCTTATCAAGTTTTTAATCTTCCAGTACCAGAATATTTTATTAAACGTTTGAATTCCTTGGTTAACCTTTTTTATTTAAAAGAAACAAAAGAAGGGCTGAGAGATTATTGGTTGTATGTTTGTTTTGTTTTTGGTTTTAATTGATTTTATGGTGGTTTCGTTGAACTGGTTCTTCTTCTTGTCATCTTCACCAAGTTTTTTAAACCAATTTCTTAGTTTGGTTTTTATTGTCTTCCATGTGTTTGTAGAAATTCCCCAGTGTTTTTAAAACTCCTTTGTTTTCTTTTTTCCTCCTTACTTTCAATCTATCTATCAATAAAGCTTTATTGAAACATGGATTCAACAAATGGGGGCGAAGTCGGCAATGCTCCGGTAGCTAAGAATTATGGTAATCAAGTAGCTGATATTGTTTCTGGTAAGTCTAGCAATATCCAAGAGAAGGATTTGGGTTCAAAGTTGGGGACAGGAAGCAAAAGCAATAGGGATATGGTATTTCGTGCTGATAAGATTGATTTCAAGAGCTGGGATATTCAGCTGGAGAAGCACTTGAGCAGGGCTTGGTCAAGGGACAGGGAAGTTCCTGCTAAAAAGGAAGAATGGGAGATTGACTTGTCTAAACTTGATATCAGATATGTTAAAGCTCATGGAACTTATGGTACTATTTACAGAGGAAACTATGATGGTAATGATGTTGCAGTGAAAGTGCTTGATTGGGGTGAGGATGGTGTTGCCTCAGTTGCTGAAATTGCTGCTCTTCGAACATCTTTTCGCCAGGAAGTTGCTGTATGGCATAAGCTTGACCATCCCAATGTTGCAAAGTTTTATGGAGCATCAATGGGGACGTCCAACCTTAAAATCCCTCCAAAAAGCTCATCATTCGACAGTAACCAATCTTTTCCTTCAAGGGCTTGCTGCGTTGTTGTTGAGTATCTTCCAGGTGGAACACTAAAGAGCTTTTTAATCAAAAATAGGAAAAAGAAACTTGCGTTTAAGGTTGTGATTCAACTTGCTTTGGATCTTTCTAGAGGTTTAAGTTATCTACACTCCAAAAAGATTGTACACCGTGATATTAAAACAGAGAATGTGCTGCTAGATGATCAGAAGACTCTGAAAATTGTTGATTTCGGCGTTGCTCGAGTCGAAGCACAGAACCCAAGGGATATGACTGGAGAGACTGGCACCCTTGGTTACATGGCCCCCGAGGTCCTTGATGGTAAGCCTTATAATCGGAAATGTGATGTCTACAGTTTTGGTATATGTTTGTGGGAAACGTATTGCTGTGATATGCCTTACCCGGATCTCAGTTTTGCCGAAGTGTCATCTGCAGTTGTGCGACAGAATTTACGACCGGATATCCCTAGATGCTGCCCGAGTTCGTTTTCTAATATCATGAAAAGATGTTGGGATGCAAATCCAGAAAGGCGACCCGACATGGACGAGGTCGTAAAATTGTTGGAAGCCATTGATACAAGTAAAGGGGGGGGTATGATTAATGAAGATCAGACTAGTTGTTTCTGTTTCCGCACGCCTCGTGGTCCATAATTTCAACATCATTTGCTATGCCATTTACTTGCAGATGAAGATGGTTCAGAGAAGACATTGGTAAGCAGATGATCAATCATACAATTTATTGATTCACATAATACAATTCTCAAGTCATGGCTTTGTGGTTTCATAGTATGAACTTCTGATCCCAAATAGAATAATCATATGTCAACCATTTGTTGGTGTAATTATATTTTACTGCATGGTTTTGCATTCTTGTGAATGTTTTGTTACAAGGAACAGCTGATTGGATATATATATTTCTTTTGGTCCAAACTTTGTTA 2251 37.98 MDSTNGGEVGNAPVAKNYGNQVADIVSGKSSNIQEKDLGSKLGTGSKSNRDMVFRADKIDFKSWDIQLEKHLSRAWSRDREVPAKKEEWEIDLSKLDIRYVKAHGTYGTIYRGNYDGNDVAVKVLDWGEDGVASVAEIAALRTSFRQEVAVWHKLDHPNVAKFYGASMGTSNLKIPPKSSSFDSNQSFPSRACCVVVEYLPGGTLKSFLIKNRKKKLAFKVVIQLALDLSRGLSYLHSKKIVHRDIKTENVLLDDQKTLKIVDFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWETYCCDMPYPDLSFAEVSSAVVRQNLRPDIPRCCPSSFSNIMKRCWDANPERRPDMDEVVKLLEAIDTSKGGGMINEDQTSCFCFRTPRGP 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 24727007 24731403 + XM_039042802.1 Bhi09g01062 43679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01062 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Bhi09g01062 402 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 27 395 - -
Bhi09g01062 402 Pfam Protein tyrosine and serine/threonine kinase 104 374 IPR001245 GO:0004672|GO:0006468
Bhi09g01062 402 Gene3D Transferase(Phosphotransferase) domain 1 200 392 - -
Bhi09g01062 402 PRINTS Tyrosine kinase catalytic domain signature 197 210 IPR001245 GO:0004672|GO:0006468
Bhi09g01062 402 PRINTS Tyrosine kinase catalytic domain signature 235 253 IPR001245 GO:0004672|GO:0006468
Bhi09g01062 402 PRINTS Tyrosine kinase catalytic domain signature 301 323 IPR001245 GO:0004672|GO:0006468
Bhi09g01062 402 PRINTS Tyrosine kinase catalytic domain signature 345 367 IPR001245 GO:0004672|GO:0006468
Bhi09g01062 402 CDD STKc_MAP3K-like 103 374 - -
Bhi09g01062 402 Gene3D Phosphorylase Kinase; domain 1 84 176 - -
Bhi09g01062 402 ProSiteProfiles Protein kinase domain profile. 96 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g01062 402 SUPERFAMILY Protein kinase-like (PK-like) 78 374 IPR011009 -
Bhi09g01062 402 SMART serkin_6 96 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g01062 402 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00778 Bhi-Chr1:14693625 Bhi09g01062 Bhi-Chr9:24727007 0 dispersed
Bhi01g00779 Bhi-Chr1:14693986 Bhi09g01062 Bhi-Chr9:24727007 0 dispersed
Bhi09g01062 Bhi-Chr9:24727007 Bhi06g01180 Bhi-Chr6:33857776 8.64E-74 dispersed
Bhi02g00433 Bhi-Chr2:8068134 Bhi09g01062 Bhi-Chr9:24727007 0 transposed
Bhi11g01656 Bhi-Chr11:47495167 Bhi09g01062 Bhi-Chr9:24727007 0 transposed
Bhi01g00775 Bhi-Chr1:14692745 Bhi09g01062 Bhi-Chr9:24727007 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88110 PF07714 PK_Tyr_Ser-Thr 9.40E-58 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01062 - - csv:101207522 757.673