Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01143 CTCTGCCCTGCCATCTGCTGCTTCTCATCATTTCAATAAAATAAAATTAAAATAAAAAATTTACCCAAAACAAAAATCCCTCTCTCTCTTCTCTCTTCATTTCTCCATTGTTGAATCAATCAAATTTCTTCTACTCTTCCTCCTCCTTTCTCTGTCATTTTCTCTCTCTAAAAACCATCTTTTTCTGAAAAGGAAAACAGAAAATTTAAAGAGAAAGATGGATGGGTGGATGATGTGTGCTTTTTATTCTTTTGGGTCTCTCAAAATTCGTTTCAGTTTTTTGCTTTATTAATTCAATGGCAGAAGGAAGAATCTAGGGTTCCCATCCTCTGTTTTTTCGATCCTGATTTCCCTCCTTTTCTTCTTCTTGATCTTCTGTTTCTCTGTTGTTATGCTTAATTTCAGCTAGGTCTTTCAGATTTGGCGATTTTGCTCATTTGGGTCTTCTCTTTTTGGGAAGATAGTGATGGAAGAGGTTGAAGAAGCTAATAAGGAAGCTGTTGAGAGTTGTCATAAAGTGTTGAATCTGTTGACTGTGGCTTCCTCGTCTCAAGATCAGTTGAAGCTTAGGAGTTGTTTAATGGCGGAAACTGGAGAGGCTGTGTTTAAGTTTAGGAAAGTTTTGTGTCTTCTTGATTCTTCTGGGTTGGGTCATGCAAGGGTCAGGAAAAAGAAGGTGGTCAAGAACTTTCTGTTTAATTCCTCCTCTTCCCATTTTCCTCTTCCCCAATCTATGTTCTTAGAAACTTCTTCCCCTAATTGCAGAATGGACCTTCTCCAGGGCAGGAATTTGCAGACGGGTCCTCTTTGTTTAGGGAAGCCATCTTTGGAATTGAACCCAAATGGCAAAAGTTGTTCAATCCAACAAATACAATCTCAATCTGCTGCTCTTTATCATCATCACTTGCTTCAGAACAGGGCGTTGTTGAACAATAATCCTAATCCTAATCCTAATCCTCCACAGCCTGAAATGGTGTATCTTAGGAGCAATAGTAATGGCATTAACTTGAATTTTGATAGCTCTAGCTGCACACAACACACAATGTCATCCACTAGGTCGTTTATTTCTTCATTGAGCATTGATGGGAGTGTGGCTAACTTGGATGGGAGTGCCTTTCATTTGATCGGGGCGCCCCGGTCTTCCGATCAGAATTCGTATCATAAGAGGAAATGCAGTGGGAGAGGGGAAGATGGGAGTGTTAAATGTGGAAGCAGTGGGAAATGTCACTGCTCAAAAAAGAGGAAACATAGAGTAAAGCGATCGATTAAGGTGCCCGCGATAAGTAACAAGCTTGCAGATATCCCTCCTGATTATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCTCCTCACCCAAGAGGATACTATAAGTGCAGCAGCATGAGAGGCTGTCCAGCAAGGAAGCACGTCGAGCGGTGTCTCGAGGAACCTTCAATGCTCATTGTTACATATGAAGGTGAACACAACCATCCTAGAATACCTTCTCAACCTGCAAATACTTGAACCCCATGAAGACAACTACCCGAAGCGGATTCAAAAACCTCCGGTCAATGTAGTAAAATGGTGACAAGCCTCCCGAGTGTTGCTGTACATATGGAATACTTTTGGAGCAGCTTTGTAGCTTTTTTGAGAGGTGGGGGTGTCCTTGCAAGAGCCTCATTTAATCCATTTAGCAAGAAGTCAGAATTTAGGAAAAGCCTGGTCATGGTGAGTTAGACTGAAGAGAATTCTGTGGATTGGGATGTGAATGTAAAATCTTGAAAACTTTCATCCTTCTCTGCAATTAATGCTTCAAACAGCTTTGTTATTCTAAATGAATGGAGAAGTCCTAATTTGGAAATTCAGGGTTTTGTATTATATATATTTGTCCCTGAGTATTGATCCTTTGACTTTCAAATA 1909 40.39 MEEVEEANKEAVESCHKVLNLLTVASSSQDQLKLRSCLMAETGEAVFKFRKVLCLLDSSGLGHARVRKKKVVKNFLFNSSSSHFPLPQSMFLETSSPNCRMDLLQGRNLQTGPLCLGKPSLELNPNGKSCSIQQIQSQSAALYHHHLLQNRALLNNNPNPNPNPPQPEMVYLRSNSNGINLNFDSSSCTQHTMSSTRSFISSLSIDGSVANLDGSAFHLIGAPRSSDQNSYHKRKCSGRGEDGSVKCGSSGKCHCSKKRKHRVKRSIKVPAISNKLADIPPDYYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIPSQPANT 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 26970385 26972974 - XM_039044024.1 Bhi09g01143 43760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01143 348 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 348 - -
Bhi09g01143 348 SUPERFAMILY WRKY DNA-binding domain 278 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi09g01143 348 SMART WRKY_cls 280 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi09g01143 348 Pfam WRKY DNA -binding domain 282 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi09g01143 348 Pfam Plant zinc cluster domain 233 278 IPR018872 -
Bhi09g01143 348 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 348 IPR044810 GO:0003700
Bhi09g01143 348 ProSiteProfiles WRKY domain profile. 275 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi09g01143 348 Gene3D WRKY domain 264 342 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00277 Bhi-Chr5:5664853 Bhi09g01143 Bhi-Chr9:26970385 3.75E-128 dispersed
Bhi05g00278 Bhi-Chr5:5665256 Bhi09g01143 Bhi-Chr9:26970385 8.72E-94 dispersed
Bhi09g01143 Bhi-Chr9:26970385 Bhi09g03292 Bhi-Chr9:84072439 1.72E-57 dispersed
Bhi09g01143 Bhi-Chr9:26970385 Bhi09g01144 Bhi-Chr9:26970385 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1862 PF03106 WRKY 7.00E-26 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01143 - - csv:101216822 600.127