Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01144 GTGTTGAATCTGTTGACTGTGGCTTCCTCGTCTCAAGATCAGTTGAAGCTTAGGAGTTGTTTAATGGCGGAAACTGGAGAGGCTGTGTTTAAGTTTAGGAAAGTTTTGTGTCTTCTTGATTCTTCTGGGTTGGGTCATGCAAGGGTCAGGAAAAAGAAGAATGGACCTTCTCCAGGGCAGGAATTTGCAGACGGGTCCTCTTTGTTTAGGGAAGCCATCTTTGGAATTGAACCCAAATGGCAAAAGTTGTTCAATCCAACAAATACAATCTCAATCTGCTGCTCTTTATCATCATCACTTGCTTCAGAACAGGGCGTTGTTGAACAATAATCCTAATCCTAATCCTAATCCTCCACAGCCTGAAATGGTGTATCTTAGGAGCAATAGTAATGGCATTAACTTGAATTTTGATAGCTCTAGCTGCACACAACACACAATGTCATCCACTAGGTCGTTTATTTCTTCATTGAGCATTGATGGGAGTGTGGCTAACTTGGATGGGAGTGCCTTTCATTTGATCGGGGCGCCCCGGTCTTCCGATCAGAATTCGTATCATAAGAGGAAATGCAGTGGGAGAGGGGAAGATGGGAGTGTTAAATGTGGAAGCAGTGGGAAATGTCACTGCTCAAAAAAGAGGAAACATAGAGTAAAGCGATCGATTAAGGTGCCCGCGATAAGTAACAAGCTTGCAGATATCCCTCCTGATTATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCTCCTCACCCAAGAGGATACTATAAGTGCAGCAGCATGAGAGGCTGTCCAGCAAGGAAGCACGTCGAGCGGTGTCTCGAGGAACCTTCAATGCTCATTGTTACATATGAAGGTGAACACAACCATCCTAGAATACCTTCTCAACCTGCAAATACTTGAACCCCATGAAGACAACTACCCGAAGCGGATTCAAAAACCTCCGGTCAATGTAGTAAAATGGTGACAAGCCTCCCGAGTGTTGCTGTACATATGGAATACTTTTGGAGCAGCTTTGTAGCTTTTTTGAGAGGTGGGGGTGTCCTTGCAAGAGCCTCATTTAATCCATTTAGCAAGAAGTCAGAATTTAGGAAAAGCCTGGTCATGGTGAGTTAGACTGAAGAGAATTCTGTGGATTGGGATGTGAATGTAAAATCTTGAAAACTTTCATCCTTCTCTGCAATTAATGCTTCAAACAGCTTTGTTATTCTAAATGAATGGAGAAGTCCTAATTTGGAAATTCAGGGTTTTGTATTATATATATTTGTCCCTGAGTATTGATCCTTTGACTTTCAAATA 1303 42.36 MQGSGKRRMDLLQGRNLQTGPLCLGKPSLELNPNGKSCSIQQIQSQSAALYHHHLLQNRALLNNNPNPNPNPPQPEMVYLRSNSNGINLNFDSSSCTQHTMSSTRSFISSLSIDGSVANLDGSAFHLIGAPRSSDQNSYHKRKCSGRGEDGSVKCGSSGKCHCSKKRKHRVKRSIKVPAISNKLADIPPDYYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIPSQPANT 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 26970385 26972457 - XM_039044026.1 Bhi09g01144 43761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01144 256 Pfam WRKY DNA -binding domain 190 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi09g01144 256 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 34 256 IPR044810 GO:0003700
Bhi09g01144 256 Gene3D WRKY domain 175 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi09g01144 256 SMART WRKY_cls 188 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi09g01144 256 Pfam Plant zinc cluster domain 141 186 IPR018872 -
Bhi09g01144 256 SUPERFAMILY WRKY DNA-binding domain 186 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi09g01144 256 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 34 256 - -
Bhi09g01144 256 ProSiteProfiles WRKY domain profile. 183 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01144 Bhi-Chr9:26970385 Bhi09g03292 Bhi-Chr9:84072439 2.41E-58 dispersed
Bhi09g01143 Bhi-Chr9:26970385 Bhi09g01144 Bhi-Chr9:26970385 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1863 PF03106 WRKY 4.30E-26 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01144 - - csv:101216822 437.958