Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01160 TTGCATTTTTGTATAGTATATCCCCAAAACCCCATTTATCCCAAAAAAAAATGTCAATTGTTAGTGATTTGTTTGGTAATTACCAAGAAAGTTTCTTGTGGAACAATAATCACAATGAGAGTTTTATTTCCGGAGAAGAGAGTTCATTTGACTTCAATTACTTGAAAGAGATGTTGTTTGATGATATGTTTGTCGAGGTGGCCGAAGGAACAACGTCGTCGGATTCGAGCTCTTGTTCATCTCCGGTGGTGATGCAAGTTAAAGAGGAAATAGAGGAAGAAGGGAGTTTTAGCGACGACATCGTAGTGCAAGAAGACCAATCACATAAGGAGGAGAGGGTTTATCGAGGGGTGCGGAGGAGGCCGTGGGGGAAATATGCAGCCGAGATTAGGGATTCGACTCGACAAGGTGTGAGGGTGTGGTTGGGGACATTTGATAGTGCCGAGGCGGCTGCATTGGCGTATGACCAAGCCGCATTTTGCATGAGAGGAGGGCTAGCTACGCTTAACTTTCCGGTCGAGGTTGTTCGAGAGTCGCTCCGAGAGATGAAGTATCGATGGGAGGCCGGGTGCTCGCCGGTCTTGGCGCTTAAGCGGCGCCACTCGATACGGAGGAAGAAGATGGCTGAGGTGGAGAAGATGGAGAAGAAGATGATGAAGAAGAAGAAAACTGTAGTTGTTTTTGAGGATTTAGGTGTTGAGTACTTAGAAGAACTTTTAAGTTTGACTTCTTAATTGTGGGTCATTAGGGATGATTAATTCTTTTGCCCTCTATTCTTTCCTTCTTTTCTTCATTTTATAATAGCTAAACTAGTATCAATAATCTTCTATAGATTAAAAGTTCAAATT 848 43.04 MSIVSDLFGNYQESFLWNNNHNESFISGEESSFDFNYLKEMLFDDMFVEVAEGTTSSDSSSCSSPVVMQVKEEIEEEGSFSDDIVVQEDQSHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGCSPVLALKRRHSIRRKKMAEVEKMEKKMMKKKKTVVVFEDLGVEYLEELLSLTS 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 27316189 27317036 - XM_039043904.1 Bhi09g01160 43777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01160 227 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Bhi09g01160 227 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Bhi09g01160 227 PANTHER DNA-BINDING DOMAIN 31 225 IPR044808 GO:0003700|GO:0009873
Bhi09g01160 227 SUPERFAMILY DNA-binding domain 97 157 IPR016177 GO:0003677
Bhi09g01160 227 CDD AP2 98 156 IPR001471 GO:0003700|GO:0006355
Bhi09g01160 227 Pfam AP2 domain 97 147 IPR001471 GO:0003700|GO:0006355
Bhi09g01160 227 Coils Coil 187 207 - -
Bhi09g01160 227 Gene3D AP2/ERF domain 97 158 IPR036955 GO:0003700|GO:0006355
Bhi09g01160 227 SMART rav1_2 97 161 IPR001471 GO:0003700|GO:0006355
Bhi09g01160 227 ProSiteProfiles AP2/ERF domain profile. 97 155 IPR001471 GO:0003700|GO:0006355
Bhi09g01160 227 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 31 225 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi09g01160 Bhi12g01628 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00737 Bhi-Chr1:13801605 Bhi09g01160 Bhi-Chr9:27316189 1.44E-44 dispersed
Bhi05g00235 Bhi-Chr5:4395753 Bhi09g01160 Bhi-Chr9:27316189 2.99E-55 dispersed
Bhi09g01160 Bhi-Chr9:27316189 Bhi12g01628 Bhi-Chr12:52687729 9.32E-45 dispersed
Bhi09g01160 Bhi-Chr9:27316189 Bhi09g01161 Bhi-Chr9:27424050 1.32E-27 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1865 PF00847 AP2 4.40E-15 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01160 K14516 - csv:101205053 345.51