Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01233 ATGGCAGCCTCCTCTTCTTCTTCTTCTCCTCCATGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGCGTCAATGGCTGCATCTTTGCTCCTCATTTCCGCCACGAGCTTGGTGCCTCTCACTTCTCTGCCATCCACAAGGTTTTTGGTGCGAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCGGTCTCCCACCGTTGTGATGCGGCCGTGACGATCTCATACGAGGCTCAAGCAAGACTTCAAGATCCGATCTACGGTTGCGTATCTCATATTTTCGCTCTCCAGCAACAGGTTATGAATCTAAGAGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCTCAAATCCTTCTCAACAACTACACTACAAGAAACCCTATTGAATTACCCTACGAAAAATCTCCATTTTATTCTGACGACCCATTACTAGATCTTCAAACTTGGCTTCTGGCGGAGAGCTGCAGCGCCGCCGCACCGGAGTTTGAGCCTGCCGCGGTGCCGTACGTTGAGATGAGTGTCGTCGATTCAAATCTCGCCGGAAATTTCTGTTACTAA 552 49.09 MAASSSSSSPPCGACKFLRRKCVNGCIFAPHFRHELGASHFSAIHKVFGASNASKLLAHLPVSHRCDAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLRAQVAYLREQAAQILLNNYTTRNPIELPYEKSPFYSDDPLLDLQTWLLAESCSAAAPEFEPAAVPYVEMSVVDSNLAGNFCY 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 29497615 29498376 - XM_039040466.1 Bhi09g01233 43850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01233 183 Coils Coil 91 111 - -
Bhi09g01233 183 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Bhi09g01233 183 ProSiteProfiles LOB domain profile. 10 112 IPR004883 -
Bhi09g01233 183 PANTHER LOB DOMAIN CONTAINING PROTEIN 7 134 - -
Bhi09g01233 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 7 134 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00242 Bhi-Chr5:4598581 Bhi09g01233 Bhi-Chr9:29497615 8.44E-60 dispersed
Bhi09g01233 Bhi-Chr9:29497615 Bhi11g02885 Bhi-Chr11:77595502 1.90E-50 dispersed
Bhi09g01233 Bhi-Chr9:29497615 Bhi05g02025 Bhi-Chr5:62169715 1.78E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1873 PF03195 LOB 1.40E-34 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01233 K13945 - csv:101220863 321.627