Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01235 TTTGGGCATCTATGCCATTTCCCTGCAAAAGAGTCAGATTTTTTAAAATAAAATAAAATATTTTTTTACAGGAAAATTTGGGTCCTTTTTTGGCCAAATTTCATGCATTCGTGAGTTTGATCAATCTCTCTCCTCTCTGTCTGTTGAGAGGCTGTAGAGCAAAAATAGCCACAAGAACTCCGCCCGAAAATGGCGGAACTGGAGAATTCAAGATTACTACCGCCACAAACCATGCAAAACGAGGAACGAAGCTCAAACACAGACACAAAGAAAACCAAACTTCTGGGTTTACGCAAGAATTTTTTTCCCTCCAGCAATTCAAGCTTCTGCCGGACAAATTTTCCTAATCTTCTCATTGCTTTTGCATACACAATCAAATGGTTATGTTCGCGTAGCTGCATTTCAGAAATTCATATTGGGAGTCGGAATAATGGACAATCCTGTCAATATTGTTGTTGGTTCTCAAATATGGGTGGGAGATATAGATTCTATTTGGATTGATGGACTCGTATTGAACATCACTGGGGAAGATGCTGAGATTCAAACTAGTGATGGGAGGCAGGTGGTTGTTAAAATGTCAAATCTATATCCAAGGGATGCAGAATCTCCTACTACTGGAATTGACGATATGACTAGAATGTCATATTTGAATGAGCCTGGGTTGCTGCATAATTTGGCTATCAGATATGCAATAAATGAAATCTATACTTATACTGGAAACATTCTTATTGCCATCAACCCATTCCAAAGTATTTCAAGTCTGTATGATGCCCATGTGATGGAGCAGTACAAGGGAGCACCAATTGGGGAGCTGAAGCCTCATGTTTTTGCAATTGCTGATGTTGCATATAGGGCTATGATAAATTATGGTAAAAGCAACTCCATTCTGGTAAGTGGTGAAAGTGGGGCTGGTAAGACCGAAACCACCAAAATGCTTATGTGTTACCTTGCATTTTTGGGCGGCCATGCTGCATCTGAAGGACGGACTGTTGAACAACAAGTTTTAGAATCAAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTAAGAAACAATAATTCAAGCCGTTTTGGGAAATTTGTTGAGATCCAATTTGACAAGAAGGGACGAATATCGGGAGCTGCCATCAGAACTTATCTTCTTGAGAGATCACGGGTTTGCCAAATATCGGACCCTGAGCGCAACTACCATTGCTTTTATCTTCTCTGTGCAGCTCCACCTCAGGAGAGAGAGAGATATAAGCTGGGAAATCCAAAATCATTTCACTATCTAAACCAATCAAATTGTTATGAACTGGCTGGTGTGAATGATGCTCATGATTATCTTGCTACAAAGAGAGCCATGGATATTGTTGGAATAGGTGAACAAGAGCAGGATGCAATTTTCAGAGTTGTGGCTGCAATTCTTCACCTTGGTAATATTGACTTTGCAAAAGGAGAAGAGTCTGATTCATCATTTGTAAAAGATGAAGAATCAAAATTTCATCTTCACATGACAGCAGAGCTTCTCATGTGTGATCCCCAAGCATTAGAAGATGCTCTTTGCAAGCGCATGATGGTTACACCGGAGGAAGTCATCAAGAGAAGTCTTGATCCGCTTGGTGCAACAGTTAGCAGGGATGGATTAGCCAAGACAATATACTCCCGTTTGTTTGACTGGTTGGTAGATAAAATCAATTTTTCCATCGGACAAGATCCTTGCTCGAAATATCTGATTGGAGTACTTGATATTTATGGTTTTGAGAGCTTTCAAACAAATAGTTTTGAGCAATTCTGCATCAATTACACAAATGAAAAGCTGCAGCAACATTTCAACCAGCATGTATTCAAGATGGAGCAAGAAGAATATGTAAAAGAGGAAATTGATTGGAGCTACATAGAATTTGTTGATAATCAAGATGTCCTCGATCTCATTGAGAAGAAACCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGCATGTTTCCAAAATCAACTCATGAAACATTTTCACAAAAGCTATATCAGACCTTCAAAAATCATAAACGCTTCACCAAGCCAAAATTGGCCCGCTCAGATTTTACCATTGTTCATTATGCTGGAGATGTTCTATATCAGTCAGATCAGTTTCTAGACAAAAATAAAGATTATGTTGTCCCTGAACATCAAGACTTGTTAAGTGCTTCAAAATGTCCCTTTGTTGCTGGCCTCTTCTCTCCTCATCCTGAGGAGACGGCCAAATCATCAAAGTTTTCTTCAATTGGCTCTCGTTTTAAGGGTGTTTTGGAGGCTATTAGAATCAAATGTGCAGGATACCCTACTCATAGAACATTTCCTGAATTTTTATCTCGATTTGGAATTCTTGCACCCGAGGTATTGGAAGGGGACTATGAAGAGAAGGTAGCATGCGGAAAGATTCTAGAGAAGATGGGACATAAAGGTTATCTGATAGGGAAATCAAAAATTTTCCTTAGAGGCAACTTGATGGCCGAACTAGATGCACAAAGAACAGGGATACATAGTGCTGCTGCTATAGTTATACAGAAGCATTTCAGAGCTCGAATTGATCGTAAAAAGTACATTGCCATGCGAAGAGCTTGCATCCGTATACAATCATATTGGAGAGGTGTTCTTGCCCGCGAGTCATATGAAATTAGGAGAAGGGAAGCAGCTGCCGTCAAAATTCAAAAGAATATTCGTGCATACCTTGCCAGGAGCCGGCATGTGAAAACAAGGATCTCTACAGTTGTTCTTCAGGCTGGTATGCGTGCAATGGTTGCTCGGAGTGAACACAGACATAGGAGGCTGGTTAAGGCTGCAAAAGTTATTCAATCTTATTGGCGTCAATACAGAACCTCATCGAATTATAAGACGGGGAAAAAATCCTCAACCAGTTCACAATGCGGATCGAACTCCAAAACTTCTGGTGAAGGTCTTAAGAAGCAAAGGATGGCTAACTTGGAAGAAACAGAGGAGGATCTGGTTTTGCCTGCGTTGCTCAACAGCAGTAAAGACACCATTGATGAAACAATTGAAATGATTGCCAAGGAAAGCCGTGTTTCTCCACAAGAAATAGAAGAAGCATACTTTATTATTAAAGAACCTGGTAGTCCGGTTAAAGATGCAGATAAGATGGTCACTCTCAGAGCCGAAGTGGCTAATCTAAAGGCCATGTTGCAGGCTGAAAAGCAAAGGGCTAATGAGTGTGAAAGGAAGTATGTTGCAACACAGAGAGCAAATGAGGAAGGACGTAGAAAACTAAAAGAAACCGAAAGGAAGGTGCATCAACTTCAGGACTACATAAACAGGATGATACATTGCATGTCAAACCAAATATCGGAGATGAAAATGATCGTGGGTACTTCTAGGTTAGATGCATCTAGTTCTTTTCCGAATGAGGTTCTGACGGATGCCACATCTAGTTGCTCTGATTCATCATCAGAAGACTTCACCTTTCCTGTTCCAGGTCCATCTACGCCAACTTTCTCTTCATTCGGTACCAACACTTTTCAGCTGATTGTGCAGGATATTTCAGCTGCAGAAATTCCAGGATCTGACAATGACAGGGAAGGGGGATTCTCTGACTACTTCTAATGCGACCTCCTGTACATTTCTTCTTCCCTTCAAAATATATTAACTACTATATATTACTTCAAATATTATTAGGAAATTTGTCACAGAGTTTCTCAGTTTTCAAGGCATTTTAGCATAGCATCTACATCCAAAGGAACAAAGAATAGTAGATAAGTTAACTGCACAGAGATTCAACTACCAGAAAACCCTTCTGGCCTTTTAGTTACTTTTTTTTCCTATCTTTTATTTACACATTGAAATGCTTAGATCATTAGTCACTAATATTCTATATTGATCATCAGTTTCACTAACTTCATTCTTCATGATACTGTCAATTATTCTGACAATAGACCATTAGTTTGGAAATTGCTGTATTTTTAAGATTAGTCAAACCATTGAAAAATAATATTTGTACCACTCTACATTTTTCATTGTAGGTTACACATACACTGAATTTTGTTGTACTGAAAGTTGTTAATAGTAGTGAATACTTTTAACACCATACTTTTGTTTATGTAAA 4076 39.11 MDNPVNIVVGSQIWVGDIDSIWIDGLVLNITGEDAEIQTSDGRQVVVKMSNLYPRDAESPTTGIDDMTRMSYLNEPGLLHNLAIRYAINEIYTYTGNILIAINPFQSISSLYDAHVMEQYKGAPIGELKPHVFAIADVAYRAMINYGKSNSILVSGESGAGKTETTKMLMCYLAFLGGHAASEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQERERYKLGNPKSFHYLNQSNCYELAGVNDAHDYLATKRAMDIVGIGEQEQDAIFRVVAAILHLGNIDFAKGEESDSSFVKDEESKFHLHMTAELLMCDPQALEDALCKRMMVTPEEVIKRSLDPLGATVSRDGLAKTIYSRLFDWLVDKINFSIGQDPCSKYLIGVLDIYGFESFQTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYVKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKNHKRFTKPKLARSDFTIVHYAGDVLYQSDQFLDKNKDYVVPEHQDLLSASKCPFVAGLFSPHPEETAKSSKFSSIGSRFKGVLEAIRIKCAGYPTHRTFPEFLSRFGILAPEVLEGDYEEKVACGKILEKMGHKGYLIGKSKIFLRGNLMAELDAQRTGIHSAAAIVIQKHFRARIDRKKYIAMRRACIRIQSYWRGVLARESYEIRRREAAAVKIQKNIRAYLARSRHVKTRISTVVLQAGMRAMVARSEHRHRRLVKAAKVIQSYWRQYRTSSNYKTGKKSSTSSQCGSNSKTSGEGLKKQRMANLEETEEDLVLPALLNSSKDTIDETIEMIAKESRVSPQEIEEAYFIIKEPGSPVKDADKMVTLRAEVANLKAMLQAEKQRANECERKYVATQRANEEGRRKLKETERKVHQLQDYINRMIHCMSNQISEMKMIVGTSRLDASSSFPNEVLTDATSSCSDSSSEDFTFPVPGPSTPTFSSFGTNTFQLIVQDISAAEIPGSDNDREGGFSDYF 1048
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 29698494 29742584 - XM_039041530.1 Bhi09g01235 43852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01235 1048 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Bhi09g01235 1048 Gene3D - 741 791 - -
Bhi09g01235 1048 Gene3D - 691 740 - -
Bhi09g01235 1048 SMART MYSc_2a 56 689 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bhi09g01235 1048 Pfam IQ calmodulin-binding motif 693 711 IPR000048 GO:0005515
Bhi09g01235 1048 Pfam IQ calmodulin-binding motif 741 759 IPR000048 GO:0005515
Bhi09g01235 1048 Pfam IQ calmodulin-binding motif 715 734 IPR000048 GO:0005515
Bhi09g01235 1048 Pfam IQ calmodulin-binding motif 789 808 IPR000048 GO:0005515
Bhi09g01235 1048 Pfam Myosin head (motor domain) 65 598 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bhi09g01235 1048 Pfam Myosin head (motor domain) 608 676 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bhi09g01235 1048 PANTHER MYOSIN 6 610 - -
Bhi09g01235 1048 PANTHER MYOSIN 611 1028 - -
Bhi09g01235 1048 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 741 IPR027417 -
Bhi09g01235 1048 SMART iq_5 761 783 IPR000048 GO:0005515
Bhi09g01235 1048 SMART iq_5 738 760 IPR000048 GO:0005515
Bhi09g01235 1048 SMART iq_5 713 735 IPR000048 GO:0005515
Bhi09g01235 1048 SMART iq_5 690 712 IPR000048 GO:0005515
Bhi09g01235 1048 SMART iq_5 786 808 IPR000048 GO:0005515
Bhi09g01235 1048 Gene3D - 624 689 - -
Bhi09g01235 1048 Gene3D - 439 615 - -
Bhi09g01235 1048 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 610 - -
Bhi09g01235 1048 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 611 1028 - -
Bhi09g01235 1048 ProSiteProfiles IQ motif profile. 739 766 IPR000048 GO:0005515
Bhi09g01235 1048 CDD MYSc_Myo11 76 676 IPR036018 -
Bhi09g01235 1048 Coils Coil 896 951 - -
Bhi09g01235 1048 ProSiteProfiles IQ motif profile. 714 743 IPR000048 GO:0005515
Bhi09g01235 1048 ProSiteProfiles IQ motif profile. 691 717 IPR000048 GO:0005515
Bhi09g01235 1048 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bhi09g01235 1048 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bhi09g01235 1048 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bhi09g01235 1048 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bhi09g01235 1048 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bhi09g01235 1048 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bhi09g01235 1048 ProSiteProfiles Myosin motor domain profile. 62 615 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bhi09g01235 1048 MobiDBLite consensus disorder prediction 805 830 - -
Bhi09g01235 1048 Gene3D - 252 310 - -
Bhi09g01235 1048 MobiDBLite consensus disorder prediction 805 836 - -
Bhi09g01235 1048 Gene3D Kinesin motor domain 65 438 IPR036961 -
Bhi09g01235 1048 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 740 812 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01235 Bhi-Chr9:29698494 Bhi09g01237 Bhi-Chr9:29698494 0 dispersed
Bhi09g01235 Bhi-Chr9:29698494 Bhi09g01236 Bhi-Chr9:29698494 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01235 K10357 - csv:101220626 1937.15