Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01292 CCTATTTATCTTCTTCTCACTCTCCCAATTCATCCCCTTCTTCTTCCCCACTTTCCCCATTCTCTCTGTGTTCTTTGCTTTCTTATATAAACTTGGCTTTTTCATTCACTTTTAGCCTCCTCCAACCCCATCAATTCCCATTTCCTCAATTGGGTCAAACACAACAATTTTTCTTGTTAATGGACAACGAATTCTTCCTCAATCCTACTGGAATCTCTCAATCTCTTATGCATTTTGATTCCAATCCTTCCATGGCTACTTGGCACCACCAGTTTTCATCCGCCATGGATGTTCCACCTCAAGTTCCTGAGCTTAATCACTGTTCTTCTTCCTCTCACCAATCCCCACCGGATTGTTTTCTCAATCCCGTTCCCGATCAGAGCTTTCAATTTGATTCTGCTCTGAGTTCGATGGTTTCTTCTCCAGCGGCCTCGAATTCTAACCTAACGAATGAGAGCTTCGTGATCAGAGAATTGATCGGGAAATTAGGTGGAAATTCTGAGAGGAGGATCTTGGAATTGAATTCTTCTACTCCCGCATTGACTCCTTCTTCTTCGAGTGTGGCGGAATTTTCGTCGGATCCTGGATTTGCTGAACGAGCCGCTAGGTTTTCGTGTTTTGGAAGTAGGAGTTTCAATGGCCGTCAATTGACGAATGAATTCGGTAACTATAGATCTCGCCTCTCGATCGGTAATGAGAAATTAAGCCGAGTTTCGAGTAGTCCGTCGCTTAAAGCACTTGGATCTGAAACGAATTTGCAAGAACATAAGAAAAATTCCTCATCGCAAGAAGATGAATCGTCCCTTTCAAATCCAGACAAAACGATTTCGAATCCACGGAAGAGAAAAGCAATTACGAAACCCAAACTCAAAGAATCGGTGGTTGAAGCTACTCCCGAGAAGGGAAGTCCGAAGAAATTGAAGGCAGTGGAATCAAAGGAAAACGTGAAAACGGAAGAGGATTTGAAGAAAAGCGATGAAAATTTAGGGGAAGAGAAGCAAACTAAGGCGAATTCAAAGCCTCCTGAAGCTCCTAAAGATTACATTCATGTTAGAGCAAGAAGAGGGCAAGCTACTGATAGCCATAGTCTTGCTGAAAGAGTTAGAAGAGAAAAAATCAGTGAAAGAATGAAGCTTCTTCAAGATCTTGTACCAGGTTGCAACAAGGTTACTGGAAAAGCTTTGATGTTGGATGAGATTATCAACTATGTGCAGTCATTGCAACACCAAGTTGAGTTTCTGTCCATGAAGTTGGCTTCTGTGAATACAACCAGGGTGGATTTCAACATGGATTCTCTTATCTCAAAACAAATGTACCAATCAGGAACCAGTTTGACACATCCTCAAATTTCCCCCATAGATTCCTCAGCTTCAAGCTTTTATGGGCACCAAAATTCCTCTCTCCCAACCACCTCTCATTGCTCTGTGGACCCAATTGACTCTGTTTTATGCCAAAATCTTCCCATTCAACTCCCTCCTCTCAATTCCTTCCTTCAAAATCCCTCTCAGTATCCAAATTTTGGAGAAGATGAACTTCAAAACATTGTTCAAATGGGGTTCCTCCAAAATCAGACCCAAGAAATATCACTGCAATCCCACAACTTCAACTTAGGCTCAGATCAAATGAAAATTGAACTCTAATCTCTTCCTTCAACACCATACACAAAGGCTGCTGTTGTAAATACAAGAGATTAATTTTCAAGCATTGATTAAAGAAGAAAAAATATATCTCATTTGTCCCATTTCTTAGGTCTAATTAAGGAGAGAGAAAATCAGCCTGTATTTTATTTTTATTTTTATTTTTTTAATCTCTGTTTTATATTTAATATTGTTGTATTTTTTTTCCTAATTTTGTGGGATGAGAGAGGAAAGTTTCTACTTTTCTTACAACTTTCCCCTGTAAAATCTCTAGAAGCAAGTCTGTCCCTTTTGGTGCAAAGTTGTACAGCACCACATTGTATGATAAAAGAAAAAAAAAGAGGCTAATTTGAGGGATTATTTTTTATAA 2007 39.51 MDNEFFLNPTGISQSLMHFDSNPSMATWHHQFSSAMDVPPQVPELNHCSSSSHQSPPDCFLNPVPDQSFQFDSALSSMVSSPAASNSNLTNESFVIRELIGKLGGNSERRILELNSSTPALTPSSSSVAEFSSDPGFAERAARFSCFGSRSFNGRQLTNEFGNYRSRLSIGNEKLSRVSSSPSLKALGSETNLQEHKKNSSSQEDESSLSNPDKTISNPRKRKAITKPKLKESVVEATPEKGSPKKLKAVESKENVKTEEDLKKSDENLGEEKQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNMDSLISKQMYQSGTSLTHPQISPIDSSASSFYGHQNSSLPTTSHCSVDPIDSVLCQNLPIQLPPLNSFLQNPSQYPNFGEDELQNIVQMGFLQNQTQEISLQSHNFNLGSDQMKIEL 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 31785094 31788317 - XM_039044337.1 Bhi09g01292 43909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01292 486 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 297 347 IPR011598 GO:0046983
Bhi09g01292 486 Pfam Helix-loop-helix DNA-binding domain 301 348 IPR011598 GO:0046983
Bhi09g01292 486 Gene3D - 294 366 IPR036638 GO:0046983
Bhi09g01292 486 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 106 IPR024097 GO:0006355
Bhi09g01292 486 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 121 479 IPR024097 GO:0006355
Bhi09g01292 486 SMART finulus 303 353 IPR011598 GO:0046983
Bhi09g01292 486 PANTHER BHLH TRANSCRIPTION FACTOR 121 479 - -
Bhi09g01292 486 PANTHER BHLH TRANSCRIPTION FACTOR 2 106 - -
Bhi09g01292 486 MobiDBLite consensus disorder prediction 173 196 - -
Bhi09g01292 486 CDD bHLH_AtBPE_like 287 373 - -
Bhi09g01292 486 MobiDBLite consensus disorder prediction 173 286 - -
Bhi09g01292 486 MobiDBLite consensus disorder prediction 228 286 - -
Bhi09g01292 486 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 295 362 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01175 Bhi-Chr1:23058893 Bhi09g01292 Bhi-Chr9:31785094 1.74E-86 dispersed
Bhi05g01240 Bhi-Chr5:44812916 Bhi09g01292 Bhi-Chr9:31785094 1.83E-52 dispersed
Bhi08g01233 Bhi-Chr8:38241415 Bhi09g01292 Bhi-Chr9:31785094 4.04E-40 dispersed
Bhi08g01535 Bhi-Chr8:44068362 Bhi09g01292 Bhi-Chr9:31785094 1.79E-45 dispersed
Bhi09g01292 Bhi-Chr9:31785094 Bhi09g03191 Bhi-Chr9:81814217 2.87E-50 dispersed
Bhi10g02008 Bhi-Chr10:50176855 Bhi09g01292 Bhi-Chr9:31785094 7.31E-44 dispersed
Bhi10g02009 Bhi-Chr10:50176855 Bhi09g01292 Bhi-Chr9:31785094 6.72E-44 dispersed
Bhi09g01292 Bhi-Chr9:31785094 Bhi09g01293 Bhi-Chr9:31785094 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1879 PF00010 HLH 3.70E-06 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01292 - - csv:101204984 868.996