Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01446 TAAGCTTTATGGGACTGAAGAAGAACAGAGGACAGTAGGGGAAAACAGAGAGAGAGAGAGAGAGAGAGAGGCCTCCATTATATTATATTAGTATAGCTCTCTCACCCAATTCCAATTCCCACAACTGTGCAAAATTCAAAACCTCTCCATTACAGAGAGAAAATTTATAGACGGCGACAGCTCTTGCAGCTGCAGGCAGAGATGGATAGGCCTATGAGAAAGCCATTTTTTGGGGATTTGTTAACGTTAAGTCAGTTCCTTTAGAGAGAGAGAGATAAAGAAGCAGAGAAATTAAAGACGACCCAACATAATTTTTTCCTCTCAGAAGCGTTTTTCTCTGCAGCACTTCAAAAAGAAGAAGCTGATTTGTAACAGATGCCGATGAGGGAGAGAAAGAAATAGAGCAGATAATAATCACAGACACAGTCTGTTACACAAAGCAGAAAAAAGAAAACAGGGGAAAAATAAAACTTGTACGGTTAATTATGATTGCTTGCTTAACCGTCCTGTTTTGTTAGCTTTTTTTTTCCCTCTCTCTCTCTTCCTTCTGTGCCTTGTCCTTTGATTGATCGGTAGATGGGGTAGCACCACAGTTTGCCATTCTTTCAGACTGTGAAAAACAGAGAGAGAGAGAGAGAGAGAGAGAGACTCTTTTCCTCGTTTCTCTTCTTCTTCGTTGGTTTTTCTTGTTGTTCTTCAATCTTTGGCGTTTGAGATTGAGACCCATTTTTTTTAATTTGAATGACGCTTTACGAACAGAATCTGGGGGAGTCTCGCAAAGGTTTGGAAGGTGAGGATCTGTATGAAGAACTGTGGAAGGCATGTGCAGGGCCTCTTGTTGAAGTTCCTGTCGATGGAGAAAGGGTTTTTTACTTCCCTCAGGGTCATATGGAACAATTGGAAGAGTCCACAAATCAGGAGCTTAATCACCAAATCCCTCATTTTGATCTTCCTCCCAAGATCCTATGTCGTGTTGTTAACATTCGTTTGCTGGCTGAAAAGGAAACAGATGAGGTCTATGCTCAAATCACTTTATACCCAGAAGCTGATCAAAGTGAGCCCCAAAGCCCTGATCCAGAGCCACCTGAGCGTACAAGGCAAACTGTTCATTCTTTTTGTAAGATTTTGACTGCGTCTGATACTAGCACTCATGGAGGTTTCTCAGTTCTTAGAAAGCATGCCACTGAATGCCTTCCTCCCCTTGATATGAGTCAATCCACCCCAACTCAAGAATTAACTGCCAAGGATCTTCATGGGTATGAGTGGAAATTTAAGCATATTTTCAGAGGTCAACCACGGAGGCATTTGCTAACTACCGGGTGGAGTACGTTTGTTACATCGAAACGGCTGGTTGCTGGTGATGCCTTTGTTTTCTTAAGGGGAGACAATGGGGAATTGAGGGTTGGTGTTCGACGGCAGGCTCGCCAGCAGAGTTTGATGCCTTCCTCCGTGATATCTAGCCATAGTATGCATCTTGGAGTTCTTGCCACCGCTTCTCATGCTGTTCGTACGCAGACCTATTTTGTTGTGTATTACAAGCCAAGAACTAGCCAATTCATCATCAGCTTAAACAAGTACTTGGAGACAGTTAAAAATGGATATGAAGTGGGGATGCGCTTCAAGATGAGATTTGAAGGAGAGGAATCACCAGAGAGAAGATTCACTGGAACCATTGTTGGTATTGGTGATATGTCTTCGCAATGGTTGGATTCGAAATGGCGATCGCTAAAGATTCAATGGGACGAACCTGCTACGATTCAGAGGCCCGAACGAGTTTCTCCATGGGAGATTGAACCCTTTGTACCTTCTGCCTCCTTAAACTTCACTCATCCTGCCATAAAGAGTAAAAGGGCCCGTCCTGTCGAGATTCCTCCTCCTGAAATTACTTCCAGTTCAGCTCCTTCGGGCTTTTGGCTTCAAGGATCAACGATTCCTCACGAAATACCCCAACTAAGTGGTACGAATGAAGTCCAAAGCAGTAATAACCGAGTTGTCCGGGCTCTCGGACAGCAAAAACTTGATAGCGATAGCAGCCACTGTAATCCAGTAGCAAATGTGGAAGGCATTTGGCCTTGTCCTCCACTCAATATTTCCCTGAAGCTTTACCCAGATTCAACATTTGAAAGAGAACTTGTTCAGAAACAGCCACTACCCTCTCCTTATTCTTCATCTGTCACTTCGAAGCCTAGTAGTGAGCTCATACAGCATGATCAATTGGAGAAAGGGAATAAACCCGACATGTCTCTCGGTTGCCGAATATTTGGAATCGATTTGAAAAATAACTCAAGCATTATCTCTTCCTTGGAAAGATCAAAACCACGTTGCCCAATGATGGTGGCCGATGATGCCAAAGATCCAGTAGCTGCAGCTGCTGTGATGCCTCAAGTCGACGCTGGAAACCTCTCACAGCCTTCAAAGGAGCAGCTGCAAGCGTCATCAGAGCTGTTGACGAAGGGAATACAGACAAAACACGTTCCCAATCTCTCATCGAGAACACGTACAAAGGTACAAATGCAAGGAGTTGCTGTAGGTCGAGCGGTCAACTTGACTACACTTGAAGGTTACGAAGGTTTGATAGACGAGCTGGAGAATGTGTTTGAAATAAAAGGAGAACTTCGTGAAATAAACAAATGGTCTGTCGTTTTCACAGATGACGAAAACGACATGATGCTCGTGGGGGATGATCCATGGCCAGAGTTCTGTAAGATGGTGAAGAGGATCTTTATATATTCAAGTGAAGAAGTGAAGAAGATGAGTAGGGAAAGCAAGATTGTTTCCCCATCATCCTTTGATAGCTTGGATTCAGAGCGCAAGACTGAATCCTAATATTGTTTTGCGGGAGTTTTCTCTTGTTAATTTTGGGTAGTTTAGCAGTAATAGTAATCAGCAATAGTGTGAAGCTGGCAAGTGGTTTTGCTTGGTGCTTTTTTCTTCTTTTTAATAGTTTATAGAATATGCTTTATGTAAGCCAAGCAGAAGTGCTTCTTTTGTAGGGGAGAGGCCTTAAAAGTGCTTCTTACTGCAGTTTCTAACAATCACTCATCTTAATTAGTAAGTTCA 3060 43.01 MTLYEQNLGESRKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDLPPKILCRVVNIRLLAEKETDEVYAQITLYPEADQSEPQSPDPEPPERTRQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQELTAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSMHLGVLATASHAVRTQTYFVVYYKPRTSQFIISLNKYLETVKNGYEVGMRFKMRFEGEESPERRFTGTIVGIGDMSSQWLDSKWRSLKIQWDEPATIQRPERVSPWEIEPFVPSASLNFTHPAIKSKRARPVEIPPPEITSSSAPSGFWLQGSTIPHEIPQLSGTNEVQSSNNRVVRALGQQKLDSDSSHCNPVANVEGIWPCPPLNISLKLYPDSTFERELVQKQPLPSPYSSSVTSKPSSELIQHDQLEKGNKPDMSLGCRIFGIDLKNNSSIISSLERSKPRCPMMVADDAKDPVAAAAVMPQVDAGNLSQPSKEQLQASSELLTKGIQTKHVPNLSSRTRTKVQMQGVAVGRAVNLTTLEGYEGLIDELENVFEIKGELREINKWSVVFTDDENDMMLVGDDPWPEFCKMVKRIFIYSSEEVKKMSRESKIVSPSSFDSLDSERKTES 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36642402 36646817 + XM_039042530.1 Bhi09g01446 44063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01446 694 MobiDBLite consensus disorder prediction 467 486 - -
Bhi09g01446 694 SUPERFAMILY CAD & PB1 domains 580 660 - -
Bhi09g01446 694 ProSiteProfiles PB1 domain profile. 584 676 IPR000270 GO:0005515
Bhi09g01446 694 CDD B3_DNA 123 225 IPR003340 GO:0003677
Bhi09g01446 694 Pfam Auxin response factor 251 330 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi09g01446 694 Pfam AUX/IAA family 630 668 IPR033389 -
Bhi09g01446 694 SUPERFAMILY DNA-binding pseudobarrel domain 116 254 IPR015300 -
Bhi09g01446 694 Gene3D - 287 358 - -
Bhi09g01446 694 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 10 682 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi09g01446 694 ProSiteProfiles B3 DNA-binding domain profile. 125 227 IPR003340 GO:0003677
Bhi09g01446 694 PANTHER AUXIN RESPONSE FACTOR 11 10 682 - -
Bhi09g01446 694 MobiDBLite consensus disorder prediction 672 694 - -
Bhi09g01446 694 MobiDBLite consensus disorder prediction 99 121 - -
Bhi09g01446 694 MobiDBLite consensus disorder prediction 469 486 - -
Bhi09g01446 694 SMART B3_2 125 227 IPR003340 GO:0003677
Bhi09g01446 694 Gene3D - 580 672 - -
Bhi09g01446 694 Gene3D - 122 227 IPR015300 -
Bhi09g01446 694 Pfam B3 DNA binding domain 125 226 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00618 Bhi-Chr2:12034365 Bhi09g01446 Bhi-Chr9:36642402 6.08E-28 dispersed
Bhi09g01446 Bhi-Chr9:36642402 Bhi12g00123 Bhi-Chr12:3921637 0 dispersed
Bhi09g01446 Bhi-Chr9:36642402 Bhi03g00112 Bhi-Chr3:2995513 2.17E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1892 PF02309 AUX_IAA 4.60E-09 CL0072 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01446 K14486 - csv:101205805 1256.89