Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01511 TTTGTTGACTAATTTCATCATATAGTTCAAAAATGCTACTGTAGAATTGGATAATTTCATCACTTCATTTATTCATCTCACACTTTTCAATGCTTCTTTCTCACTCTCATCATCATTATCATTTCCATCTTAAGACCCGCATGCATATAGTGCTGCAGCTACTCACCTCACCCACTTCGGCTTTAAGTCTCCCAAATGAACATCTTGTGACTGAAAATCTCCCTTTTTCTTTAAAGTGTGCAGAGATTCACGTGCCCATTGAACAGAATTTGGTTTTTTCCGGATTATAATATAAATTCCTTTCTGGGTTCATCGATCTTTTTTTAAAATCTCTTAAATGAGAAGGGTTTGTTGAGTTTTGCCCTTTGGGGGAAGCTTTTTGGTGGTTTTTCTGAGATGGGTCGGTGGGGTTTTAGTGGGGTTTTGTTTGTGTTTGGTTTTCTCTGGTTATTGAGCGGCGGTGGCGGCGGAGGCAGCAGCGGAGTTGAGGGTTTTCCGAGTGAAGATCTGGTGCTGCGGCTGCCAGGTCAGCCGCTGGTTAAGTTCAAACAGTATGCTGGATATGTTGATGTGGATGTGAAAAATGGGAGGAGTTTGTTCTACTATTTCGTTGAAGCAGAGGAGCAGCCAGAGAAGAAACCTCTCACTCTATGGCTCAATGGAGGTCCTGGTTGTTCCTCTGTTGGTGGAGGTGCTTTTACAGAGTTGGGTCCTTTTTATCCCAGTGGGGATGGAAGAGGCCTCAGGAAGAATCCCATGTCTTGGAATAAAGCTTCAAATCTTCTCTTTGTTGAATCTCCTGCTGGAGTAGGATGGTCATACTCAAACACAAGTTCAGATTATAACTGTGGGGATGCCTCAACTGCCAGGGATATGCATATGTTTATGATGAATTGGTATGAGAAGTTTCCATCATTTAAAACCAGCGCGTTGTATCTTACAGGCGAAAGTTATGCAGGGCATTACATACCACAGTTGGCTATTGCTCTGTTGGATCACAATGCAAAGTTCAGTGGTTTCAAGTTCAACATCAAAGGAGTTGCTATCGGGAACCCTCTATTGAAACTCGATAGAGATGTTCCAGCAACATATGAGTATTTTTGGTCGCATGGAATGATTTCAGATGAAATTGGCATGACCATCATGAGTGAATGTGATTTCGAGGATTATACTTTCACAAGTCCTCATAATGAGTCACATTCATGCAATGAAGCCATATCCATGGCAAACCACGTTGTTGGAAATTACATAAATAATTATGATGTCATCCTTGACGTGTGCTATCCATCTATAGTGGAGCAAGAGCTACGGTTGAGGAAAATGGCTTCAAAGATAAGTTTGGGGGTTGATGTGTGCATGACCATGGAAAGAAAATTCTACTTCAACCTTCCAGAGGTTCAGAAAGCCCTTCATGCTAACCGAACTAAATTACCTTACCATTGGTCGATGTGCAGTCCTGTTATAAATTACAGCGACACCGATGGTAACATCAACATACTTCCATTGCTTAAAAGGATAATTGAAAATCGAATCCCGGTTTGGGTTTTCAGTGGGGATCAAGATTCTGTCGTACCCTTGATGGGATCTCGAACGCTCATCCGTGAACTCGCTCATGATCTGAAGTTCAAGATTACAGTCCCATATGGGACATGGTTCCACAAAGGCCAGGTTGGAGGTTGGGCAATTGAGTACGGAAATTTGTTGACCTTTGCGACAGTAAGGGGTGCTGCTCATATGGTACCTTATGCGCAGCCATCAAGAGCATTGCATCTGTTTAGTTCGTTTGTTCACGGCTGGCGACTGCCTAATTCAACTCGCCCTTCAATTGAAGATTAGATAAGTTTTCTACACAGATCACTCTTACTTCATATGCATTCTGGAAAATGGAAAATAAGAAAATAAGTAACATTCAATCCCCAAGTCTGGGGAAATTTACAATATTGAATTATCTGGTATACCAGCATGAGTTCATTGAAAGTTTGGGTTTGAATTAGAATTAAGAAGAAATTGATTCTCTGGATTTCTCCAGTTCTATACACCATTGTAAGCTACGGTTAGCGCCAGAACATGGTTAGACAATTAAAGCTTTAGTTGTCTTTCATATGTATGGAAAGTCTTCAAAATTAGCCTAAATTGTATAAGCCACACTGGTTGTTGTTAC 2161 41.14 MGRWGFSGVLFVFGFLWLLSGGGGGGSSGVEGFPSEDLVLRLPGQPLVKFKQYAGYVDVDVKNGRSLFYYFVEAEEQPEKKPLTLWLNGGPGCSSVGGGAFTELGPFYPSGDGRGLRKNPMSWNKASNLLFVESPAGVGWSYSNTSSDYNCGDASTARDMHMFMMNWYEKFPSFKTSALYLTGESYAGHYIPQLAIALLDHNAKFSGFKFNIKGVAIGNPLLKLDRDVPATYEYFWSHGMISDEIGMTIMSECDFEDYTFTSPHNESHSCNEAISMANHVVGNYINNYDVILDVCYPSIVEQELRLRKMASKISLGVDVCMTMERKFYFNLPEVQKALHANRTKLPYHWSMCSPVINYSDTDGNINILPLLKRIIENRIPVWVFSGDQDSVVPLMGSRTLIRELAHDLKFKITVPYGTWFHKGQVGGWAIEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVHGWRLPNSTRPSIED 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39992258 39995840 + XM_039040958.1 Bhi09g01511 44128

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01511 479 PANTHER CARBOXYPEPTIDASE 16 473 - -
Bhi09g01511 479 SUPERFAMILY alpha/beta-Hydrolases 36 469 IPR029058 -
Bhi09g01511 479 Gene3D - 367 466 - -
Bhi09g01511 479 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Bhi09g01511 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 473 IPR001563 GO:0004185|GO:0006508
Bhi09g01511 479 Pfam Serine carboxypeptidase 44 466 IPR001563 GO:0004185|GO:0006508
Bhi09g01511 479 Gene3D - 320 356 - -
Bhi09g01511 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Bhi09g01511 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Bhi09g01511 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Bhi09g01511 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Bhi09g01511 479 Gene3D alpha/beta hydrolase 34 296 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01511 K16297 SCPL-II; serine carboxypeptidase-like clade II [EC:3.4.16.-] - csv:101210351 879.782
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi04g01820 Bhi09g01511 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01820 Bhi-Chr4:44689859 Bhi09g01511 Bhi-Chr9:39992258 0 dispersed
Bhi09g01511 Bhi-Chr9:39992258 Bhi01g03748 Bhi-Chr1:96310032 4.41E-133 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1215 . . . . . . . . Cmo04g02540 Cmo15g00631 . Cma09g01090 . . Sed11g1328 Cpe06g00890 . Bhi04g01820 Tan11g1189 Cmetu01g2322 . Hepe02g2767 . Lcy10g1313 Cla08g00662 Cam08g1093 Cec08g0678 Cco08g0787 Clacu08g0798 . Cre08g0601 . Cone7ag1433 . Cone20ag0399 . . . Cme03g00398 . Blo18g00222 . . . . Bma01g00874 . . . Cmo09g01099 . . Car04g02338 Car09g00988 Cpe01g02099 . Bhi09g01511 . . . . Mch11g1423 . Cla09g00918 Cam09g0970 Cec09g0975 Cco09g0981 . . Cre09g0939 Lsi08g00522 . Chy03g00587 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002124 1 2 1 1 1 2 3 2 2 2 2 2 1 2 3 3 2 3 2 2 2 2 2 2 2 2 3 7 2 2 65