Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01524 TTTTCCTCTTCCTCTCCATATACTCTCTCTTTCTTTCTCTTTCCTTTCATTTTCATCAATCAAATTAATTAACCATTCATATTTTGTTCCTTCCCCCTCTTCCATTTTCTTTCTAGATTTTGAGAGTGTTTGTGTTTTCTACTTCAATTAATCCACTGAACAAGAAAAAAAAGGTGTAGTTTAGTTTGTTCCCTAAAAATGCCTTCCTTTGTTGGTGGAACTCAAACTCTAACTCATCAACCTAAAGATTCATCCTCTCTTGACCTCCCTTCTTTGGTCTCTTCTTCTTCTCTTCCTCTTACTCTCAAGTTTGTAGACGTGAGTTATCGAGTAAAGATGACGGATAAGAATAGTGGAAATGCCATCGGACGAATTTTCGGTTGTGGCTCGTCCGATGGGGCGCCACCGCCCGTTCAAGAGCGGAGTATTCTACAAGGGGTTACTGGCATGGTGTCTCCAGGAGAGATTCTAGCCATTCTTGGTCCGTCAGGAAGTGGCAAGTCAACTCTTCTCAATGCACTTGCAGGAAGATTGCAGGGTAATGGTCTGGCTGGATCAGTACTGGCCAACGGTCGAAAGTTGACTAAATCCATACTCCGACGGACTGGGTTTGTGACACAGGACGACGTCCTCTACCCGCACTTAACCGTCCGAGAGACACTCATATTCTGCTCTCTTCTCCGACTGCCTCTAACCCTTTCAAAGCAAGAAAAAATCGCGGTCGCCGAGTCGGTGATCGCCGAGCTCGGGCTAACGAAATGCCAAGACACGATCATCGGTAACGCCTTCATTCGTGGCGTCTCTGGCGGAGAACGAAAAAGGGTCAGCATAGCACATGAGATGCTCATAAACCCAAGCCTACTAATCTTGGATGAGCCGACGTCGGGGCTCGACTCGACCGCGGCGCATCGGCTCGTGACGACCATGGCTGCCCTGGCTCACAAGGGCAAGACCATAGTCACTTCAATTCACCAACCTTCGAGTCGGGTGTACCAAACCTTTGACTCGGTGTTGCTGTTGTCGGAAGGAAGATGTTTGTATTATGGGAAAGGAAGTGAAGCAATGAGCTACTTTGAGTCTATTGGTTTCACACCGTCTTTTCCTATGAATCCCGCTGATTTTCTCCTCGATCTCGCCAATGGTGTTTACCAAATTGACAATACAAGTGAAATGGAGAAACCCAACATGAAGCAAACCCTAATTACTTCTTACAACACTCTTTTGGCTCCAAGAGTAAAGGCAGCTTGCATGGAAACATCAATGTTGCTCGAAACAATGACACGTGAAAGGAAATCGTCAACCAATACTTGCAAAGCTAGTGTTGTGTCGTGGTGCAACCAATTGAGTATCTTGCTCCAGAGAAATCTCAAAGAACGAAAACACGAAACCTTCAATGCTCTAAGAGTGTTCCAAGTTATCACCGCAGCGATGCTCGCTGGATTGATGTGGTGGCACTCAGATTTTCGAGATATTCAAGATCGCCTTGGCCTTCTCTTCTTCATTTCCATTTTTTGGGGCGTTTTCCCTTCGTTTAACGCAGTCTTTGCATTCCCCCAAGAGCGAGCAATCTTCCTTAAGGAACGAGCTTCTGGTATGTATACGCTATCGTCTTATTTCATGGCTCGAGTCATCGGAGACCTTCCCATGGAGCTCATCCTTCCAACAATCTTCCTCACGGTGGCATATTGGATGGCTGAGCTAAAACCGGAGCTTAGTGCCTTTCTCTTGACATTGTTGGTCCTTCTTGGCTACGTGCTTGTATCGCAAGGTCTCGGCCTCGCTTTAGGCGCAATGATCATGGACGCAAAACAAGCTTCCACCATAGTAACTGTGACAATGTTGGCATTTGTCTTAACGGGAGGATTTTACGTACACAAAGTACCAACCTGCATGGCTTGGATCAAATACATCTCAACCACATATTACAGTTATAGGCTCTTCATCAACGTGCAATACGGCACCGGAGACAAGATATGGTCGTTGCTCGGTTGCTCACGACACGGAACCGACAAAGCAAGCTGCAAATTTGTGGAAGAAGATGTGGCAGGGCAGATAAGCCCTGCATTGAGCATTGGAGCTTTGTTATTTATGTTTGTGGGTTATAGGTTATTGGCATATTTGGCTTTGAGACGCATCAAATAGAAGAAAACAAAAGCCCTAAAAGAAGGAGAAAATGCAGAAGGAAAAGCTTGCATTGCATGCATGTTTGACAAAGTTTGGGAGGATTTTCCACTAACCATTTGGTTCTCCAAACCACACTAATGATGATTTGGGTAAATGTAAATAGCCAAGATGAAGTTTATGAATGTTTTTTCTTTTAAATGTTACTAGCAATATATGCAATATGAGAATCCCAACTCTCTCTTTTGGTACATCTATCAATAGAATGAATAAATGATTTCTTTCCTA 2409 44.46 MPSFVGGTQTLTHQPKDSSSLDLPSLVSSSSLPLTLKFVDVSYRVKMTDKNSGNAIGRIFGCGSSDGAPPPVQERSILQGVTGMVSPGEILAILGPSGSGKSTLLNALAGRLQGNGLAGSVLANGRKLTKSILRRTGFVTQDDVLYPHLTVRETLIFCSLLRLPLTLSKQEKIAVAESVIAELGLTKCQDTIIGNAFIRGVSGGERKRVSIAHEMLINPSLLILDEPTSGLDSTAAHRLVTTMAALAHKGKTIVTSIHQPSSRVYQTFDSVLLLSEGRCLYYGKGSEAMSYFESIGFTPSFPMNPADFLLDLANGVYQIDNTSEMEKPNMKQTLITSYNTLLAPRVKAACMETSMLLETMTRERKSSTNTCKASVVSWCNQLSILLQRNLKERKHETFNALRVFQVITAAMLAGLMWWHSDFRDIQDRLGLLFFISIFWGVFPSFNAVFAFPQERAIFLKERASGMYTLSSYFMARVIGDLPMELILPTIFLTVAYWMAELKPELSAFLLTLLVLLGYVLVSQGLGLALGAMIMDAKQASTIVTVTMLAFVLTGGFYVHKVPTCMAWIKYISTTYYSYRLFINVQYGTGDKIWSLLGCSRHGTDKASCKFVEEDVAGQISPALSIGALLFMFVGYRLLAYLALRRIK 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40484192 40492598 + XM_039043090.1 Bhi09g01524 44141

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01524 647 MobiDBLite consensus disorder prediction 1 24 - -
Bhi09g01524 647 SMART AAA_5 87 278 IPR003593 -
Bhi09g01524 647 Gene3D - 71 295 IPR027417 -
Bhi09g01524 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 645 - -
Bhi09g01524 647 Pfam ABC-2 type transporter 381 586 IPR013525 GO:0016020|GO:0140359
Bhi09g01524 647 Pfam ABC transporter 78 229 IPR003439 GO:0005524
Bhi09g01524 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 296 IPR027417 -
Bhi09g01524 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 301 IPR003439 GO:0005524
Bhi09g01524 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 15 645 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01524 K05681 ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2 - csv:101214873 1130.93
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01524 Bhi-Chr9:40484192 Bhi12g01423 Bhi-Chr12:45603737 0 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1240 . . . . . . . . . . . Cma09g01112 . . . . Cpe13g00716 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo09g01118 . . . . . Cpe02g00910 Bhi09g01524 . . . . Mch11g1474 . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009054 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 34