Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01565 GAGAAAAATAATGTGGGAATTCGCTGTTGGACTGACATACGAAAAAAACGTGTACCAATTTCTCAAATACAAAATTCCTCCTTCGCCTCGAGGGAGCTGCTGGCTCTGTTCACACTGTGTTTCTTCTTCTTCTTCTTTCGCCTGCAAAATTTGGAATTAGATGAAAATCTGCAGCAATCCATGACCACCCATGAGCCTTCCATCTCCCCGAATGATAACCTGAAAGGTTTTCTTCTTGCTATGTTGTCCAGCGCCTTTATTGGGTCCAGCTTCATCATCAAGAAGTTGGGTCTTCGTCGGGCTGGTGCTTCGGGTTCACGAGCGAGTTCTGGTGGATATGGGTATCTATTAGAGCCCCTTTGGTGGATCGGCATGATTACCATGATTGTTGGGGAGTTTTCCAATTTTGTGGCTTATATTTATGCTCCTGCTATTCTCGTGACGCCACTTGGAGCAATAAGTATAATTGTTAGTGCTGTACTTGCACATTTTTTCTTGAAGGAAAAATTGCAGAAAATGGGTGTATTGGGGTGTATTTTATGTGTTGTAGGGTCTACAATGATTGTGCTCCATGCACCTGGTGAACGTACTCCGAGTTCAGTGGATGAGATATGGGAACTAGCAACTCAACCAACTTTCCTTCTCTATACGGCCTCAGTAATAGCTATTGTGTTGTTCCTGGTGTTGTATTGCGAACCCCGCTATGGACAGACAAACATACTCATTTACATTGGAATATGTTCCATAATTGGATCCTTGACGGTAATGAGCATCAAAGCTATTGGCATTGCAATAAAGCTCACAATGGAGGGTTGGAGTCAGGTTGCTCACTTCCAAACATGGGTCTTTGTAATGGTTGCAATCTCATGCATAATCATTCAGTTGAATTATTTAAATAAGGCTTTGGACACATTTGACACTGCTGTTGTTTCGCCAATTCATTATGCAATGTTCACATCTTTCACGATCTTTGCCAGTGTCATAATGTTTAAGGATTGGTCTGGTCAGAGTGCTAGCAGCATTGCATCAGAACTCTGTGGATTTGTAACCATACTTTCTGGGACCGTGGTCTTGCATGATACAAGATCACCTGATCCTGCTTCCGTTTCAGAGATGTACATGTCTGTCTCTCCTCAAGTGTCGTGGTATTTCCCTGCAAATGGCGATACCTGGAAACGGAAATCTGAAGAAATACTATTGCCAGATTTTGATGCAATCCTCAAACAAGACCATTTCACATGAAATGAAAGGTAATTTATGCACATTACTACTGCATCTCCACTGCATACCACCCAGATGCAACCAAATTTTGGGAGAAATCTGCATATAGTTAGTTTTCTCACATTATTAATGAGTTAATTGGTAGAGCGGTTACTATGGAGTTCTGTTTTCTTTCTCCACTAGGCCGCTTGAGATTGAAGAACAGGTAGGGCTTGTGTGACGTAGTATGTTCGTCGTAACAATTCATTTTGTTCCTAAATAGGTAGCTGGAATTGAAACACAGCTTCTTCCCCTTTCTTTTCACCTTTAGGCCTCACACCCCCCCTCTCATAACATTATTTTGTAAAGTGAACAAAGCTTGTGGATGCAAAATGTAATCTGCTTCGTGTGTATTTTTTTCCACTCATTCCCTTAGCCAAGGAAATGTGAGATATTTTGCTGCTAAAGCTGACTTTTGTAATGCAATTTCTCTGTTGAAAGTTTTGGTTTCCCA 1714 41.42 MTTHEPSISPNDNLKGFLLAMLSSAFIGSSFIIKKLGLRRAGASGSRASSGGYGYLLEPLWWIGMITMIVGEFSNFVAYIYAPAILVTPLGAISIIVSAVLAHFFLKEKLQKMGVLGCILCVVGSTMIVLHAPGERTPSSVDEIWELATQPTFLLYTASVIAIVLFLVLYCEPRYGQTNILIYIGICSIIGSLTVMSIKAIGIAIKLTMEGWSQVAHFQTWVFVMVAISCIIIQLNYLNKALDTFDTAVVSPIHYAMFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSVSPQVSWYFPANGDTWKRKSEEILLPDFDAILKQDHFT 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42052015 42060975 + XM_039041414.1 Bhi09g01565 44182

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01565 353 Pfam Magnesium transporter NIPA 12 302 IPR008521 GO:0015095|GO:0015693|GO:0016021
Bhi09g01565 353 PANTHER UNCHARACTERIZED 11 353 IPR008521 GO:0015095|GO:0015693|GO:0016021
Bhi09g01565 353 PANTHER MAGNESIUM TRANSPORTER-RELATED 11 353 - -
Bhi09g01565 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 131 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01565 K22733 NIPA, SLC57A2S; magnesium transporter - csv:101218768 665.225
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01741 Bhi-Chr5:55959736 Bhi09g01565 Bhi-Chr9:42052015 3.11E-134 dispersed
Bhi05g01742 Bhi-Chr5:55959736 Bhi09g01565 Bhi-Chr9:42052015 3.11E-134 dispersed
Bhi09g01563 Bhi-Chr9:42052010 Bhi09g01565 Bhi-Chr9:42052015 4.41E-174 dispersed
Bhi12g01474 Bhi-Chr12:47591992 Bhi09g01565 Bhi-Chr9:42052015 3.76E-134 dispersed
Bhi09g01564 Bhi-Chr9:42052011 Bhi09g01565 Bhi-Chr9:42052015 0 tandem
Bhi09g01565 Bhi-Chr9:42052015 Bhi09g01566 Bhi-Chr9:42052199 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1289 Blo01g01754 Blo12g00765 . Bda03g00417 Bpe02g00188 . . Bma01g02537 . . Cma01g00941 . . . . Cpe06g00921 . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g00847 . . . . . . Cmo01g00981 . . . . . . . Bhi09g01565 Tan01g2974 . . . . . Cla09g00961 Cam09g1013 Cec09g1016 Cco09g1028 . . Cre09g0976 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000928 3 9 3 2 2 2 4 2 2 2 2 2 3 2 2 4 2 3 3 2 2 2 2 2 2 2 2 6 7 3 86