Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01578 TAAAAGAAAATGGTGAGAAGGATAGTATTCTAATAATCACCAAACCAAGTCTAATAATTCCAACACAGAAACAGCAAAAAGCATATGAGATGAGATGAGATGAGAATATGATAAAGCAAGCACACTCATTGATTCAAATTCACAACGAAACCCAATTCATCGGATTCAGAAGCATTAGCAGAGTCAGATTCTGTTCGTTCGTCCATCATTCCTCCGCCCTCCAAATCACTCCGCTGGGGAATCTCACTTCCACACGTTCCCGCAACCACCATCGCCGGCCCCCCATGGCCGCCTCCGCCGGGGGTAACCCATCATCCACATCTTCATCCTCCTCCAACCCTTTCATTTTCTCCCCCGATTCTCCCCCTAGACTCGCTCTCACACCCCATCAGCTTAAGCTTTGTTCCGAAGCATTCGAGGCCTTCAGGGAGAAGCTTCAGATGCCCGATGTCATCAACCAGGAGTTCGCCCGATTGCAGGCCAAGAGATTAACTGTATCTGATATGAGGAGAAGTTGCTCTGTGGCTCTTGACAATGTTAACATAAGTAAAAATCGCTACACGGATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCGTGTAAGGATTACAGACATTCTGCAAGGGGTTATATCAATGCAAGCTTTATTTCGACTTCCTCTTCAAAAAGCCTTTCTAAATTTATTGCCACACAAGGTCCATTACCACACACTTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTTGTTGATAATTACAAGATGGTAAAGTGTGGAGATTATTTTCAGGCAGAAGATGGTCCGAGAGATTTTGGTAATTTAATTGTCATCTCTAAATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGGTGAACCATAAAGAGTCAGAAGAATCTGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGTTGAAGAGGCTATATCATTTACCTCCCGATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTCACCGGAGACATGTCTGCTTTAGATCTTGTCAGTACCATTTCTACATTTAGGTCCCAGCGAATTGGAATGGTTCAAACACTGGATCAATACTTTTTCTGTTATAGAACTATTGTTGATGAATTAGAAGACCTTATATCTGTTCCACAGTAGAGGCTCGAAGCGTTCTGCAGGATATCGTTTCCAACCCAGTTGCGACTGTTTGTTAATCTTTTAACTGACAGACTAACGGCCAACTATATGTGGGGTTGAGATCTCGCTGTATTAGATGTATTAAAGAGCTTGCAGGGTTTTACCTCAGTGTTGATGAAATCAGCAGCTGTGCTTCCAGGAAGTTCATTTTCTTGAGCAGCCGATTATGAACACTCTTGATACTGGTCACAGTGAATGTGCTAACCAACTAATATTTCTCTTCTAGGGTTCACCATTGATCATTTCAATAATTGCTTAAATTAAACAGAATTTAACCATTTTGAATTCAGGCATTGAATTCTTGAACTTAAAATATTTTGTGGCAAACATTTGCCACCCAACTCAGTGTTGTTGGGTTTATTGGACATCCCTTGCTGAATATCATCGCAAGTTTATCATCTCCTTCAGTTTGACAA 1747 41.73 MIKQAHSLIQIHNETQFIGFRSISRVRFCSFVHHSSALQITPLGNLTSTRSRNHHRRPPMAASAGGNPSSTSSSSSNPFIFSPDSPPRLALTPHQLKLCSEAFEAFREKLQMPDVINQEFARLQAKRLTVSDMRRSCSVALDNVNISKNRYTDVLPFDETRVVLDSCKDYRHSARGYINASFISTSSSKSLSKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNLIVISKWIKSSNSSLILRHLEVNHKESEESVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILTGDMSALDLVSTISTFRSQRIGMVQTLDQYFFCYRTIVDELEDLISVPQ 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42496760 42505881 + XM_039042590.1 Bhi09g01578 44195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01578 394 ProSitePatterns Tyrosine specific protein phosphatases active site. 322 332 IPR016130 GO:0016311|GO:0016791
Bhi09g01578 394 PRINTS Protein tyrosine phosphatase signature 176 183 IPR000242 GO:0004725|GO:0006470
Bhi09g01578 394 PRINTS Protein tyrosine phosphatase signature 194 214 IPR000242 GO:0004725|GO:0006470
Bhi09g01578 394 PRINTS Protein tyrosine phosphatase signature 281 298 IPR000242 GO:0004725|GO:0006470
Bhi09g01578 394 PRINTS Protein tyrosine phosphatase signature 319 337 IPR000242 GO:0004725|GO:0006470
Bhi09g01578 394 PRINTS Protein tyrosine phosphatase signature 352 367 IPR000242 GO:0004725|GO:0006470
Bhi09g01578 394 PRINTS Protein tyrosine phosphatase signature 368 378 IPR000242 GO:0004725|GO:0006470
Bhi09g01578 394 CDD PTPc_plant_PTP1 177 379 - -
Bhi09g01578 394 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 63 391 - -
Bhi09g01578 394 Gene3D Protein tyrosine phosphatase superfamily 93 391 IPR029021 -
Bhi09g01578 394 SMART PTPc_3 115 387 IPR000242 GO:0004725|GO:0006470
Bhi09g01578 394 MobiDBLite consensus disorder prediction 43 79 - -
Bhi09g01578 394 SMART ptp_7 282 384 IPR003595 -
Bhi09g01578 394 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 301 376 IPR000387 GO:0016311|GO:0016791
Bhi09g01578 394 ProSiteProfiles PTP type protein phosphatase domain profile. 116 385 IPR000242 GO:0004725|GO:0006470
Bhi09g01578 394 MobiDBLite consensus disorder prediction 64 79 - -
Bhi09g01578 394 Pfam Protein-tyrosine phosphatase 145 383 IPR000242 GO:0004725|GO:0006470
Bhi09g01578 394 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 94 387 IPR029021 -
Bhi09g01578 394 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 63 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01577 Bhi-Chr9:42496759 Bhi09g01578 Bhi-Chr9:42496760 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01578 - - bhj:120086129 774.237