Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01656 ATCGAAAATAATGTACCAAAGCAAAAGGGTGGAGAGATAAGAGAGAGAGAGTGAATTCTAGAGAGAGAAAATTTTGGTAGTGAGAGAGAGAGAGAGAGAGGAGGGAAAGGGATGGGTCAGATCGTGAAGAGGAAGAAGAAAGGTAGACCATCGAAGGCAGATCTGGCACGGCGGTCCGGTGGAGGACTGACATCGTCGGAATCAGAACCGCGGCGGAGTCTCCGTCGCCGGAATGTGAGGTATAACATCGATTACGACGACTTTCTTGAAGAAGACGATGACGATGAGGAAGAAGACGAGAGGAGGAGAGAGAAGAAGCTTAAGCTTGTTGTGAAGCTGAACCAAGGAAGAGATGGAACGCATCTATCTCCAGTGGACGGACTTTCTAGGTCAGAGGCGCGTGATGCACACGCGCTTGAGTATGGTTCGTCGGCGTCGGAAGGTGAAGAAGATGAACCAGAGAGGAAGCCATTGAAGAAGAGGAGGATTATTGGTGAAGAAGAGGATGAAGATGATGACTACGATGATCAAATTCGTGGAGATGAAAATGAAGACGATGACATTGATGAGGAAAGGGGAAGGAAGGTGGGCTCAAAAGGGTCCGACTCTGTTCCAGGGACTCCCTCAGATCGATCATCCGGGATACCATTACCTGATAAGAAGACATTGGAGTTGATCCTTGACAAACTTCAGAAGAAGGATACTTATGGTGTCTACGCTGAACCAGTTGATCCTGAAGAGCTTCCTGACTATCACGATGTCATTGATCATCCTATGGACTTTGCTACCGTGAGGAATAAGTTGGCCAACGGATCATATTCAACTTTGGAACAATTTGAGAGTGATGTTTTCCTGATATGCTCAAATGCGATGCAATACAATTCACCAGAAACCATTTACCACAAACAGGCACGTTCCATTCAAGAGCTAGCCAAGAAGAAATTCGAGAGAGTAAGAAATGAAGTTGAACGCTCTGAGAAAGAGTTGAAGTTGGAGCAGAGTACGAAATCCAATTCTTACATCAAGAAGCAACCACCAAAGAAACCCTTTTTCAGGACTTTGCAGGAACCCATTGGATCTGATTTTTCCTCAGGTGCAACCCTTGCTGCCACGGGAGATGTACAGAACAGTTCCAATCCAATCCAAGGTGTCGGCTACGAGGTACCTAGCAATATGGACGGGCAAGTAGAGGGTAGTTCCTCCTTCTTTGATGCTACTAATCAGGACAAGGCTGAAGAGCTCTTCTCAGGAAAGGGTCTTCTAGGTAAATTGGGGAGAAAGACATCTGTGCTTGATGACAACCGGCGTGCAACTTACAACATTTCTAATTCACCAGCGCCAAGATCAGAGTCAATATTTTCAACCTTCGAGGATGAAATAAGACAGCTTGTTGCGGTGGGGCTTCATGCGGAGTATTCCTATGCTAGGAGTCTCGCTCGATTTGCTGCAACACTCGGTCCTATTGCGTGGAAAGTTGCCTCCCAGAGGATTGAGCAGGCTGTACCTGTTGGATGTAAATTCGGCCGTGGTTGGGTGGGAGAATATGAGCCACTTCCAACCCCTGTATTAATGTTTGAGAACCACAACAAGAAGGAGCCTGATTTCAATCGTAACTTGCATTCTACCAGCGAATTAAGAAAGGATGGAAAGCCTTCAGATACTCCTTTGCCTAAGAAGGAACATTCTCTTAGTGCACCAAGAACAGAAGTGAATGGTCTTGCTAGAGGATCCACCTTAGATGGGAAGTCATCTTTCTTTAAGTCCACCCCAAATCCCGGTCCTCCTCAGCAAAACCAGCAGACCAAGGATTTTACTGAGGTAGAGAAGATCAAAAAGCAAGTTGAGTTAAATTCCTTGCCCTCACCAAAACAAAATAAAGTTGATCTTGGTGTGGAGAAGCAAGCCAATTCAAACGTGACCAGGTCTAGAGATATGACATCGGTAAACTTAAATCTTGTTCAATCCGTGCCTTATAAACTGCCTGGTGTTAATGGTGGCGTTGTAACTGGGGGATTGCCTAATGGAAAATTCCCGAGCAATTGTTTGAATAGTCCACGGGCTGCTTTATCATCTTCTAGCTTGCCTTCTCAAACGGCCCCAGTGGCAACTTCTCATGGACAGGACCTGGGTCCCAGTAAGCCAGTACAATTGATGAGAATGATGTCTGAAAGAGCCCCAAAACAAGAGAACTTATCCAATCAATCTTCATCTGATTCTCTGCCAACTTTGTCATCAGCTCCTTCCGCAACGAGAGACGATTCTAATAATGCTGCAGCAGTAGCTTCTCGTGCATGGATGTCCATTGGGGCTGGAGGGTTTAAACAAGTCAGAGATAATTCTGCACCTAAAGGTCAAATCTCTGCAGATTCATTATATAATCCAGCTCGGGAATTTCATCCGCAAATGACACGAGCATGGGGGGAGTTTCGTGCTGGAGGCAATCAGCTCCAATCTGAGAAGAGCAATTTCCCTATGCAGGCATTTGTTTCACAAGCCACTCTTGTACCAAATGAACAACAGCTGCAAAACCGGTCCATGATTTACCCTCAGCTAGTCCAGGCTGACATGTCTAAGTTCCAGTTGCAGTCGACTTGGCGAACTCTCAGCCCACATAACCAACCAAGGAAGAAACAGGAAATGCTTCCTCCCGACTTGAATATCGGTTTTCAGTCTCCTGGGTCTCCCGTGAAACAATCCTCTAGTGTTTTGGTTGACTCCCAGCAGCCAGACCTAGCCTTGCAACTTTAAGTGAAGGCTAGTCATGTGAAAAAGATTCTTTCTAGGAACCTGCAACCTTTGGGGATAAAACTGAGACAACCTTTCTTCCATGTTGCACCAAATATGAGCACAAACAGATTATTGGTACGACACAGATGATTTGCATTCGGAACAAACTCAAAAACCTTACCAGTCTTCAATCCGGTATTTATAGGCATCCTGATTTATATATTGGAAATGAGGAATGTCCACAGCAAGCAATATCTATCTGGATGTGGGATGCTGCTTCTGTTGCAGTTGAGGAAAGAATTTTTAGCAGGCGACATTTTTTTTCTTCCAGTTTTCCGATTGCTGTCGAGAAAAAGGACCATCGCTTCACTGCCTTGCAGAAAGTTCCAGACTGGTCCCTAATGTCAGGTATATCCCCCACCATTGAAAATGAATGGAAAGAAAAAAATGATTTGCTTGTCATTGTTTTGAGGTGCTGAAAAAGTTTCTATCTGAGAAATTGAGGATACAGGTTTAGTTTTGCCTTGTAGAGTAGTCACAGGTGGATGGATAAATTAGATTCTCTGTAATTACTTGGATAAAATCCCACTTCCATGTAGTTCTGCTGCTTTAATACATGCAAAATTTACCCAGCAATGCCATAATGTTGTAACTATTGTATGCCAGTTGTGCTGTTTTTGCCAATTAATTTTGATTGTTTATTTGGCTCA 3437 44.46 MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNIDYDDFLEEDDDDEEEDERRREKKLKLVVKLNQGRDGTHLSPVDGLSRSEARDAHALEYGSSASEGEEDEPERKPLKKRRIIGEEEDEDDDYDDQIRGDENEDDDIDEERGRKVGSKGSDSVPGTPSDRSSGIPLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDHPMDFATVRNKLANGSYSTLEQFESDVFLICSNAMQYNSPETIYHKQARSIQELAKKKFERVRNEVERSEKELKLEQSTKSNSYIKKQPPKKPFFRTLQEPIGSDFSSGATLAATGDVQNSSNPIQGVGYEVPSNMDGQVEGSSSFFDATNQDKAEELFSGKGLLGKLGRKTSVLDDNRRATYNISNSPAPRSESIFSTFEDEIRQLVAVGLHAEYSYARSLARFAATLGPIAWKVASQRIEQAVPVGCKFGRGWVGEYEPLPTPVLMFENHNKKEPDFNRNLHSTSELRKDGKPSDTPLPKKEHSLSAPRTEVNGLARGSTLDGKSSFFKSTPNPGPPQQNQQTKDFTEVEKIKKQVELNSLPSPKQNKVDLGVEKQANSNVTRSRDMTSVNLNLVQSVPYKLPGVNGGVVTGGLPNGKFPSNCLNSPRAALSSSSLPSQTAPVATSHGQDLGPSKPVQLMRMMSERAPKQENLSNQSSSDSLPTLSSAPSATRDDSNNAAAVASRAWMSIGAGGFKQVRDNSAPKGQISADSLYNPAREFHPQMTRAWGEFRAGGNQLQSEKSNFPMQAFVSQATLVPNEQQLQNRSMIYPQLVQADMSKFQLQSTWRTLSPHNQPRKKQEMLPPDLNIGFQSPGSPVKQSSSVLVDSQQPDLALQL 878
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44571579 44577551 - XM_039041405.1 Bhi09g01656 44273

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01656 878 MobiDBLite consensus disorder prediction 32 48 - -
Bhi09g01656 878 MobiDBLite consensus disorder prediction 131 151 - -
Bhi09g01656 878 Pfam Bromodomain 188 268 IPR001487 GO:0005515
Bhi09g01656 878 MobiDBLite consensus disorder prediction 1 15 - -
Bhi09g01656 878 MobiDBLite consensus disorder prediction 650 668 - -
Bhi09g01656 878 ProSiteProfiles Bromodomain profile. 194 264 IPR001487 GO:0005515
Bhi09g01656 878 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 878 - -
Bhi09g01656 878 MobiDBLite consensus disorder prediction 832 878 - -
Bhi09g01656 878 CDD Bromodomain 182 278 - -
Bhi09g01656 878 MobiDBLite consensus disorder prediction 494 528 - -
Bhi09g01656 878 SUPERFAMILY Bromodomain 164 286 IPR036427 GO:0005515
Bhi09g01656 878 MobiDBLite consensus disorder prediction 111 130 - -
Bhi09g01656 878 Gene3D - 181 302 IPR036427 GO:0005515
Bhi09g01656 878 Coils Coil 271 298 - -
Bhi09g01656 878 MobiDBLite consensus disorder prediction 689 720 - -
Bhi09g01656 878 MobiDBLite consensus disorder prediction 540 566 - -
Bhi09g01656 878 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 878 - -
Bhi09g01656 878 SMART bromo_6 175 283 IPR001487 GO:0005515
Bhi09g01656 878 PRINTS Bromodomain signature 211 227 IPR001487 GO:0005515
Bhi09g01656 878 PRINTS Bromodomain signature 227 245 IPR001487 GO:0005515
Bhi09g01656 878 PRINTS Bromodomain signature 245 264 IPR001487 GO:0005515
Bhi09g01656 878 MobiDBLite consensus disorder prediction 1 182 - -
Bhi09g01656 878 ProSitePatterns Bromodomain signature. 200 256 IPR018359 -
Bhi09g01656 878 MobiDBLite consensus disorder prediction 650 676 - -
Bhi09g01656 878 MobiDBLite consensus disorder prediction 494 566 - -
Bhi09g01656 878 MobiDBLite consensus disorder prediction 854 878 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01656 K22184 BRD9; bromodomain-containing protein 9 - csv:101204699 1481.46
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01299 Bhi-Chr9:32005773 Bhi09g01656 Bhi-Chr9:44571579 6.41E-09 dispersed
Bhi09g01300 Bhi-Chr9:32005773 Bhi09g01656 Bhi-Chr9:44571579 6.41E-09 dispersed
Bhi09g01656 Bhi-Chr9:44571579 Bhi05g01582 Bhi-Chr5:52652227 8.06E-87 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g527 . . . . Bpe09g00169 . . . . . Cma01g01124 . Car01g00998 Car09g00874 Sed04g3216 Cpe06g00774 Cpe02g00777 Bhi09g01656 Tan01g4563 Cmetu01g2650 . Hepe01g1265 Mch11g1197 . . . . . . . . . . Cone14ag1152 Cone15ag1169 Lsi02g01898 Csa07g01101 . . Blo07g00901 . Bda05g00716 Bda12g00914 . Bpe03g00789 . . . Cmo01g01175 Cmo09g00956 . . . . . . . . . . . . . Cla09g01015 Cam09g1072 Cec09g1072 Cco09g1090 . . Cre09g1036 . . . Cme01g01024
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005656 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 2 1 39