Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01735 TATAAATTCTTAGATCAAATTTTGAATCCAATTCTCAAAATTGGGCTTCTTCAACGGCCGATCCCCACTCGTTTTCCCGGGAAAATACCGATCAATCAGCGCCGGGATAATTTCTTCTCGCCACCATGGATTCCGACTCCTATCTCTTTCATTTCTACTGGAGTATTTCATCGACTTCAACCAATTTCAAGCTGCTCAGTTGGCCTTCTCGTTTCTTAATCAATTAGGGCTTTGAATTTCATCGGTTCTCATTATCTATCATGGGGCACTCACAGATTCATAGAGCATCTGAAAAGCCGAATCTAGATTGGGAAGCAGCACTGACGCAGTATGAAAACGTTATGGCTTCAGAATCCGAGGCTGTTAAAGTGAAAGCCACAATCAAATTGGCCCATCTCTCCAAAAATGCCCCGGAAAATATTTTGAACAGTGCCATACCCTTTATTGCTAAGCATCTTGAAGATAACCCCACCAGTAATTCAAGCCAATCCATGAGAGGAGCTGCTGCATATTGTCTAAGATGTATATCTTGTCAAGGTGATGGTACGTTGGCGGCGGCGGTAGGTCATTCTGGCGCTTTAGAATCTTTGCTGAGGTCATTGCCACATTCTAGTGGTTGTTTTCGTAAGATTCTTGTTAAATGTGTTTGGAGTATTGTTACTTTTGATCAAACTAGTCGTGTGATTATAGCAAGAAATGGGGGTTTGGAAGTTATTATTGGTATGTTTGATTCTGTATTTGATGGCACTAGGAGATATTTATTGGAGATTTTGAGTGCAATGGCACTACTGAGAGAGGTTAGGAAGGCCCTTATTAGTTTAAGAGGCCTCCCTTTTCTTGTTCAAGCTGCTAGATTTGGTTGCATGGCATCCAGAGAAAGAGCTTGTCAAGCAATTGGTTTACTTGCAATTACAAAGCGTGGAAGACGCATGCTTGTTGAGTTGGGAGTTGTTCCAGTGCTTATTGAGCTACTTCGTGAAGGAGATTATGTGACAAAATTGGTAGCTGGTAATTCCCTTGGAGTAGTTTCAGCTCATGTAACCTATATTAGGCCTCTTGCACAAGCTGGGGCCATCCCTTTATTTGCTGAGCTTCTTCAGTGGCCTGATCCTATTGGTAAGGAGATTGCAGAGGATGTCTTCTGTCTCTTAGCTGTAGCTGAAGCGAATGCGGTTGTAATTTCTGATCATCTAGTGAGAATTCTTAAAGAAGGTGATAGTGGAGGAAAGGCTGCAGCTGCTGATGTCTTGTGGGATCTTTCTAGCTATAAGTACTCCATATCAGTTGTGCAGAATTCGGGTGCCATTCCAGTTTTGGTGGATCTATTACACGATGGGAATGATGAAGTAAGGGAAAAAGTCTCTGGAGCTATAGCACAATTAAGTTATAATGAAACAGACAGGGTTGCACTTGCTGATGCAGGGGCAATCCAACGACTAATAGGGCTATTGCAAGATGAGTTAGAAGAAGTGAAAGATAATGTTACTGAGGCCCTTTTAAATTTTTCTGAAGACCCCTTATACTGTACTAGAGTATCTGAAGCAGTCAGCACTCCTGCTTTCCAGAATTTGCAGGAAAGAATGATTCATATTCGTGCTGCTGAAAGGCAAAGCGTGAGGTCCCTGCATCAAATGGGAATCAACCAATTTACAGGAGATCCAGATCTTCTATAACTTTTTGCAGTGATCTCCATCCCTAAAGTTCAAGGAGGAAAAAAAACTGTCCGTAGAAAAGAAAGGAGAAGAAAGTCAGGGTTGGCACCATAACTTGTGCCATTTTATAGAAAGGGTTTCTGTTTGGAATTTGGTTTGTGTTTGCAGGCTTCTGACTCCATCCGCAGGCGTTTTTACTGTAACATAACCACTTGGTTGGCAGTCCCCTCACAGCAGTGTAGTAGCAGAGCAGCTGAGGATGTGTGAATATGCCATGGAAGTAGCTGCCACAGCTTCCAATGGCATCCTAGGAGGAGTCGTACACTCACTGCATGCAATGCCCAAATATCTACTGTTTCATCAGCTAAGCTTCTTTATATCCTGTTTTCATTCTTTATAATTATATGACATGATAGCAATTGCTTGTTTGGATCTCTCCAATTGTTGAATACAGATTATGACACAGAGGTGAAGAGAGAGAAGGGGAAATCTTTAGCTTTTATTCTCATATGCTTCTGTATAGAACGACTTACACATTTTGACTAATTTTATTCCATGGTTATTTGATCTTACTAA 2228 41.47 MGHSQIHRASEKPNLDWEAALTQYENVMASESEAVKVKATIKLAHLSKNAPENILNSAIPFIAKHLEDNPTSNSSQSMRGAAAYCLRCISCQGDGTLAAAVGHSGALESLLRSLPHSSGCFRKILVKCVWSIVTFDQTSRVIIARNGGLEVIIGMFDSVFDGTRRYLLEILSAMALLREVRKALISLRGLPFLVQAARFGCMASRERACQAIGLLAITKRGRRMLVELGVVPVLIELLREGDYVTKLVAGNSLGVVSAHVTYIRPLAQAGAIPLFAELLQWPDPIGKEIAEDVFCLLAVAEANAVVISDHLVRILKEGDSGGKAAAADVLWDLSSYKYSISVVQNSGAIPVLVDLLHDGNDEVREKVSGAIAQLSYNETDRVALADAGAIQRLIGLLQDELEEVKDNVTEALLNFSEDPLYCTRVSEAVSTPAFQNLQERMIHIRAAERQSVRSLHQMGINQFTGDPDLL 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47217395 47224250 - XM_039041707.1 Bhi09g01735 44352

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01735 470 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 469 - -
Bhi09g01735 470 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 347 389 IPR000225 GO:0005515
Bhi09g01735 470 Pfam Armadillo/beta-catenin-like repeat 341 375 IPR000225 GO:0005515
Bhi09g01735 470 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 469 - -
Bhi09g01735 470 Coils Coil 394 414 - -
Bhi09g01735 470 SMART arm_5 377 417 IPR000225 GO:0005515
Bhi09g01735 470 SMART arm_5 259 299 IPR000225 GO:0005515
Bhi09g01735 470 SMART arm_5 218 258 IPR000225 GO:0005515
Bhi09g01735 470 SMART arm_5 177 217 IPR000225 GO:0005515
Bhi09g01735 470 SMART arm_5 47 91 IPR000225 GO:0005515
Bhi09g01735 470 SMART arm_5 336 376 IPR000225 GO:0005515
Bhi09g01735 470 Gene3D - 260 448 IPR011989 -
Bhi09g01735 470 Gene3D - 18 259 IPR011989 -
Bhi09g01735 470 SUPERFAMILY ARM repeat 12 417 IPR016024 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01735 - - - csv:101212744 758.829
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01735 Bhi-Chr9:47217395 Bhi02g02047 Bhi-Chr2:55563195 6.15E-09 dispersed
Bhi09g01735 Bhi-Chr9:47217395 Bhi09g01736 Bhi-Chr9:47217395 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g620 . . . . . . . . . . . . . . . . . Bhi09g01735 . . . . . . . . . . . . . . . . . . Csa07g00960 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012085 0 2 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 0 0 2 4 1 1 1 1 2 29