Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01796 ACAATTCCCAAAATTAAAAATTGGGTCTCTCTCTCATCTCCATATCCTTGATGTTGATTTATTTTTACATATTGAATATCAATCAAGAAACAAAGAAAGAAGAAGAAGAATGGAAGAGAGAGTTAGTTGTGTTTTGGATTAGGTCTCCACGTTGCCATTTCAAATTGGGCGGGCCACTCTGAGCTTCCCCTCTCTTCAACAATGGTGTGTGGCCAACCGCCATTCCCTCTCTTTGCTTTAAATATCTGTCTTTGAGGGCCACTCTGCCCGACACACCCTTCAATCTTGCTAGTTGGATTTGGTGGCCAACCATTTACCTTCTTCCCAAAAAACCAATTGAAATTATACTTTCTTTTGTTTTCTTTCTTTCCCTTATCCCCCCTTTTGAAAACCCCATGTGGGGTTTTGTTTATATCTCTGTATTTTGAATCTTGCAGGAGTATCTGGGTTGGTCTTTAATGGGGGTTTGGAATTACTGATTATGACACAGCAAGATTCGCGGTTCAACTGTTGTAAGAAAGAAAAAAAAAGAAGCGGTTGATTATTGATTCTCTCGTCTTCTTCTTCTTCTCTTTTTGGGGATTTTTTATTTTGCTTTTTTGAAGTTAGGCGAACGCCTTTCGCGTATTTCTAAACCGTTTGTTTGTTGATTTCATTTGGGCTTCTCTGTTTTTTCCTTTTTCTTGAGTTTCTGGTGACCCTCCACGACCCAACATCAACTTCCTGTCTTCTTTTTTTCCAACCGTTTTTGTTGCCTTCTTCTTGCTCTTTATGCCTTTATATACGCTCTGTTTCCAATTCTTTGTTCTTGTGAGATACCCTTTTAAGGCTTCTTTCTGAATTTGCAGTTTTGGGCCTGCACGATAGGTGTTTGATGTTTTGCCTCACTGAATACCTTGTAGTTTGGACATGAGACTTTCATGAATTTGGATTGCTTGCTTTTGTCCCAAAGTGGGTTCCGTTTCTCTTTTAATCATTACGGGCAAATTTTGTGTGATTTTTGTTATCTTCGTGCTTGGACTGGCCCTTTAGTTTTAGTTATCCTTTCATGAGAACCACCCCTTGTTCTTTGCTCATATTTCCAACTTTCTCCATGTCCGTGTAGTTTGTTGTTTTGTTAAGGAGCGTGATTGGTTTTAGTTAGACAAGGCCGTTTTGCGATGATTCATTCTGGTTTCTTCCTTTCGGGACCATCGTTTAATTCTGATGTTACTACGTCTTTCATATCAATTCCGGTCTCTGGAGAAGATGGTGCTAGAGCTGATGAGATCAGCAACCATACGTCTGATTCCATCCCCCCTTCTTTTTGGGTTAGAATGGCGATGAAAATATCTAGAGCTAGATGGTTCATTTTCTTGAGAAGAATTTTCCACTACCAAAACGGATCGAGATCTGATCTTGGGCCGAATCCTTTCAATTCGGGTTTGTGGATGGCGATGGAGCTTGTAGCTCTGTTGTTTCAGCTAATTATCTCAGCGTTTACTCTTGCCATTTCACAAGCTGAGAGGCCAGTTTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGTGTTCTTAGCTTATTGCTTCTCTATGGCCGCCATCGGTATCATTATCTAACACAGGGAGATGGTAACAGTCTTTCAGATATCGAACACGAACAACAGAGGAGCAATGAATCATCTAGGTACTCACATTTGATGAACAAATGCCGCACGTCTCTCGATCTTTTCTTTGCCATATGGTTTGTAATGGGCAATCTTTGGGTCTTCGATTCTCGCTTAGCCTCGTTCCAAAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATGCCATCTGCTACTCTTTCCCATTTATTCTATTTCTGCTGCTATGTTGCTGTGTGCCATTGACTAGTAGCCTTATAGGATACAACATTAACATGGGATCAACCGAAAAAGGAGCATTAGACGATCAAATTTCCCAGCTACCTTGCTGGAGATACAAAGCGGTTGAAACCAACATCAACCCCGGAAGTCAACCCGATAATAGCAATACAGGACTTCCAAAAGAGGATCCAGAATGTTGCATTTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAGTTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTACATCTTCATGCCCTCTTTGTAAGCAACAACTTCAAAGTTAAGAGAGCCAAGAAAGCAGAAGCAGTTCAAGTGCTTCTTTGGGTTTTTTCTTTTCTTTTTCCCTTCCAAATGGAAATTTTCTCATTTTCACTGTTTTTGTGATTTAGTCATTAGATTAGAGTCTCCCATGGTTACTTGAGTGAGTTTTAGTGCTCACCAGTTACCTAAATATACTGAAATATTGAAGGTTACACATAACAGGAAAATGATGCCTTATTTGTAGATATTGTGAGAACTATAGTATTTGCCCAATGAATACAAACCAAGTGTGCTTTTTCCCTCTTTA 2488 40.15 MIHSGFFLSGPSFNSDVTTSFISIPVSGEDGARADEISNHTSDSIPPSFWVRMAMKISRARWFIFLRRIFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISAFTLAISQAERPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLTQGDGNSLSDIEHEQQRSNESSRYSHLMNKCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCCVPLTSSLIGYNINMGSTEKGALDDQISQLPCWRYKAVETNINPGSQPDNSNTGLPKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQS 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 48900440 48903415 + XM_039043217.1 Bhi09g01796 44413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01796 347 Pfam Ring finger domain 300 342 IPR001841 -
Bhi09g01796 347 CDD RING-H2_RNF111_like 299 342 - -
Bhi09g01796 347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 347 IPR013083 -
Bhi09g01796 347 SMART ring_2 301 341 IPR001841 -
Bhi09g01796 347 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 38 346 - -
Bhi09g01796 347 SUPERFAMILY RING/U-box 296 345 - -
Bhi09g01796 347 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 38 346 - -
Bhi09g01796 347 ProSiteProfiles Zinc finger RING-type profile. 301 342 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01041 Bhi-Chr4:25945102 Bhi09g01796 Bhi-Chr9:48900440 4.61E-54 dispersed
Bhi09g01796 Bhi-Chr9:48900440 Bhi09g01798 Bhi-Chr9:48905467 9.21E-175 dispersed
Bhi09g01796 Bhi-Chr9:48900440 Bhi09g01797 Bhi-Chr9:48905467 9.21E-175 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01796 - - csv:101217150 639.417