Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01798 AAAAAATTGGTATTGATTTTTTAATGATGAAAAAAGCAGTTGAAGGAGGAGGAGGAATTGCGGTTTGACAGTTGAAGGAAACGGTCGATTGTTGAGCTTTGCTTGCTTTCTTAACAAAAACCTGCAACAAAGTTAGGCCAATCCAATCCAATTCAATCCAATCCTTGACGCCATCTTCCTCAAAAACTCTGATTCACTTTCAATCAAAGTTACCCACTTCTCCTTCCTTTTCTCCGGTTGATCTTCAGTCCCCATCTCTCTGTTTTCACCTTCCTCTCCTTTTCCTCCACCATTTCCGAAACCTCCCATTTCCTTCTATTTACACTTCCATGTCCCCTTTTCCCTCTTTCTTTCCCCTTTTCCCCATTGCCTTTGAGGCTTATTCAAGTTTCCCCTCAAAACCCAACTGCCTGATCCTCGTGGGTTTTTTCTGGACTGTGACGGTTGATAAGTTCGGGTGCTGAAGCTTGGAGTAAGTGTTCTGATTTTGTGCACGGTTGGTGTTTGATGTTTTGCCTAGCTGAGTGGTCATATGGTTGGGGCTTGGAGTTTTCATGATTCCGAATACCGAATTTGTTGTTTGTTTTGTTTCAATCACTGTGGGAGAAAGTTCGGTGGTTTTGACTGTCATGATTGTCAAGTTGGTTCTTGAATTTCCATGAGAACACTCTGTTTTCTATGATTGCTGAGTTGTTCTTTTGTGTTGTACCAGATAAGGGAAGGTTGTTTTCGATGATAAATTCTGGTTATTTTGTTTCGGGGCCATCGTGTAACTGTGGTGGCACTGCTTCCTTTATCTCGAATTCATTGGTGGAAGAAGATGGTGCGGGTGAGGATGTAAGAGACGATAATTCTGTTGCTCTCCCTGCATCTTTCTGGGTTAGGATAGCGATGAGAGTGTCTAGAGCCAGGTGGTTCATTTTCTTACGAAGGGTATTTCACTACCAGAATGGATCAAGATCGGATCTCGGATCTGATCCTTTCAATTCTAGTTCGTGGATGGCTATGGAGCTGGTAGCTATGGTGTTTCAGCTGGCCATCACAGTGTTTTTTCTTGCCATTTCAGAGACTGAGAAGCCAGTTTGGCCTATGAGACTGTGGATAGTCGGTTATGATCTTGGCTGCATTCTTAGTTTGTTGCTTCTCTACGGGCGATATTGGCATCTTTATTTAATGCGTGGAGAGCATGTCGGCCTTCCTGACACCGAGCAGCGGAGGAGCAGTCGAGCATCAAGGAGCTTACATCTGATGAACAAATGCCGGTCATCTCTTGAACTTTTCTTTGCAATATGGTTCGTAATGGGTAATGTTTGGATTGTCGATTCTCGCTTCAGTTCTTTCCAAAGAGCTCCCAAGCTTCATCTGCTATGCGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCCTTTCCATTCATTCTTTTTCTGCTGCTATGTTGCTGTGTGCCATTGGTTAGTAGCCTTCTAGGATATAATATTAACATGGCGTCAACTGACAAAGGAGCATCGGATGATCAAATATCCCAGCTACCGTGCTGGAGATATAACACGGTCTCAATGGAAGCTGATAGTAATAAAGGACTTCGAAAAGAGGATCCAGAATGTTGCATTTGCCTTGTCAAGTACAAAGATGAAGAAGAAGTAAGACAGTTACCTTGTTCCCATTTGTTCCATCTCAAGTGTGTGGATAAGTGGCTTTCAATTACATCTTCCTGCCCTCTCTGTAAACAGCAACTTCAGAGATAGATAGATAGAAAAAAAAAAAAAAAAAAAAA 1775 42.48 MIAELFFCVVPDKGRLFSMINSGYFVSGPSCNCGGTASFISNSLVEEDGAGEDVRDDNSVALPASFWVRIAMRVSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMRGEHVGLPDTEQRRSSRASRSLHLMNKCRSSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLVSSLLGYNINMASTDKGASDDQISQLPCWRYNTVSMEADSNKGLRKEDPECCICLVKYKDEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 48905467 48907998 + XM_039041319.1 Bhi09g01798 44415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01798 355 CDD RING-H2_RNF111_like 307 350 - -
Bhi09g01798 355 SUPERFAMILY RING/U-box 308 353 - -
Bhi09g01798 355 SMART ring_2 309 349 IPR001841 -
Bhi09g01798 355 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 46 354 - -
Bhi09g01798 355 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 354 IPR013083 -
Bhi09g01798 355 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 46 354 - -
Bhi09g01798 355 Pfam Ring finger domain 308 350 IPR001841 -
Bhi09g01798 355 ProSiteProfiles Zinc finger RING-type profile. 309 350 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01796 Bhi-Chr9:48900440 Bhi09g01798 Bhi-Chr9:48905467 9.21E-175 dispersed
Bhi09g01798 Bhi-Chr9:48905467 Bhi09g01800 Bhi-Chr9:48905468 0 dispersed
Bhi09g01797 Bhi-Chr9:48905467 Bhi09g01798 Bhi-Chr9:48905467 0 tandem
Bhi09g01798 Bhi-Chr9:48905467 Bhi09g01799 Bhi-Chr9:48905468 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01798 - - bhj:120085372 696.041