Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01800 AAAAATTGGTATTGATTTTTTAATGATGAAAAAAGCAGTTGAAGGAGGAGGAGGAATTGCGGTTTGACAGTTGAAGGAAACGGTCGATTGTTGAGCTTTGCTTGCTTTCTTAACAAAAACCTGCAACAAAGTTAGGCCAATCCAATCCAATTCAATCCAATCCTTGACGCCATCTTCCTCAAAAACTCTGATTCACTTTCAATCAAAGTTACCCACTTCTCCTTCCTTTTCTCCGGTTGATCTTCAGTCCCCATCTCTCTGTTTTCACCTTCCTCTCCTTTTCCTCCACCATTTCCGAAACCTCCCATTTCCTTCTATTTACACTTCCATGTCCCCTTTTCCCTCTTTCTTTCCCCTTTTCCCCATTGCCTTTGAGGCTTATTCAAGTTTCCCCTCAAAACCCAACTGCCTGATCCTCGTGGGTTTTTTCTGGACTGTGACGGTTGATAAGTTCGGGTGCTGAAGCTTGGAATAAGGGAAGGTTGTTTTCGATGATAAATTCTGGTTATTTTGTTTCGGGGCCATCGTGTAACTGTGGTGGCACTGCTTCCTTTATCTCGAATTCATTGGTGGAAGAAGATGGTGCGGGTGAGGATGTAAGAGACGATAATTCTGTTGCTCTCCCTGCATCTTTCTGGGTTAGGATAGCGATGAGAGTGTCTAGAGCCAGGTGGTTCATTTTCTTACGAAGGGTATTTCACTACCAGAATGGATCAAGATCGGATCTCGGATCTGATCCTTTCAATTCTAGTTCGTGGATGGCTATGGAGCTGGTAGCTATGGTGTTTCAGCTGGCCATCACAGTGTTTTTTCTTGCCATTTCAGAGACTGAGAAGCCAGTTTGGCCTATGAGACTGTGGATAGTCGGTTATGATCTTGGCTGCATTCTTAGTTTGTTGCTTCTCTACGGGCGATATTGGCATCTTTATTTAATGCGTGGAGAGCATGTCGGCCTTCCTGACACCGAGCAGCGGAGGAGCAGTCGAGCATCAAGGAGCTTACATCTGATGAACAAATGCCGGTCATCTCTTGAACTTTTCTTTGCAATATGGTTCGTAATGGGTAATGTTTGGATTGTCGATTCTCGCTTCAGTTCTTTCCAAAGAGCTCCCAAGCTTCATCTGCTATGCGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCCTTTCCATTCATTCTTTTTCTGCTGCTATGTTGCTGTGTGCCATTGGTTAGTAGCCTTCTAGGATATAATATTAACATGGCGTCAACTGACAAAGGAGCATCGGATGATCAAATATCCCAGCTACCGTGCTGGAGATATAACACGGTCTCAATGGAAGCTGATAGTAATAAAGGACTTCGAAAAGAGGATCCAGAATGTTGCATTTGCCTTGTCAAGTACAAAGATGAAGAAGAAGTAAGACAGTTACCTTGTTCCCATTTGTTCCATCTCAAGTGTGTGGATAAGTGGCTTTCAATTACATCTTCCTGCCCTCTCTGTAAACAGCAACTTCAGAGATAGATAGATAGAAAAAAAAAAAAAAAAAAAAA 1534 42.89 MINSGYFVSGPSCNCGGTASFISNSLVEEDGAGEDVRDDNSVALPASFWVRIAMRVSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMRGEHVGLPDTEQRRSSRASRSLHLMNKCRSSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLVSSLLGYNINMASTDKGASDDQISQLPCWRYNTVSMEADSNKGLRKEDPECCICLVKYKDEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 48905468 48907998 + XM_039041322.1 Bhi09g01800 44417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01800 337 CDD RING-H2_RNF111_like 289 332 - -
Bhi09g01800 337 Pfam Ring finger domain 290 332 IPR001841 -
Bhi09g01800 337 ProSiteProfiles Zinc finger RING-type profile. 291 332 IPR001841 -
Bhi09g01800 337 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 28 336 - -
Bhi09g01800 337 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 28 336 - -
Bhi09g01800 337 SUPERFAMILY RING/U-box 290 335 - -
Bhi09g01800 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 336 IPR013083 -
Bhi09g01800 337 SMART ring_2 291 331 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01798 Bhi-Chr9:48905467 Bhi09g01800 Bhi-Chr9:48905468 0 dispersed
Bhi09g01800 Bhi-Chr9:48905468 Bhi11g02769 Bhi-Chr11:74033994 7.79E-36 dispersed
Bhi09g01799 Bhi-Chr9:48905468 Bhi09g01800 Bhi-Chr9:48905468 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01800 - - bhj:120085372 659.833