Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01941 TGTGTATGAGTGGGAGTGAGAGAGAGGGAGGCAATATTTAATGCAAAAACAATGACCAAGAACACCAATCCAAGAACAAATGTCCTGGAGAAAAACAATGTAAATAGAATATAATAGTATTTTCTTCTCTCTCTCTGTCTCCTCTTCTCTCCCAGTGGTTGCATCTGATTTTGTTCTTATTTTCTATTAGTTTTAAGTCATCTAACAAGGATGACAGTTTAACATTTAGCCTCAAAACAACAAAGTCTTATTGCTTCATAGTCTCCTAAGTGCAGTCCTTTTGGCCTTATGCATTAGGAAGGGAGCAAAAATTGCAGGCAGAAAATGCTTGGTTTTGGAGGTGTAAACAACTAGAAGAAACCACACATAAACATAACCATGGCCATACAAACCAGTCCAAAAGGCAGAAGAAAAAAAATAGGGGAAAAAACACTCAACCTATCATATCATTGAAGAATCTCAAATTAACAATCTTCATTTTCTAAATTTTGTAAATACATTTCTGATTCACTTGTGTTTTTCAATAACCAGAAAGAAGAATCAGTCTACCAAGTGCTTGAAATTGCTTGCAGACAAACAAATAGTACATCCAAAAAATTGACGTTTCAGGAATCACTATGTCTGCCGGCTAGGCTCAAATATAAAGTCATTCTTATCTCACCTGGCATTGGCTATATCAGAAAATGAAAGAGATCATGCAACAGATCAAGCCTGCCAGTTTTTCTAGATAGCTTAGGAATACTGCATACCTTGAATAATCTCCAAATCTGCTTCTCCTCTCTCTCCTTCTAGACCACAGAACCAGAAAAATGGCAGGCAAAAGCATGTTCCGCTACGCTGATAGCATCGACAAGTTTTTTATGTTTTTTGGGACTCTGGGCAGCATAGGAGATGGGATACAGGTTCCTCTCATGATGTATATTCTTAAGGATGTGATCAATGCTTATGGAGATAAAAACCGTGGCTTGACAAACGATATGGTTGACACGTTCGCACTGCGTCTACTTTATACTGCAATTGGAGTTGGACTTTCAGCCTTTGTAGGTGAGCATATTTGCTGGAATATATTCATGGGGTAAGAGGAGGGATTGTGTTGGGCAAGAACAGCCGAGAGACAGACATCTAGGATGAGAATGGAATATTTGAAATCTGTGCTTAGACAAGAAGTTAGCTTCTTTGATACCCAAACTGGTTCGACAACTCATGAGGTTGTCTCCCTCATTTCCTCTGATGCCAGTTCAATCCAAGTTGCCTTATGTGAAAAGATACCTGATTGCCTTGCTTACATGTCAACATTTTTCTTCTGCCACATATTTGCTTTTGTAGTATCATGGAGATTCACATTTGCAGTCATCCCACTCTCAGTCATGTTCATTGGTCCAGGGCTCATGTTTGGCAAAATTATGATGAACCTGATAATGAAGATGATTGAATCTTATGGTGTTGCTGGTGGGATTGCAGAGCAAGCGATATCTTCAATAAGAACAGTCTATGCAAATGTAGGAGAAAATCAAACACAGGAAAAATTCAGCCAAGCACTCCAAAAAAGTATGGAATTTGGGATTAAGTCCGGTTTTGTGAAGGGATTGATGCTTGGAAGTATGGGAATCATTTACGCTGGTTGGGGTTTCCAAGCTTGGGTTGGCACTTATTTGATTACTGAGAAGGGAGAAAAAGGAGGCAATATTTTCATAGCTGGTTTCAATGTTCTAATGGGAGGACTGAGTATATTGAGTGCACTTCCTCATCTAACCTCCATCACAGAGGCAACATCTGCAACTGCTCGTATCCTTGAAATGATTGATCGTGTTGCAGAGACAGACAGAGAAGACAAAAAGGAGAAAGCCCTATCACACATGAAAGGAGAAATTGAATTCCAAAACGTATATTTTAGCTATCCATCAAGGCCAGATACGCTTGTATTACAAGGATTCAATCTGAAGGTTCCAGCGGGGAAGAGAGTAGGCCTCGTTGGAGGAAGTGGATCTGGCAAGTCCACAGTTATCTCACTGCTTGAAAGGTTTTATGATCCCACTGATGGAGAAATACTCTTGGATGGACATAAAATAAAAAGATTCCAGCTAAAATGGTGGAGATCTCAAATGGGTTTGGTGAATCAGGAACCTGTTCTATTTGCAACTTCAATAAAAGAGAACATAATGTTCGGAAAAGATGGAGCTTCAATGGAACAAGTGATAAATGCAGCTAAAGCTGCAAATGCACACGACTTCATTGTTAAGCTGCCAGAAGGTTATGATACTCGAGTCGGTCAGTTTGGTTTCCAAATGTCTGGAGGTCAAAAGCAACGGATTGCCATTGCAAGAGCTCTTCTTCGGGACCCAAAAATACTGCTACTTGATGAAGCAACCAGTGCACTGGATGCACAATCAGAACGAATGGTACAGGAAGCAATTGATAAGGCATCAAAAGGAAGGACGACAATCACCATTGCACATCGTCTTTCAACAATACAAACAGCACATCAAATTGTGGTTCTTAAAGCTGGGGAAGTAATTGAATCAGGTTCACACAATGAGCTGATGTTGTTGAACAATGGACAGGGTGGGGAGTATCTACGGATGGTGCAGTTGCAGCAGATGGCAGTGCAGAATGAAACATTCTATGATTCCAATATTGAAATGGATAGAAGATATCGCCATAGGATGAGTGCTCCCACAAGCCCAATCAGTGTGAAGTCGAGTGGACATAATACTCCAGTATTATTTCCCTTCAGCACAGCAATGTCCATCTCCATGGGTACACCCTACTCTTACTCTGTCCAATTCGATCCTGATGATGAAAGCTTTGAAGAAGATAAAAAACATCCAGCTTATCCTTCTCCTTCCCAGTGGCGTTTGCTGAAAATGAACGCACCTGAATGGAGACGAGCGCTGCTTGGATGTTTAGGTGCTCTAGGCTCAGGAGCAGTTCAACCCATTAATGCATACTGTGTAGGAGCACTCATATCAGTATATTTTCGTGCTAATGAGCCCAACATTAAGTCTAAATCTAGAAACTTGTCACTTGTCTTCTTAGGCATTGGCATTTTCAACTTCTTAACAAATATCCTACAACACTACAATTTTTCAATCATGGGAGAAAGACTTACCAAGCGGGTGCGTGAGAAGATACTTGAAAAGCTTATGACATTTGAAATTGGATGGTTTGATCAAGATGAAAACACAAGTGCAGCCATTTGTGCAAGGTTATCAACTGAAGCCAACATGGTCCGTTCCCTCGTTGGAGACAGAATGTCACTACTGGTTCAAGCAATTTTTAGTGCAGCCTTTGCTTACAGTGTGGGACTTGTGCTCTCGTGGAGGTTAACTCTGGTGATGATTGCAGTGCAACCACTAGTCATTGGTAGCTTCTATGCAAGGAGTGTGTTGATGAAAAGCATGGCTGAAAAAGCCCGAAAAGCACAGAGAGAAGGAAGCCAACTTGCAAGTGAAGCTGTAACAAACCATAGAACTATCGTTGCATTCTCATCTCAGAAAAAGATACTTGGGCTCTTTGCTGCTACCCTGAAAGCTCCTAAGGAAGAGAGTGCTAGACAATCTTGGATATCTGGCCTTGGCCTGTTCAGTTCCCAGTTCTTCAACACTGCTGCAACAGCTTTGGCCTATTGGTATGGTGGGAGGCTATTGACACAAGATATGATATCCTCAGAACACATCTTTCAAGCATTCTTGATATTGCTATTTACTGCATACATCATAGCAGACGCTGGAAGCATGACTTCTGATATATCTAAAGGAAGCAATGCTGTTGGATCAGTTTTTGCAATCCTAGACAGGAAGACTGAAATTGATCCAGAGAACAAATCAGGGCGAGATCTCAAAAGACGGATAAAGGGTAAAGTGGAGCTCAGGAATGTTTGCTTCTCATATCCAACAAGACCAGAACAGATGGTTTTAAGGGGACTGAGCCTTAAAATTGATGCAGGAAAAACAGTTGCTCTGGTGGGGCAGAGTGGTTCTGGAAAATCTACTATTATTGGACTTATTGAAAGGTTCTACAATCCCTCAAGCGGATCTATACACATTGACGAGCATGATATTAAGAACTACAATTTGAGATGGTTAAGGTCACAAATTGCATTAGTCAGTCAAGAGCCAACTCTTTTTGCTGGAACTATCAGAGAAAACATTGCCTATGGAAAAGAGGAGGCAGGGGAATCAGAGATCAGAAAAGCAGCTGTTCTAGCCAATGCCCATGAATTTATAAGTGGAATGAAAGATGAGTACGATACATACTGCGGAGAGCGAGGAGCTCAGCTATCAGGAGGGCAAAAGCAAAGAATCGCACTGGCTCGAGCAATCCTGAAGAACCCATCAATCCTGCTGCTAGATGAGGCAACAAGCGCACTGGACAGTGTATCAGAGAATTTGGTGCAGGAAGCCCTAGAGAAGATGATGGTTGGGAGAACTTGCATAATTGTTGCTCACCGATTATCGACGATCCAGAAGGCGAACACCATCGCGGTGATCAAGAACGGGAAGGTCGTGGAACAAGGATCGCACAGTGAGCTGATTTCAATGGGGCAACGTGGAGAGTACTATTCTTTGACAAAATCGCAGGCCGCATTGAATCTTTGAGAATTCATATGGGGTTTTTTAGGGTTTAAACTTGTTGCAATTGTAAGTCTTTTTGTGGGATGGAAGAGGAATTGAATCAGTCTGCTTAATTCTTGTGAATATGATGATGATGAGAATGAACCCACATGAAATTAGAAATTT 4739 41.25 MAGKSMFRYADSIDKFFMFFGTLGSIGDGIQVPLMMYILKDVINAYGDKNRGLTNDMVDTFALRLLYTAIGVGLSAFVGEHICWNIFMGXEEGLCWARTAERQTSRMRMEYLKSVLRQEVSFFDTQTGSTTHEVVSLISSDASSIQVALCEKIPDCLAYMSTFFFCHIFAFVVSWRFTFAVIPLSVMFIGPGLMFGKIMMNLIMKMIESYGVAGGIAEQAISSIRTVYANVGENQTQEKFSQALQKSMEFGIKSGFVKGLMLGSMGIIYAGWGFQAWVGTYLITEKGEKGGNIFIAGFNVLMGGLSILSALPHLTSITEATSATARILEMIDRVAETDREDKKEKALSHMKGEIEFQNVYFSYPSRPDTLVLQGFNLKVPAGKRVGLVGGSGSGKSTVISLLERFYDPTDGEILLDGHKIKRFQLKWWRSQMGLVNQEPVLFATSIKENIMFGKDGASMEQVINAAKAANAHDFIVKLPEGYDTRVGQFGFQMSGGQKQRIAIARALLRDPKILLLDEATSALDAQSERMVQEAIDKASKGRTTITIAHRLSTIQTAHQIVVLKAGEVIESGSHNELMLLNNGQGGEYLRMVQLQQMAVQNETFYDSNIEMDRRYRHRMSAPTSPISVKSSGHNTPVLFPFSTAMSISMGTPYSYSVQFDPDDESFEEDKKHPAYPSPSQWRLLKMNAPEWRRALLGCLGALGSGAVQPINAYCVGALISVYFRANEPNIKSKSRNLSLVFLGIGIFNFLTNILQHYNFSIMGERLTKRVREKILEKLMTFEIGWFDQDENTSAAICARLSTEANMVRSLVGDRMSLLVQAIFSAAFAYSVGLVLSWRLTLVMIAVQPLVIGSFYARSVLMKSMAEKARKAQREGSQLASEAVTNHRTIVAFSSQKKILGLFAATLKAPKEESARQSWISGLGLFSSQFFNTAATALAYWYGGRLLTQDMISSEHIFQAFLILLFTAYIIADAGSMTSDISKGSNAVGSVFAILDRKTEIDPENKSGRDLKRRIKGKVELRNVCFSYPTRPEQMVLRGLSLKIDAGKTVALVGQSGSGKSTIIGLIERFYNPSSGSIHIDEHDIKNYNLRWLRSQIALVSQEPTLFAGTIRENIAYGKEEAGESEIRKAAVLANAHEFISGMKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEKMMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQAALNL 1262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 54027335 54033586 - XM_039042324.1 Bhi09g01941 44558

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01941 1262 CDD ABC_MTABC3_MDL1_MDL2 1018 1257 - -
Bhi09g01941 1262 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 354 590 IPR003439 GO:0005524
Bhi09g01941 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 345 595 IPR027417 -
Bhi09g01941 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1012 1257 IPR027417 -
Bhi09g01941 1262 CDD ABC_6TM_Pgp_ABCB1_D2_like 684 1000 - -
Bhi09g01941 1262 Gene3D ABC transporter type 1, transmembrane domain 92 991 IPR036640 GO:0005524|GO:0016021
Bhi09g01941 1262 Gene3D - 352 608 IPR027417 -
Bhi09g01941 1262 CDD ABC_6TM_Pgp_ABCB1_D1_like 18 327 - -
Bhi09g01941 1262 CDD ABC_MTABC3_MDL1_MDL2 354 595 - -
Bhi09g01941 1262 ProSitePatterns ABC transporters family signature. 493 507 IPR017871 GO:0005524
Bhi09g01941 1262 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 19 319 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi09g01941 1262 Pfam ABC transporter transmembrane region 696 967 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi09g01941 1262 Pfam ABC transporter transmembrane region 18 304 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi09g01941 1262 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 10 1258 IPR039421 -
Bhi09g01941 1262 ProSitePatterns ABC transporters family signature. 1157 1171 IPR017871 GO:0005524
Bhi09g01941 1262 SUPERFAMILY ABC transporter transmembrane region 4 333 IPR036640 GO:0005524|GO:0016021
Bhi09g01941 1262 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1018 1254 IPR003439 GO:0005524
Bhi09g01941 1262 SMART AAA_5 1045 1237 IPR003593 -
Bhi09g01941 1262 SMART AAA_5 381 567 IPR003593 -
Bhi09g01941 1262 Gene3D - 1009 1261 IPR027417 -
Bhi09g01941 1262 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 695 982 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi09g01941 1262 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 10 1258 - -
Bhi09g01941 1262 Pfam ABC transporter 1036 1185 IPR003439 GO:0005524
Bhi09g01941 1262 Pfam ABC transporter 372 521 IPR003439 GO:0005524
Bhi09g01941 1262 SUPERFAMILY ABC transporter transmembrane region 682 1001 IPR036640 GO:0005524|GO:0016021
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01941 K05658 ABCB1, CD243; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] - csv:101213474 2325.05
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00210 Bhi-Chr2:4170841 Bhi09g01941 Bhi-Chr9:54027335 1.30E-10 dispersed
Bhi02g00211 Bhi-Chr2:4170848 Bhi09g01941 Bhi-Chr9:54027335 8.53E-22 dispersed
Bhi06g00463 Bhi-Chr6:10620765 Bhi09g01941 Bhi-Chr9:54027335 0 dispersed
Bhi09g01941 Bhi-Chr9:54027335 Bhi11g02069 Bhi-Chr11:58933531 1.05E-101 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g448 . Blo03g01437 . . . . . . . . . Cma09g00928 . . . . . Bhi09g01941 . . . Hepe01g1307 Mch11g1155 . . . . . . . . . Cone9ag0100 . . . . Chy04g00994 . . . . . . . . . . . Cmo09g00924 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000338 3 4 5 4 3 4 2 4 4 4 4 4 7 4 4 8 4 5 4 4 4 4 6 4 4 4 7 6 4 8 136