Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi09g01946 | AGCCCATACCCAAAATAATAACTACGCGTTTGGATGACGTATTTCTCCCACTCGATCCCAATATGGCCGATCATCTGCCAGCAATACTCCAAAATCCCTAATCTTCTCCAAATTTTATCGTCCCCTTAAAATTCATCTCCTTCAGTCGCACGACCCCTAACCCTAACTTTGGTTCTGTAATTCCTCTACAATCATCATTCCCGTGTTTCTTCCAATTTTTCTGGCCGGAAATTTTGAATTTTTCCGGCGATCCCACGTTTTTTTTTTCAATAATTGTTTGAGAAATGGTATCCCCCGAAAATCCCAATTGGTTGTTTGATTATGGTTTGATCGACGACATCCCTGTACCAGATGCGAATTTCCCGGTCACGAGTTCAAGCTTCTCCTGGTCTATTCAGCCCTTTAACGGCACTCCTGATCCCGGTGTGGAAATTGATGGATCGTTGGCAGATCTTGATGGTCGTCTAGAATCTGGCTCAAAGAAGAGGGTCAGATCTGATTCATGTAGTGCATCAAGCTCCAAAGCTTGTAGGGAGAAATTGCGGAGGGATAGGCTCAATGACAAGTTTCTGGAACTGAACTCCATTTTGGATCCTGGAAGACCACCCAAAACTGACAAAGCTGCAATTTTAGTTGATGCGGTTCGAATGGTGAATCAGTTGCGTAGCGAAACCCAGAAACTAAAAGAATCGAATTCAAGTCTCCAGGAGAAGATTAAAGAGTTGAAGGCCGAGAAGAATGAGCTTCGCGACGAGAAGCAGCGGCTCAAGGCAGATAAGGAGAGGCTAGAACAGCAAGTCAAGTCGATGCCTGCTCAACAACCTGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGTGTCAAGCTCCTGGCAGTAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTTGCCATGTGGCAGTTCATGCCACCTGCTGCGGTGGACACGTCACAGGATCACATACTCCGGCCACCCGTCGCTTAACTTGGTAGCAACCAAGGTTGCCATGAAGAAACCATTGGCAGCATCTGATTGGTTGGGATTTTGCCCCGGACCTTCATGTTTATTCTGCCATTGTAGACTAATGTATTAGTATTTTTAGTTAGTAGGTTCGCTTGTCAATTGATTTTGGGGCGGTCTATGTTATTTGTCATTGGATACTTGAAAGAACCTTACTGTTTTAAGTTTTGTAATTGTAAATGTGAATAAGCGAGTGATTTGGTAA | 1233 | 44.44 | MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWSIQPFNGTPDPGVEIDGSLADLDGRLESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELNSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQCQAPGSKLVPFIGYHPSVAMWQFMPPAAVDTSQDHILRPPVA | 235 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 54313939 | 54316924 | - | XM_039044334.1 | Bhi09g01946 | 44563 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi09g01946 | 235 | Pfam | Helix-loop-helix DNA-binding domain | 79 | 126 | IPR011598 | GO:0046983 | |
Bhi09g01946 | 235 | Gene3D | - | 66 | 124 | IPR036638 | GO:0046983 | |
Bhi09g01946 | 235 | CDD | bHLH_AtILR3_like | 83 | 155 | - | - | |
Bhi09g01946 | 235 | Coils | Coil | 123 | 178 | - | - | |
Bhi09g01946 | 235 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 75 | 146 | IPR036638 | GO:0046983 | |
Bhi09g01946 | 235 | CDD | bZIP | 141 | 173 | - | - | |
Bhi09g01946 | 235 | SMART | finulus | 81 | 132 | IPR011598 | GO:0046983 | |
Bhi09g01946 | 235 | PANTHER | TRANSCRIPTION FACTOR ILR3 | 1 | 235 | - | - | |
Bhi09g01946 | 235 | Gene3D | arf6 gtpase in complex with a specific effector, jip4 | 125 | 179 | - | - | |
Bhi09g01946 | 235 | PANTHER | BHLH TRANSCRIPTION FACTOR | 1 | 235 | IPR044818 | GO:0003700|GO:0006355|GO:0046983|GO:0055072 | |
Bhi09g01946 | 235 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 75 | 126 | IPR011598 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi09g01946 | Bhi-Chr9:54313939 | Bhi11g00654 | Bhi-Chr11:15317417 | 2.59E-121 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
1922 | PF00010 | HLH | 8.40E-10 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi09g01946 | - | - | csv:101215402 | 433.721 |