Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01950 AGATAGAGAGAGAGAGAGACCAAAAACAAACGTGGCTTCATGATCTTCATCTTGTAAAGAACAAGTCACATGCTTCCCATCTGATTCCCCAAAACCCCATTTCAAAAATTTTCACACTCCTCCATTGATTACAGAGTAAAATAACAAGGCCAGGAATCCGTGCTTTTCTTTACCAAACAAGAACAACCCATTAAAATCTCTGCTCAGTAGCTCCAAAATCCCATTACCACCTTCATTTTCCACCCAAAATCTCTCTTTCTGGATAGCTTTTCCAAATTACACTTCAAATCTTTACTCCCCATAACCCCATTTCTCCATTTCTATACATTTCCTACAATCCATTTTCTTTTCTCTCTCTGGGAGCTCATCAATCTTTCCTGCTCGTTCAAGCAAGCGGCTGCAGTACATATACATACATAATCGTTAGCTTTAAATGCAATCAATGGCCCCACAGCTACATGCTTAAACTCTTTTTTGCCTCTCCTTCTTCCTCAAATATTATATTGTTTTCTCTTTTTTTTGCTGTTTCTTTTGGCTTCATTCCCTCTCCCCATGTCTTAGATTTAGTCTTTCCTTCCATTTTTCAAGATTTGAGCATTTACCCTGTTCTGGGTTTCTTGTTTTTTGTGTTTTCCCTCTTTTGGGTTTGGATTATGATCCATCAGGTCTCTGTTTTCTCTCTTGAAAGAAAGGCATTGGTGATGAACTGGGTATAGAAGATTTGAGCAATTTCCCCGTTCTGAGTTTCTTGTTTCTTGTGTTCTTTTTTTTTTTTTTTTTGGTTTTCCCTCTTTTGGGTTTCGATTATGATCCATCAGCTCTTTGTTTTCTCTCTTGAAAGAAGGGTATTGGTGATGAACTGGGTTTTATAGATTGAGAGGTTTGAGTAGATAGAGGCTATGATGGTTGGAACTCCAACTAATGGTAGGGCTCGCTTGGCCTTCTCAGTGGTTAATGGTGGACAGGAACTTTGTCTTACAAGTACTCCGACTAGCATTGCGGGCTCCGATTGCGGTAGCATTGAGTTCACTAAAGAAGATGTTGAGGCTTTGTTGAATGAGAAGCTTAAAAGGAAGGACAGGTTTAATCTTAAGGTCAGTCCCTCCTTTTCAGCAGTTAAGGAAAAATGTGACAACATGGTGGAATACATTAAAAAGCTTAAACTCTGCATCAAATGGTTCCAAGAGCTTGAATATAGCTACTTATTAGAGCAGAAGAAACTACAAGATGAGTTGGAATCTTCTGAGATCAAGTGCAGTGAAATGGAAATGATAGTGAAGAAGAAAGAGGAAGAATTGAATTCTATCATTACGGAACTCAGAAAGAACAATGCTTTTTTGCGAGAGAAATTCACAAAAGAAGAATCAGATAAGTTGGCTGCAGTAGAATCTCTCACCAAGGAGAAAGAGGCTAGGTTGATTATGGAAAGGTCACAGGCTTCAATTTCTGAGGAGCTTGCAAGGGCTCAACGTGAGCTCTCGAGTGCAAATCAAAAGATATCGTCTCTTAATGAGATGTACAAGCGGTTACAGGATTACATCACTAGTTTACAGCAATATAATGGCAAACTTCATACAGAGCTTTCGACCGCTGAGGATGACCTTAAACGCGTAGAGAAAGAAAAAGCTGCCATGGTGGAGGACCTCAGCATGATCAAGGGCGAACTTGCTCTGTCTAAAGCATCTCAAGACGAGGCAGTAAAGCAGAAGGATGCTATGGTGAACGAAGTTATGTGTTTAAGAAGAGAAATACAACAGGTTAGAGATGATCGAGATCGTCAATTATCTCTGGTTCAGACTTTGTCAGATGAAGTAGAGAAGTGCAGGGAGTCTGCAGGAAAGTACTGTGAGGAGCTGGATGAAATGAAGGAAAAAACAAATGAATTAGAGGCAACATGCTCTTCACAAAGTATTGAGCTAAGGGCATTGCAAAATCATCTAGCTGCTGCAGAAAACAAGCTGCAGGTCTCTGATCTAACTGCAATGGAGACGATGCATGAATTCGAAGATCAAAAGAGACTTGTACTTGAGTTACAACAACGACTTGCAGATGCAGAAAATAAGCTAATGGAAGGAGAAAAGCTTCGTAAAAAATTGCATAATACTATCTTGGAATTAAAAGGGAATATTCGTGTATTTTGTCGAGTACGACCTCTGTTGCCTGATGAACGTTCTAGTCCTGATGGAAATTTTATTTCCTATCCGTCATCAGTGGAATCTCTTGGACGAGGAATCGATCTGGTGCAAAATGGGCAAAGACATTCTTTCACATATGACAAGGTTTTTGCACCAGAAGCAACACAGGAAGATGTCTTTGTAGAAATTTCCCAGCTCGTACAAAGTGCGCTTGATGGTTATAAGGTTTGCATATTCGCCTATGGTCAAACTGGTTCGGGAAAAACCTATACAATGATGGGTCAGCCAGGGCTCCTGGAGGAGAAGGGACTTATACCTCGATCGTTGGAACAAATATTTCAAACTAGGCAATCTCTTCAACCTCAGGGTTGGAAATATGAAATGCAGGTATCGATGTTGGAAATATACAATGAAACTATCCGTGATTTACTATCAACAAATCGATCAACTCCAGATGTGCTACGAGCAGAAAATGGTTCTCCTATAAAACCATACTCGATCAAACACGATGCAAGTGGAAATACTCAAGTTTCTGATCTTACTGTCGTGGATGTTCGTAGCGCCAGGGAGGTCTCATTTCTATTAGAGCAAGCTTCTCGTAGCAGATCCGTTGGCAAAACTCAAATGAACGAGCAATCGTCAAGAAGTCATTTTGTGTTCACTCTCAAAATATACGGTATCAACGAGAGTACTGATCAACAAGTACAAGGGATTTTGAATTTAATTGATCTTGCTGGGAGCGAGCGTCTTTCCAAGAGCGGGTCAACAGGAGATCGACTGAAAGAAACCCAAGCCATAAATAGAAGTTTATCATCTTTGAGTGATGTTATATTTGCTTTGGCAAAGAAGGAAGAGCATGTTCCATTTAGAAACTCAAAGCTTACCTATCTTCTTCAGCCGTGTCTCGGTGGAGATTCAAAGACGTTGATGTTTGTAAATATCTCTCCCGATTCCTCCTCGGCCAGTGAATCACTCTGCTCGCTTCGCTTTGCTGCCCGGGTCAATGCTTGTGAGATCGGTACTCCTCGGCGTCTAACCAATACACGACATTAAGATTTTATGCTCGAACATTGCCTATACATTGGCAAATCAACTATTTGATGATGAAATATGAGAATGATTCTGACTTAGGCTTAGTTGTGTATAGCAAAAGAGATCTGATTGTATTAATGAAAGTAAGATTTTTTGTTGTTCCC 3331 40.14 MMVGTPTNGRARLAFSVVNGGQELCLTSTPTSIAGSDCGSIEFTKEDVEALLNEKLKRKDRFNLKVSPSFSAVKEKCDNMVEYIKKLKLCIKWFQELEYSYLLEQKKLQDELESSEIKCSEMEMIVKKKEEELNSIITELRKNNAFLREKFTKEESDKLAAVESLTKEKEARLIMERSQASISEELARAQRELSSANQKISSLNEMYKRLQDYITSLQQYNGKLHTELSTAEDDLKRVEKEKAAMVEDLSMIKGELALSKASQDEAVKQKDAMVNEVMCLRREIQQVRDDRDRQLSLVQTLSDEVEKCRESAGKYCEELDEMKEKTNELEATCSSQSIELRALQNHLAAAENKLQVSDLTAMETMHEFEDQKRLVLELQQRLADAENKLMEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDERSSPDGNFISYPSSVESLGRGIDLVQNGQRHSFTYDKVFAPEATQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGQPGLLEEKGLIPRSLEQIFQTRQSLQPQGWKYEMQVSMLEIYNETIRDLLSTNRSTPDVLRAENGSPIKPYSIKHDASGNTQVSDLTVVDVRSAREVSFLLEQASRSRSVGKTQMNEQSSRSHFVFTLKIYGINESTDQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINRSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDSSSASESLCSLRFAARVNACEIGTPRRLTNTRH 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 54379961 54385161 - XM_039043703.1 Bhi09g01950 44567

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01950 762 Coils Coil 270 290 - -
Bhi09g01950 762 Gene3D Kinesin motor domain 356 751 IPR036961 -
Bhi09g01950 762 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 761 - -
Bhi09g01950 762 Coils Coil 221 248 - -
Bhi09g01950 762 CDD KISc_C_terminal 407 751 - -
Bhi09g01950 762 PRINTS Kinesin heavy chain signature 485 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi09g01950 762 PRINTS Kinesin heavy chain signature 619 636 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi09g01950 762 PRINTS Kinesin heavy chain signature 650 668 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi09g01950 762 PRINTS Kinesin heavy chain signature 699 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi09g01950 762 Coils Coil 368 402 - -
Bhi09g01950 762 ProSiteProfiles Kinesin motor domain profile. 409 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi09g01950 762 Coils Coil 112 157 - -
Bhi09g01950 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 747 IPR027417 -
Bhi09g01950 762 PANTHER KINESIN-LIKE PROTEIN 6 761 - -
Bhi09g01950 762 Coils Coil 179 213 - -
Bhi09g01950 762 Pfam Kinesin motor domain 415 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi09g01950 762 SMART kinesin_4 407 757 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi09g01950 762 Coils Coil 305 360 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01950 K10405 KIFC1; kinesin family member C1 - csv:101215636 1382.08
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01747 Bhi-Chr8:50359433 Bhi09g01950 Bhi-Chr9:54379961 0 dispersed
Bhi09g01950 Bhi-Chr9:54379961 Bhi01g03084 Bhi-Chr1:77191914 2.43E-94 dispersed
Bhi09g01949 Bhi-Chr9:54379961 Bhi09g01950 Bhi-Chr9:54379961 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g417 Blo03g00584 . Bda07g00337 . . . . . . . Cma01g01154 Cma09g00922 . Car09g00838 . Cpe06g00742 Cpe02g00747 Bhi09g01950 . . . . . . . . . . . . . Cone6ag0089 Cone9ag0105 . . Lsi04g01248 . . . . . . . Bpe11g00523 . . Bma14g00358 . Cmo01g01207 Cmo09g00919 . . . Car16g00566 . . . . . . . . . Cla05g01542 Cam05g1650 Cec05g1655 Cco05g1694 Clacu05g1643 Cmu05g1538 Cre05g1648 . . . Cme04g00801
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006975 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 0 1 1 34