Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g01975 TCTTTCGGAATGAAGAGATAAAAGGGAAAAGGAAGAAGAAGAGAGGGAGAAGAAAAAATCAGCGGCTGAAAAATCAAGAGGGTTACAACAACAACAACAACAACAAGAGTGAATCTAAATCTGAGATTTTCGAAGAAGAAATGAAGAAGTGCGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGTGAGTCGGATCAGGCGAACCTGTGTTGGGACTGCGATGAGAAGGTTCACTGTGCAAATTTTCTTGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGTATGTCAGTCGCCGACTCCATGGGCGGCCTCTGGTCGGAAACTTACGCCGACGGTTTCTGTGTGCGAGGGATGTGTTGAAGTCCATGGTGGTAAATGCGAGCGAGGTGTATATCAAGAGCGCCGTAGAGATAACGAGGAGGAAGTTGATGAGGGTGATGGTTTTGTCGATGGTGAAGGTTTTGATAGTTATGAGGGAGGTGATAGTGAGGAAGACGATGATGGGGATGATGATGAGGATGAGGACGAGGAAGACGAAGAGGAAGAAGAGGATGAGGACGGGGAAAACCAGGTGGTGCCCTGGTCTTATGCATCTTCTTCGTCGCTACCACCGCCTCCGGCAGCCACTTCTAGTAGCGAGGGCGAGATTTCAGCCGCCGCTGGTGTCGCATCGAAGCGGATGAGAGAATACGGCGTCGATCTCGATTCCGAGGATGAAATCGAGTGTTCTTCTGCACCACAGGGTACGCGGCCATTTTTCAATGACGAAGCGACTTCCTCGAGTTCCCTTAGGCCACTGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCACATCCAATCCAGATGATGAAGCTTGTAAAGCCAAGATAAAATCCACGGCTGTCGTTAGATCTATCCAGAGACTCCAGAACCGTCTTCCCACCAACATTAACGATGCTTCCAAAATGATCTTTGGAATATGCAAAATGAGCAGAGATCAAAATCGTTGATTCTTCACTAACCACACAATGGAAGGTAGCTAGGGTTCATAAATTTTTTTCCCCCATTTTGGGGTTTCATTTTTCTCACTAATTGTCTGTCGTGATCAATTAATTCGAGGATTATACCTGTTTTCTCAACTGTGTACAACCTAGAATTTCCCCATCTATTTTCCATTAGATAATCTTGTCATCATTTGTGAAGCCTGTCATGTGTAGCCAGATATTAATTTACCCAACTACATTCTATTAACAGATTTCTCTGTACACTTC 1256 45.78 MKKCELCGQQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWAASGRKLTPTVSVCEGCVEVHGGKCERGVYQERRRDNEEEVDEGDGFVDGEGFDSYEGGDSEEDDDGDDDEDEDEEDEEEEEDEDGENQVVPWSYASSSSLPPPPAATSSSEGEISAAAGVASKRMREYGVDLDSEDEIECSSAPQGTRPFFNDEATSSSSLRPLKQARVTGPTQSATSNPDDEACKAKIKSTAVVRSIQRLQNRLPTNINDASKMIFGICKMSRDQNR 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 55135582 55137161 + XM_039043535.1 Bhi09g01975 44592

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g01975 284 MobiDBLite consensus disorder prediction 97 143 - -
Bhi09g01975 284 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Bhi09g01975 284 MobiDBLite consensus disorder prediction 87 240 - -
Bhi09g01975 284 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Bhi09g01975 284 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 244 - -
Bhi09g01975 284 MobiDBLite consensus disorder prediction 146 171 - -
Bhi09g01975 284 SMART bboxneu5 1 45 IPR000315 GO:0008270
Bhi09g01975 284 CDD Bbox1_BBX-like 3 45 - -
Bhi09g01975 284 MobiDBLite consensus disorder prediction 201 237 - -
Bhi09g01975 284 PANTHER OS08G0178800 PROTEIN 1 244 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g01975 - - - bhj:120086748 464.151
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01975 Bhi-Chr9:55135582 Bhi05g01505 Bhi-Chr5:51442402 3.36E-10 dispersed
Bhi08g01898 Bhi-Chr8:54370487 Bhi09g01975 Bhi-Chr9:55135582 7.41E-30 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g337 . . . . . . . . Cmo16g00871 . . . . . Sed07g2635 . . Bhi09g01975 Tan01g4472 Cmetu04g2261 . Hepe01g1339 Mch11g0247 . . . . . . . . . . . . . . . Cme06g02317 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000776 4 2 3 3 3 3 3 3 3 3 3 3 4 3 2 4 3 6 4 3 3 3 2 2 2 3 2 3 3 2 90
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1924 PF00643 zf-B_box 5.40E-06 No_clan Bhi TR