Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02108 CAATCTCTCTCTCTCTCTCTCTCTCTCTTCTTTTCCTTTTTCTCTCTCACAGTCCTTCCTAATACTCAGCTTTCTGTACTGTTTTCGTGTTCTCTTAGCCTTTCTCTGCTTTTTCATTTCTTTACTATTATTTTTCTCCCTTTTCTTTTGACACCCTTTAAGTTGGTTCCTCAAAACAGTTTAAAGCTGCAAACAAATGGCCTTATACGGATGTGAGCGCAGGATAACAGCATGCACACTCTTCCCAGTTTCAAGAAGAGAGAGGATTAGAGATTCTGAAAGGGAAAATCCTCTTTCCAAACGGATTACTCGAGAGTTTAATCCAAACCCAATATGTGAATAGTTAGGATCATACAGTAGGGTTTGTATTTTGTAAGTTGTGGTAACTGTGTTCATCGAAAGGTCGGTGTCCATTGATTCAACATAAAAAAAACAAGCAGACCCAGTTGATAATATGGGTCATTCGATGCTTCGATTCGCGTGCTTTTGATGCAAACAGATGCGTTCCATTGGTGCCAAACCAATCGCCAAGAAGAAGCCCCACCTATGAGATTTTGCAGACTACCATTTCCAGTTTTTGTTCCTTGGTCTTGGATTCTGATGGCGTTTTTGCTTTTTTGACTGATGGATTCTCTTGTTTTCTTCTTCTTTGAGAGAAGGGCACGTCATGGGCTCAGTGGAAGACAAGCTCAAGACATCAGGGGGTTTGATTAATAACGCCCCACAGACTAACCTTCTCGACGAGATGAAGTTGTTGAAAGAAATGCAAGATCAAACAGGGGCCCGGAAGGCTATAAACTCCGAGCTATGGCACGCTTGTGCAGGTCCGCTTGTTTCCTTGCCCCATGTGGGTAGTCTTGTCTATTACTTTCCTCAGGGACATAGTGAACAGGTGGCAGTTTCTACCAAGACAACAGCAACCTCACAGATTCCAAATTATCCTAATCTTCCCTCTCAGTTGATGTGCCAAGTTCAAAATGTTACCTTACATGCCGATAAAGATTCAGATGAAATCTATGCTCAAATGAGTCTTCAACCGGTGAACTCTGAAAAAGATGTCTTCCTAGTTCCAGACTTTGGACTAAGGCCGAGCAAACACCCAAATGAGTTCTTCTGCAAATCTTTGACTGCCAGTGACACCAGCACACATGGTGGGTTCTCAGTGCCACGCAGGGCTGCTGAAAAACTCTTTCCTCCATTGGATTACACAATGCAACCGCCAACTCAGGAGCTCGTTGTTAGAGACTTGCATGACAATACCTGGACTTTTCGCCACATTTATCGCGGGCAGCCGAAGCGACACCTTCTCACTACTGGTTGGAGTCTATTCGTTGGGGCAAAGAGGCTTAGAGCAGGAGATTCTGTCCTTTTTATAAGGGATGAAAAGTCCCAGTTGCTTATTGGAGTGAGGCGTGCTAACCGGCAACAAACAACATTGCCATCATCGGTTCTATCTGCTGATAGTATGCATATTGGGGTTCTTGCTGCTGCGGCTCATGCTGCTGCTAATCGAAGTCCATTCACAATCTTCTACAACCCCAGGGCATGTCCTTCAGAATTTGTTATCCCTTTAGCCAAGTATCGCAAATGTGTATACGGAACTCAGCTTTCTGCAGGCATGAGGTTCGGGATGATGTTTGAAACAGAAGAGTCCGGTAAACGCCGATATATGGGTACGATTGTTGGAATTAGCGATTTAGATCCACTCAGGTGGCCAGGTTCCAAGTGGCGAAATCTTCAGGTAGAGTGGGATGAGCCAGGATGCTGTGATAAGCAGAACCGGGTTAGTTCATGGGAAATAGAAACTCCAGAAAGTCTATTCATTTTTCCGTCTCTGACTTCAGGTCTTAAACGTCCATTACACGGTGGATTTTTGGCAGGAGAAACTGATTGGGGAAGTCTGGTGAAGAGACCAATGCTTCGTGTTCCTGAAAATATACGTGGGGATCTTTCATATGCGCCAACTTTATGCCCCGAACCACTGATGAAGATGCTACTGAGGCCTCAGATGGTTAACCTTCACGGAACCACCTTACAGCAGGATTCGGTCAACAATTTAGTTAAGATACAGGACATGAAGGACATGCAGCCAGTAACCAATCCCAAAATACAGCAGCTTATACCGCCAGAAACTGCATCTCCCGGGAATCAAAATCATCATCATCCAGCACCTACACAATCTGATCCCATAAACCCAAATTCATCACCCAAAGCGAATCTACCCGGAAAAGTTCACACTTCGTCGGCCATTGAAAGTGAAACTCCATCTGGAGCTGATGTAGACAAGGCAAAATACGAACGCGATCTTTCGACCAGTCAGTCCAATCCATTGCCCTCAGTTGGAGATTGTGGGGAGGAAAAACTCGCTGGTAACGAAGTGAATTTGCAAACGCTTGTAAACCAGCTTTCATTTGTGAACCAGAATCAGATCCCCATGCAGTTGCAATCCGTATCATGGCCCTTGCAGCCTCAGCTTGATTCACTAATCCAACACCCACAACCAATTGACATGCCTCAGCCTGAATTTACGAATTCAAATGGTTTGATTTCATCCTTGGATGGTGATGGATGTTTGATTAACCCATCCTGTCTGCCTCTTCCTGGAGTAATGAGATCACCAGGGAATCTTTCCATGTTGGGATTACAAGATTGCTCAACAGTCTTTCCTGAGGTTCTTAATTTTCCCTTACCCACAACAGGCCAAGACATGTGGGATCCTCTTAATAATATAAGGTTCTCATCTCAAACCAATCAACTCGTCTCATTCTCTCATCCAAACACATCTAACCTCAACTGTATGGCTAATGCAAATATTATGAGAGATGTTTCAGATGAAAGCAACAACCAAAGTGGGATATACAGTTGTTCTAACCTTGAAATCAGTAACGGTGGAAGTGCTTTGGTTGATCATGCTGTTTCAAGTACTATTCTTGATGATTATTGCACATTGAAAGAAGCTGACTTCCCACATCCTTCAGATTGCTTGGCTGGGAACTTCAGTTCGAGCCAAGATGTTCAGTCTCAGATTACCTCTGCTAGTCTGGGAGATTCTCAGGCTTTCTCCAGGCAAGAGTACCATGATAATTCAGGTGGTACATCCTCATGCAATGTGGATTTTGATGAGGGCAGTCTTTTGCAGAATGGTTCATGGAAGCAAGTGGTACCGCCCTTGAGAACTTACACGAAGGTCCAGAAGGCGGGATCTGTTGGGAGGTCTATTGATGTCACTAGTTTTAAGAACTACGACGAACTGTGCTCTGCTATCGAATGTATGTTTGGACTTGAAGGATTGCTTAATGACCCAAGAGGCTCAGGATGGAAACTGGTTTATGTTGATTATGAGAACGACGTCCTGCTTATTGGTGATGATCCCTGGGAGGAATTTGTTAGCTGCGTACGGTGTATCAGAATCTTGTCACCTTCAGAAGTTCAGCAAATGAGCGAAGAGGGAATGAAGCTTCTCAACAGTGCTATGATGCAAGGCATCAATTGCTCCATGTCAGAAGGTGGCCGAGCTTAAGACTCGGTTTCCTTAAACTAATCATTGAAGGTCGATTCTTCTGCTATGTTAGTCGGGAATCAAGTTTATTATATTACTAACACAAGCTCAAAGAAGGCCGACTGGTAGCATGAAGCTTTCGCCGTAATGCAAGTGATTGTTTATTGCCTATTTTTATCAGCAAGGGACATTTATTTGCCAAGAGCTCTAGTTGAAGTAGATTCAGTTTTTATGCAAAATTGAACTCTTTCTGAACTCATTAGAACCAAAAAGAAAAAAGAAGAAAAAAAGCTCTGGCATTTGCAGAATGCCAAGACTTTTAGTCTTCAACAAGTTGACGCTTTGCTGCACTTTCTGCAAACCCTGGCCTGTTAAGATGATACCCAAGAACTATTCATCTGGGTATGCGAGGTTCGCGATGGGGAGCCATATCTTTGTTGCCTGTCTTTCATTTTGTCCATTATCTAGAGATTTTATAGTACGATAATATATCTAAGGGTTTTTATGCTCA 4010 43.47 MGSVEDKLKTSGGLINNAPQTNLLDEMKLLKEMQDQTGARKAINSELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKTTATSQIPNYPNLPSQLMCQVQNVTLHADKDSDEIYAQMSLQPVNSEKDVFLVPDFGLRPSKHPNEFFCKSLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGAKRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIETPESLFIFPSLTSGLKRPLHGGFLAGETDWGSLVKRPMLRVPENIRGDLSYAPTLCPEPLMKMLLRPQMVNLHGTTLQQDSVNNLVKIQDMKDMQPVTNPKIQQLIPPETASPGNQNHHHPAPTQSDPINPNSSPKANLPGKVHTSSAIESETPSGADVDKAKYERDLSTSQSNPLPSVGDCGEEKLAGNEVNLQTLVNQLSFVNQNQIPMQLQSVSWPLQPQLDSLIQHPQPIDMPQPEFTNSNGLISSLDGDGCLINPSCLPLPGVMRSPGNLSMLGLQDCSTVFPEVLNFPLPTTGQDMWDPLNNIRFSSQTNQLVSFSHPNTSNLNCMANANIMRDVSDESNNQSGIYSCSNLEISNGGSALVDHAVSSTILDDYCTLKEADFPHPSDCLAGNFSSSQDVQSQITSASLGDSQAFSRQEYHDNSGGTSSCNVDFDEGSLLQNGSWKQVVPPLRTYTKVQKAGSVGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYENDVLLIGDDPWEEFVSCVRCIRILSPSEVQQMSEEGMKLLNSAMMQGINCSMSEGGRA 950
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 59941699 59947601 + XM_039042571.1 Bhi09g02108 44725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02108 950 SMART B3_2 149 251 IPR003340 GO:0003677
Bhi09g02108 950 CDD B3_DNA 148 249 IPR003340 GO:0003677
Bhi09g02108 950 Pfam AUX/IAA family 837 923 IPR033389 -
Bhi09g02108 950 MobiDBLite consensus disorder prediction 483 532 - -
Bhi09g02108 950 Pfam B3 DNA binding domain 149 250 IPR003340 GO:0003677
Bhi09g02108 950 Gene3D - 833 925 - -
Bhi09g02108 950 Gene3D - 147 250 IPR015300 -
Bhi09g02108 950 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 30 940 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi09g02108 950 ProSiteProfiles B3 DNA-binding domain profile. 149 251 IPR003340 GO:0003677
Bhi09g02108 950 ProSiteProfiles PB1 domain profile. 836 920 IPR000270 GO:0005515
Bhi09g02108 950 Pfam Auxin response factor 275 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi09g02108 950 MobiDBLite consensus disorder prediction 483 538 - -
Bhi09g02108 950 Gene3D - 313 385 - -
Bhi09g02108 950 PANTHER AUXIN RESPONSE FACTOR 5 30 940 - -
Bhi09g02108 950 SUPERFAMILY DNA-binding pseudobarrel domain 136 278 IPR015300 -
Bhi09g02108 950 SUPERFAMILY CAD & PB1 domains 838 915 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02108 Bhi-Chr9:59941699 Bhi02g00618 Bhi-Chr2:12034365 6.38E-17 dispersed
Bhi09g02107 Bhi-Chr9:59941699 Bhi09g02108 Bhi-Chr9:59941699 0 tandem
Bhi09g02108 Bhi-Chr9:59941699 Bhi09g02109 Bhi-Chr9:59941702 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1935 PF02309 AUX_IAA 9.90E-10 CL0072 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02108 K14486 - csv:101216825 1839.7