Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02137 AAAAGTCAAAATCTCCATGGGTCTAGAGATATCTCAATGGAAGTGGGTCTTATTTTGATGAGCTATCAATCTCATCTCCAACCATTCAAAACTAAAATTTCTACCCACCACGGCACCGTACATCACAATCAATCCAATTTATTAATCCTAAAAAATCTCTCCTCTCAGTCTCAACCTTATGCTTTCTTATCCTTCTCACAATCGCAGTATTTTGCAGTGGCTAGTCTACAGAGAATGGAAGATGAGGTGGTGGTGAAGATTGGGATTCAAGGGTGCGAAGAGGTCGCCCGTCGTTGGGATGACGGAGCTCATTCCACCGTCAGACAGATTGTGATTAATCATGAAAAGTGTATCTACTCGGTGAACATCGAGTATGACAACAATGGGGAATCAATTTGGAAGCCCAAGCATGGGGGAAACAAGGGTTCTACTTCCAAGGTTGTTTTAGAATATCCAAACGAGTACCTGATCTCAATCCATGGCTACTACAGCGACATAGGGAAGATAATGGAGAAGAGAGCTGCAACTCCAACCACAGTGATTCGATCGCTAACTCTGGAAAGTAATACAAAAACTTACGGACCATTTGGGATGGAAGAAGGAACCAAATTTTCATTCCCAATCATGGAGGCAAAGATCGTTGGATTCCATGGCAGTTCTGGTTGGTTTCTCGATGCAATTGGGATCTACGTACAACCAATCTCTCAGTCGCTGCAAGCTCAACATAAATCTGAAGTTGAAGTTGAAACTGAGATTGAGCAATTTAGTTTGGGAGAATATGGTGGTGAAGGTGGGGAACCATGGAGTGAGTGTTTTCAAGCAATCAAACAGTTGGTGATTCATAATGATGAACATTGGATTATTTCTATCCAAATGGAATATTTGGATGAGAATGGAAACTTTGTTTGGTCTCACAAGCATGGTGGAGAGGGTGGTTCTGCATCCCAGGTTATTCTTGAATTTCCAAATGAGAATCTAGTTTCAGTTCATGGCCACTATAAGTGTGAACTAGGTACCATCATGATCCGATCCTTGACTTTTGAAACCAATAAAACTAATTATGGACCATTTGGGAATGAAGATGGAACCAAGTTTTCCTTCCCAACTATTGGGTTGAAGATTGTTGGCATCCATGGAAGATCCTCAACTTCACATCTAAATGCCATTGGACTTCTTGTGAAATTAATTCAACATTATTAGGACCTATGCATATGCTGCTAAATCATCCCAGTGCTTAATGTTTTCCCTACTTCAAATTCAAATTATGGCTAAATTTGACCATTTTAATATAGTTCAACGAGTTAAAGTATATATATTCAATTAAGGAGATTGAGGATTTGAATGTCCTTAATTTACTAGTTAAATTTAAAAAGAAAGAAAATAATGGTTGTATTCA 1396 39.04 MEVGLILMSYQSHLQPFKTKISTHHGTVHHNQSNLLILKNLSSQSQPYAFLSFSQSQYFAVASLQRMEDEVVVKIGIQGCEEVARRWDDGAHSTVRQIVINHEKCIYSVNIEYDNNGESIWKPKHGGNKGSTSKVVLEYPNEYLISIHGYYSDIGKIMEKRAATPTTVIRSLTLESNTKTYGPFGMEEGTKFSFPIMEAKIVGFHGSSGWFLDAIGIYVQPISQSLQAQHKSEVEVETEIEQFSLGEYGGEGGEPWSECFQAIKQLVIHNDEHWIISIQMEYLDENGNFVWSHKHGGEGGSASQVILEFPNENLVSVHGHYKCELGTIMIRSLTFETNKTNYGPFGNEDGTKFSFPTIGLKIVGIHGRSSTSHLNAIGLLVKLIQHY 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 60470675 60472969 + XM_039042723.1 Bhi09g02137 44754

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02137 387 SUPERFAMILY Mannose-binding lectins 71 221 IPR036404 -
Bhi09g02137 387 Gene3D - 229 382 IPR036404 -
Bhi09g02137 387 Gene3D - 60 219 IPR036404 -
Bhi09g02137 387 ProSiteProfiles Jacalin-type lectin domain profile. 242 383 IPR001229 -
Bhi09g02137 387 SUPERFAMILY Mannose-binding lectins 244 381 IPR036404 -
Bhi09g02137 387 CDD Jacalin 263 378 IPR033734 GO:0030246
Bhi09g02137 387 CDD Jacalin 87 220 IPR033734 GO:0030246
Bhi09g02137 387 Pfam Jacalin-like lectin domain 260 381 IPR001229 -
Bhi09g02137 387 Pfam Jacalin-like lectin domain 85 221 IPR001229 -
Bhi09g02137 387 PANTHER JACALIN-RELATED LECTIN 3 74 271 - -
Bhi09g02137 387 PANTHER JACALIN-RELATED LECTIN 3 243 385 - -
Bhi09g02137 387 SMART Jacalin_2 84 221 IPR001229 -
Bhi09g02137 387 SMART Jacalin_2 253 383 IPR001229 -
Bhi09g02137 387 PANTHER JACALIN-RELATED LECTIN 3 74 271 - -
Bhi09g02137 387 PANTHER JACALIN-RELATED LECTIN 3 243 385 - -
Bhi09g02137 387 ProSiteProfiles Jacalin-type lectin domain profile. 72 221 IPR001229 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02137 - - - bhj:120086194 793.882
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02137 Bhi-Chr9:60470675 Bhi09g02139 Bhi-Chr9:60470675 1.32E-30 dispersed
Bhi09g02135 Bhi-Chr9:60464640 Bhi09g02137 Bhi-Chr9:60470675 6.88E-23 proximal
Bhi09g02137 Bhi-Chr9:60470675 Bhi09g02138 Bhi-Chr9:60470675 1.27E-30 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1012 Blo01g01579 . Bda01g00513 . . . . Bma01g02342 Cmo05g00275 Cmo12g00391 . . . Car12g00417 . . Cpe07g00395 . . . . . . . Cla08g01457 . . . . . . . Cone7ag1852 . . . . . Cme03g01921 . . . . . . . . Sed01g2548 . . Cma12g00440 Cma05g00270 . . Cpe11g00223 . Bhi09g02137 Tan01g4934 Cmetu04g1048 . . Mch11g0183 . . . . . . . . Lsi08g01363 Csa02g02090 Chy03g01425 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001431 0 9 1 0 0 2 0 2 3 3 0 3 1 3 3 0 3 0 0 3 2 2 2 3 4 5 3 6 9 0 72