Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02198 CCACCGATTCGTCATCCTCAACTAATAGACTTCCTTCACATCTAGCCACGTCTCTCTCTCTCTCACTCTTTCCATTTATATATATATTCATTATATTTCCCGCCCATCATTATAATATTATCATCAAATTCATTTTTTGGATATGAGATTATAATGGATGGAAAGCCCAGAAACACGATCACCGCCAACAGCGTTGCTCAAGCCAGCTCTCGCAAGGGCTGCATGAGAGGCAAAGGCGGCCCAGACAACGCCTCTTGCACTTTCAAAGGTGTCCGCCAGCGTACTTGGGGCAAATGGGTTGCTGAAATTCGCGAGCCCAATCGCGGTGCTCGTCTTTGGCTTGGCACCTTCGACACCGCCCATGAAGCCGCTGTAGCTTACGACGCTGCTGCTCGTAAACTCTACGGCTCCGAAGCTAAGCTCAATCTCCCTCAAACTACTCCTCCTCCTCATGATCAGCTGTCTCAGTTGGAACACGGCGGTCAGCCTTCTCCAACCGCTACAACAACCATGAAATCGTTGTCGTCTTCGGTGGAACGAATTGGAGAGCTGTGGGGAAGTGAGAACGTGAATTTTGATGAGTCAATATGGAGAGAGGCTGTGATGTCTTTGGATTTTCCTATTATTCAAGATGATCAAGGGATTTTCTTTGATGGGGTCAGCAATTGGGACACTTTGCAGTGGTGCATGTGATCTTTGATATATGATTTCGTAGATACGTAGAGAATTATAGTCTGTATATGTTTATATATAGCTTGCTTTTTATATACATAAAATATATATATTTACACATACATGCTGCATGTGTGTGTGTGTGTATAAAAAATTAAA 831 43.92 MDGKPRNTITANSVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTAHEAAVAYDAAARKLYGSEAKLNLPQTTPPPHDQLSQLEHGGQPSPTATTTMKSLSSSVERIGELWGSENVNFDESIWREAVMSLDFPIIQDDQGIFFDGVSNWDTLQWCM 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 61802218 61803048 + XM_039043702.1 Bhi09g02198 44815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02198 179 MobiDBLite consensus disorder prediction 1 19 - -
Bhi09g02198 179 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Bhi09g02198 179 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 13 125 - -
Bhi09g02198 179 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 114 173 - -
Bhi09g02198 179 MobiDBLite consensus disorder prediction 1 30 - -
Bhi09g02198 179 CDD AP2 35 95 IPR001471 GO:0003700|GO:0006355
Bhi09g02198 179 Pfam AP2 domain 36 85 IPR001471 GO:0003700|GO:0006355
Bhi09g02198 179 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Bhi09g02198 179 Gene3D AP2/ERF domain 36 94 IPR036955 GO:0003700|GO:0006355
Bhi09g02198 179 MobiDBLite consensus disorder prediction 90 120 - -
Bhi09g02198 179 SUPERFAMILY DNA-binding domain 36 94 IPR016177 GO:0003677
Bhi09g02198 179 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Bhi09g02198 179 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Bhi09g02198 179 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 114 173 - -
Bhi09g02198 179 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 13 125 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02198 Bhi-Chr9:61802218 Bhi11g02691 Bhi-Chr11:72201535 1.71E-32 dispersed
Bhi04g00212 Bhi-Chr4:5156137 Bhi09g02198 Bhi-Chr9:61802218 4.03E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1939 PF00847 AP2 2.50E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02198 - - csv:101204876 283.878