Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02200 CTACCCTCTTTCTTTCCTCTTTTTCTTTCACTTTTGCCCTAAAGAAAAAAAGAATGACAAATTTCACCAAAAAACCCTAGAATTTGTTCTTTGGGGAGTGCATTTATTTGTGATATATATATGGCCGAATCGGGGAAGATAAACAATATTAAGTCATAGAAATCATGACGGAGCTATTCTATTTAGATCGGAAGCCAGTGGAGGATCCAGAAAACCAAAGAGGAAGATCAGAACAACAATTGTTTTTATACAATAGATCAACCAATAACCAAGAGATCTACTCCAAAGGCTTGCAGATACGGCCACACTATGCTCACAACCATCATCCTCCACAACAAAATGTCGAGAATTACATTTCCTTTGGAGTCGAGCCTAGTCCAACGACAACGAACTTCATGATCAACGCCTCTGATCATGACTTTGTTTCAAGATCAGGGTTTACGATGATGAGACATGGAGGAGGATCGGGAGGAGGTGGCGGTGGGATCAATTGTCAAGATTGTGGCAATCAAGCTAAGAAAGATTGTTCCCACTTGAGATGTAGAACTTGTTGTAAGAGCCGAGGGTTTCATTGTCAAACTCATGTCAAAAGTACTTGGGTTCCAGCTGCCAAACGTAGGGAACGCGAACAACAACGTCACCAACAATTGAGAGCAGATCAGTTGTCGGCTCAGACTATTCACAAAAGTCATAGAGAAAATCAACCATCTCTTACTCCTACTATCACTTCAGGGTTAGAACTTGGAAATTTTCAAAGTGAATTCAATTCGTCAGCTGTTTTTCGGTGCGTCAAAGTTAGTGCGATTGACAATGTAGAAGAAGAATTAGCATATCAAACGACTGTGAACATTGGTGGGCATATGTTTAAAGGAATTCTTTACGACCAAGGTCCAGAAAGTAGTCAAAATTTAAGCAACGGCGGTGACAGAGAAGACAGCGGGGAAGGGCTGGATTTGGTGATCGGAGCATCGTCCAATGGTGGTGGGAGAGTTAACCAATCCGCCCCATTTGTGGAGTCTTCGTTGTATCCCATCCAAATCAACACATTCAACAACGGTACTCAATTTTTCACTTCGTCTAGAACATAG 1088 41.54 MTELFYLDRKPVEDPENQRGRSEQQLFLYNRSTNNQEIYSKGLQIRPHYAHNHHPPQQNVENYISFGVEPSPTTTNFMINASDHDFVSRSGFTMMRHGGGSGGGGGGINCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPAAKRREREQQRHQQLRADQLSAQTIHKSHRENQPSLTPTITSGLELGNFQSEFNSSAVFRCVKVSAIDNVEEELAYQTTVNIGGHMFKGILYDQGPESSQNLSNGGDREDSGEGLDLVIGASSNGGGRVNQSAPFVESSLYPIQINTFNNGTQFFTSSRT 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 61976432 61977696 - XM_039043896.1 Bhi09g02200 44817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02200 307 MobiDBLite consensus disorder prediction 241 270 - -
Bhi09g02200 307 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 109 151 IPR006510 -
Bhi09g02200 307 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 303 - -
Bhi09g02200 307 Pfam Domain of unknown function (DUF702) 107 244 - -
Bhi09g02200 307 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 198 243 IPR006511 -
Bhi09g02200 307 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 303 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02200 Bhi-Chr9:61976432 Bhi10g00260 Bhi-Chr10:5854482 2.02E-27 dispersed
Bhi05g00786 Bhi-Chr5:25410702 Bhi09g02200 Bhi-Chr9:61976432 1.97E-134 transposed
Bhi03g00899 Bhi-Chr3:16955402 Bhi09g02200 Bhi-Chr9:61976432 2.21E-65 wgd
Bhi04g00221 Bhi-Chr4:5399389 Bhi09g02200 Bhi-Chr9:61976432 6.38E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1940 PF05142 DUF702 5.10E-59 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02200 - - csv:101218246 456.447