Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02224 GCTCTCTACGTGAAAATTTGATTTAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAGAAAACAGCAAAAGTAAAGAGAAACCAAAACGAACGAACGAACAAAGCCCTCAGAAGAGAAGAAACAATGAAGCAGAGTATATCTGAGGCAGTATCTTCATCATCCACCACGGGGTTATCGGAGCACTCGCAATCATCGTCGTCGTCCTCATCGTCGACGACGCCGTTGGAGAAGCTTCAATCGATATCGAATGCAGCGGCGGCGGAGGATTTGGCCGTCGGGTCAAGGGATGGCGGCGGGGCGCAAGAAACGGTGACTGTCGATCGACGAGGGGACTTCTCCGCGGTGTGTAGATGGACAGTACAAAATTTTCCAAGAATCAAGGCTAGGGCTCTATGGAGCAAGTACTTCGAGGTTGGAGGTTACGATTGCCGTCTGTTGATATATCCAAAAGGGGATTCCCAAGCACTGCCGGGCTATATTTCAATCTACCTTCAAATCGTGGACCCGCGCGGCACATCCTCTTCCAAATGGGATTGCTTTGCGAGCTACCGTCTGGCCATCGTCAACGTTCTTGATGATTCCAAGACCGTTCATCGGGATTCATGGCACCGTTTCTCGAGCAAGAAGAAGTCACACGGATGGTGCGATTTTACTCCCTCTTCCACCGTGTTTGATTCTAAGCTCGGTTATCTGTTTAATAACGAGTCTATTTTGATCACTGCTGATATTCTAATTCTCAATGAGTCTGTAAACTTTACCCGGGATAACAATGAGCCAGCCTCATCTATGATGATGGCATCCTCGGTTGTTGCTTGCCCTGCGCCCGAGGTGCTCAGCGGCAAGTTCACCTGGAAAGTTCATAATTTTAGTTTGTTTAAAGAGATGATAAAAACACAGAAAATAATGAGTCCCGTCTTCCCAGCTGGAGAGTGTAATTTGAGGATTAGTGTCTATCAGAGCTCAGTGAATGGGGCTGAATATTTATCAATGTGTCTAGAGAGCAAGGATACCGAAAAGACAGTAATATTACCTGATAGGAGTTGTTGGTGTTTGTTTCGGATGTCCGTGTTAAACCAGAAGCCTGCTTTGAATCACATGCATCGAGACTCATATGGGAGATTTGCAGCTGATAATAAGAGTGGGGACAATACCAGTTTGGGGTGGAATGACTATATGAAGATGTCTGATTTTGTTGGGCAAGATTCTGGTTTTTTAGTTGACGATACCGCTGTGTTTAGTACCTCCTTTCATGTTATCAAGGAGTTTAGTAATTTTTCAAAGAATGGTGGATTAATTGGAGGTAGAAATGGAAGTGGAATTAGAAAATCAGATGGTCACATGGGGAAATTCACATGGAGGATTGAGAACTTCACAAGGTTAAAGGACCTCTTGAAGAAGAGGAAGATTACAGGTCTTTGCATCAAGAGCAGGAGATTTCAGGTTGGGAACCGCGACTGTCGCCTCATTGTATATCCTCGAGGGCAGTCTCAACCACCATGTCACCTTTCAGTCTTTCTTGAAGTTACGGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTGAGTCATCGGTTGTCGGTAGTAAACCAGAAGATGGAAGAGAAATCTGTTACAAAGGAGTCTCAAAACCGGTACTCCAAAGCTGCAAAAGACTGGGGATGGCGTGAGTTTGTCACACTTACCAGCCTCTTTGATCAAGATTCCGGGTTTCTTGTTCAGGATACTGTAATATTCTCCGCAGAGGTCCTTATATTAAAGGAGACATCTGTGATGCAGGATTTTAACGATCAAGACATGGAGCCAACCGGTTCCAGCTCTCTTACAGATAAGGTGGCCAAAAAAAGTTCATTTACATGGAAGGTGGAGAACTTTTTGTCCTTCAAGGAAATAATGGAGACTCGTAAAATTTTTAGTAAATTTTTTCAAGCTGGTGGATGTGAGCTCCGTATTGGCGTCTATGAGTCCTTTGACACCATTTGCATCTATCTGGAGAGTGATCAGTCTGTTGGCAGTGATCCAGATAAAAACTTTTGGGTCAGATACAAAATGGCCGTGGTGAATCAAAAATATCCAGCAAAAACTGTGTGGAAGGAGTCTTCTATTTGTACAAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCAGACATGCTAGAGGCAGAAGCGGGGTTTCTTGTACGAGATACAGTTGTTTTCGTATGTGAAATATTGGATTGCTGCCCATGGTTTGAGTTTTCAGATCTTGAGGTTTTGGCTTCAGAAGATGATCAGGATGCTTTGACTACTGATCCGGATGAACTCATTGATTCAGAAGATAGTGAAGGAATAAGTGGTGATGAAGAAGACATTTTTAGAAACCTTCTATCCACAGCTGGGTTTCATCTAACATACGGGGATAATCCTTCACAACCACAAGTCACTTTGCGAGAAAAACTTTTAATGGATGCCGGTGCAATTGCAGGCTTTCTTACTGGACTTCGTGTTTATCTTGATGATCCCGCTAAAGTTAAGCGCTTACTTCTTCCTACTAAACTATCTGGTAGCAATGATGGGAAAAAGGTCTCAAAGACAGATGAGTCGTCCCCCAGTTTAATGAATTTGCTGATGGGAGTCAAAGTATTACAGCAGGCGATTATTGATTTACTGTTGGATATAATGGTTGAGTGTTGTCAACCTTCGGAAGGGGGCTCTGGAGATCATTTGGAAGCAAATTCAAAGCCTTCTGTTCCTAGCAATGGAGCTACTACCGTTCCACCGGAAGGTGAAATTGAAAATGCAGCAACAGAGGCTGCAGATTTTCCTCCATTTCAGAGATTGGATTCCGTCGAGGAAAGTAGTAGTGCTCCTGCTGTACAAAGCTCTGACATGAATAGAACTGATAGGCAGGGTAAGTCTCTACCTGAAGAGCTAATACATCCACCTGAAACATCTGCTGGGGTTTCAGAGAATGTCTTCCTCCGTACAAAGACCAAGTGGCCTGAGCAATCTGAGGAGCTTTTAGGCTTGATTGTAAATTCATTGAGAGCCCTAGATGGGGCTGTCCCTCGAGGATGTCCTGAGCCAAGAAGACGGCCTCAGTCTGCACAAAAGATTGCACTTGTGCTGGATAAAGCTCCCAGACATCTACACTCTGACCTGGTTGCATTAGTACCTAAATTGGTCGAGCATTCAGAACATCCGTTGGCTGCTGGTGTGCTTTTAGAACGGCTTCAACAGCCTGGTGCTGAGCCAGCACTGCGGATACCTGTTTTTGGTGCTCTTAGTCAATTGGAGTGTGGCACTGAAGTTTGGGAACAAGTTCTATTTAAAGCTGTTGAGTTTTTAGCAGATTCAAATGATGAGCCTCTTGCTGCAACTATAGATTTTGTTTTCAAAGCTGGAGCTCAGTGCCAACATCTCTCTGAAGCGGTGAGATCCGTACGCTGTAGGCTGAAGAATTTGGGCATGGAGGTTTCCCCATGTGTTCTTGATTTATTAAGTAAAACTGTAAATAGCTGGGGTGATGTTTCTGATATTATACTCAGAGATATTGATTGTGATGATGATGCTGATGATTTCTGCTCAAAAATATCACATGAGCTTTTCTTATTTGGTGAACCTGGCCCTGCTTCAGAAAGTTTACAGCCGTTGGATGAACAGGATTTACATGCTGCTCGTCATTTTTCTGATATCTATATCTTGATTGAGATGTTATCGATACCATGTCTTGCCGTTGAAGCATCACAGACATTTGAGAGAGCTGTAGCTCGTGGTGCCATCACGGTTAAATCTATTGCTGTGGTGTTGGAAAAACGTCTTGCTCAAAAAGCAAATAGCAACACTAGATTTGTAACTGAAAGCTTCCAGCCTGGAGATTCTGTAATAGATGGAGAAACTAGTGAGCAGCTGAGAGTCCAGCGGGATGATTTTACTTCTATTGTTGGTCTTGCCGAAACATTAGCACTCTCCAGAGACCCTCGTGTTAGAGGATTTGTGAAAATGCTGTACCCATTATTGTTTAAGTGGTATGCAAGTGAGTCGTATCGGGCCAGGATGCTAAAAAGATTGGTTGATCGTGTAACCAGCAGTGCAGACAATAACCGTGAAGTAGATATGGATTTGGAAATTCTGGTTATGTTGATGGGTGATGAACAAGAAATAATCAGACCTGTGCTAAATATGATGAGAGATGTTGCGGAACTAGCAAATGTTGACCGTGCTGCTCTCTGGCACCAGTTATGTGCTACTGAAGATGAAATCATCCGTATCCGTGAAGAAAGCAAATTAGAAATTTCAAATATGATGAAAGAAAAAACTGTTCTGTCACAAAAATTGAGTGAATCTGATGCTATGAACAATCGCCTTAAGAATGAGATGAAGGCTGAGATGGAGCGATTTTCTCGCGAGAGAAGGGAACTTTCTGAACAAATACATGACATTGAGAGTCAGCTTGAGTGGCTTCGCTCTGAGCGAGATGATGAGATTGTGAAGTTAACAGCAGAGAAGAAAGTTCTCCATGATCGTCTCCATGATGCTGAGACTCAAATTGCACAATTGAAATCCCGAAAACGTGATGAGATGAAGAAAGTAGTGAAGGAAAAAAATGCACTTGCTGAGAGATTGAAGAGTGCTGAAGCTGCTCGAAAAAGATTTGATGAACAACTGAAACGGTATGCAAATGAGAATATGACGAGGGAAGAAATCCGGCAGTCACTAGAAGATGAAGTTCGTAGGCTTACACAAACAGTTGGACAGACTGAAGGAGAAAAGAGGGAGAAGGAAGAGCAGATTGCTCGATGTGAAGCATATATTGATGGGATGGAAGCAAAATTGCAGGCCTGCCAGCAATATATTCATTCACTTGAAGCATCGCTACAAGAGGAAATGTCAAGACATGCCCCTCTTTATGGTGCTGGTTTGGAAGCTCTGTCAATGAAGGAGCTAGAGACGTTATCCCGAATTCATGAAGAAGGATTAAGGCAAATTCATACTCTTCAACAGCGCAAAGGGAGTCCGGCTGGCAGTCCTCTTGTGAGCCCTCATTCCCTCTCTCACAGTCATGGGTTGTACACTTCTGCACCGCCCCCGATGGCAGTCGGGATGCCTCCTTCACTCATCCCCAATGGCTCAGGGATCCACAGCAATGGCCATGTGAATGGTGGTGGAGTTGGACCATGGTTCAACCATGCTTGATTGAACACTTGGTCACAGCCACAATGGTAACATAGTCAATTTTTTTTCCTCCCTAATAGAGCTAAGATGGATAACATCACGAGAGAAGGATGTTACTTTTTTTTGAGTTGGCATTTTTACTGGTCTAGCGGTTCTGGGAGCGGAATGCAAGATTGAATGAAATAGCAAAATGGTCTATGAATATAGGGTTCTCATAGTTGAGTTTGTGAGGATTCTAGTTGATTCCGTTCTTAGTATCGAGCAGTTACAAATGCCATTCATATGCATTTCTCTTTTCAGGTCATAAAAGTTCATTATAGGCAAATAGGCCATCCCAGAAAATCCCTTGTCATTTCTTTTTACCTTCTTGGTTCTCTGATTCAATTTCCTTCATGGCTTTTTACTGACTGAGGTAACCGACATCGACTAAATACACGTCTTAATTAGCTGAATCAAGAAAAGTTTGTCTTGGTTAATAATCAAGCATATTGTTCATGTGTTGCCTCGGTATGAATTTTGGATGAAAATGGACAATCTGGTTTGCTTGATCTTTTATCATATCATGCACGAATAAGTTTAAATAGGAGTCGAATAGGCAGATTAGTCCGAGTTGAGAAGGAAAAAACCGTATGAACTAAGCAGAAGCATGTAGCTGAGGGACAGAAAAGAGAAGGGTAGATTTTCTTTTCCCTTCTAACTTCCAAATAAAGAATCCTCATTATTTGAATCTCATCTAATGTATCTGAGCATTCTAGTAACAGTTTCTTTTTCCAAATAATTTGATGGGTGTTATATTGCTCAAAGTGA 5970 42.48 MKQSISEAVSSSSTTGLSEHSQSSSSSSSSTTPLEKLQSISNAAAAEDLAVGSRDGGGAQETVTVDRRGDFSAVCRWTVQNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIVDPRGTSSSKWDCFASYRLAIVNVLDDSKTVHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNESILITADILILNESVNFTRDNNEPASSMMMASSVVACPAPEVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGAEYLSMCLESKDTEKTVILPDRSCWCLFRMSVLNQKPALNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFVGQDSGFLVDDTAVFSTSFHVIKEFSNFSKNGGLIGGRNGSGIRKSDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQVGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSVMQDFNDQDMEPTGSSSLTDKVAKKSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQSVGSDPDKNFWVRYKMAVVNQKYPAKTVWKESSICTKTWNNSVLQFMKVSDMLEAEAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSTAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGSNDGKKVSKTDESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGGSGDHLEANSKPSVPSNGATTVPPEGEIENAATEAADFPPFQRLDSVEESSSAPAVQSSDMNRTDRQGKSLPEELIHPPETSAGVSENVFLRTKTKWPEQSEELLGLIVNSLRALDGAVPRGCPEPRRRPQSAQKIALVLDKAPRHLHSDLVALVPKLVEHSEHPLAAGVLLERLQQPGAEPALRIPVFGALSQLECGTEVWEQVLFKAVEFLADSNDEPLAATIDFVFKAGAQCQHLSEAVRSVRCRLKNLGMEVSPCVLDLLSKTVNSWGDVSDIILRDIDCDDDADDFCSKISHELFLFGEPGPASESLQPLDEQDLHAARHFSDIYILIEMLSIPCLAVEASQTFERAVARGAITVKSIAVVLEKRLAQKANSNTRFVTESFQPGDSVIDGETSEQLRVQRDDFTSIVGLAETLALSRDPRVRGFVKMLYPLLFKWYASESYRARMLKRLVDRVTSSADNNREVDMDLEILVMLMGDEQEIIRPVLNMMRDVAELANVDRAALWHQLCATEDEIIRIREESKLEISNMMKEKTVLSQKLSESDAMNNRLKNEMKAEMERFSRERRELSEQIHDIESQLEWLRSERDDEIVKLTAEKKVLHDRLHDAETQIAQLKSRKRDEMKKVVKEKNALAERLKSAEAARKRFDEQLKRYANENMTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQIARCEAYIDGMEAKLQACQQYIHSLEASLQEEMSRHAPLYGAGLEALSMKELETLSRIHEEGLRQIHTLQQRKGSPAGSPLVSPHSLSHSHGLYTSAPPPMAVGMPPSLIPNGSGIHSNGHVNGGGVGPWFNHA 1685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 62674122 62685871 - XM_039043721.1 Bhi09g02224 44841

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02224 1685 MobiDBLite consensus disorder prediction 856 882 - -
Bhi09g02224 1685 ProSiteProfiles MATH/TRAF domain profile. 72 202 IPR002083 GO:0005515
Bhi09g02224 1685 SMART math_3 411 523 IPR002083 GO:0005515
Bhi09g02224 1685 SMART math_3 243 356 IPR002083 GO:0005515
Bhi09g02224 1685 SMART math_3 74 182 IPR002083 GO:0005515
Bhi09g02224 1685 SMART math_3 579 679 IPR002083 GO:0005515
Bhi09g02224 1685 Coils Coil 1450 1565 - -
Bhi09g02224 1685 MobiDBLite consensus disorder prediction 902 922 - -
Bhi09g02224 1685 Coils Coil 1400 1445 - -
Bhi09g02224 1685 PANTHER TRAF-LIKE FAMILY PROTEIN 30 1684 - -
Bhi09g02224 1685 PANTHER TRAF-LIKE FAMILY PROTEIN 30 1684 - -
Bhi09g02224 1685 CDD MATH 407 542 IPR002083 GO:0005515
Bhi09g02224 1685 CDD MATH 239 371 IPR002083 GO:0005515
Bhi09g02224 1685 MobiDBLite consensus disorder prediction 1665 1685 - -
Bhi09g02224 1685 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 564 700 IPR008974 GO:0005515
Bhi09g02224 1685 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 234 382 IPR008974 GO:0005515
Bhi09g02224 1685 MobiDBLite consensus disorder prediction 1 36 - -
Bhi09g02224 1685 SUPERFAMILY TRAF domain-like 574 699 - -
Bhi09g02224 1685 CDD MATH 76 202 IPR002083 GO:0005515
Bhi09g02224 1685 MobiDBLite consensus disorder prediction 1620 1650 - -
Bhi09g02224 1685 Pfam MATH domain 437 544 IPR002083 GO:0005515
Bhi09g02224 1685 Pfam MATH domain 587 694 IPR002083 GO:0005515
Bhi09g02224 1685 Pfam MATH domain 80 204 IPR002083 GO:0005515
Bhi09g02224 1685 ProSiteProfiles MATH/TRAF domain profile. 238 375 IPR002083 GO:0005515
Bhi09g02224 1685 SUPERFAMILY TRAF domain-like 236 382 - -
Bhi09g02224 1685 ProSiteProfiles MATH/TRAF domain profile. 574 698 IPR002083 GO:0005515
Bhi09g02224 1685 MobiDBLite consensus disorder prediction 1620 1644 - -
Bhi09g02224 1685 SUPERFAMILY TRAF domain-like 73 210 - -
Bhi09g02224 1685 Gene3D - 1441 1634 - -
Bhi09g02224 1685 ProSiteProfiles MATH/TRAF domain profile. 406 542 IPR002083 GO:0005515
Bhi09g02224 1685 MobiDBLite consensus disorder prediction 902 938 - -
Bhi09g02224 1685 SUPERFAMILY TRAF domain-like 407 548 - -
Bhi09g02224 1685 CDD MATH 576 698 IPR002083 GO:0005515
Bhi09g02224 1685 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 71 217 IPR008974 GO:0005515
Bhi09g02224 1685 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 404 563 IPR008974 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02224 - - - csv:101209841 3093.14
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02224 Bhi-Chr9:62674122 Bhi10g00427 Bhi-Chr10:9724963 1.38E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g501 . . . Bda03g00075 . . Bma04g00072 . . . Cma01g01513 . Car09g00391 . . . Cpe06g00327 . . . . . . . Cla05g01725 Cam05g1838 Cec05g1852 Cco05g1909 Clacu05g1825 Cmu05g1709 Cre05g1840 . . Cone17ag1011 . Lsi04g02117 Csa03g04321 Chy04g00379 . . . . . . Bpe04g00061 . . Sed05g1711 Cmo01g01566 Cmo09g00453 Cma09g00443 . . . . Cpe02g00443 Bhi09g02224 Tan01g3626 Cmetu04g2170 . Hepe01g2009 Mch11g0545 . . . . . . . . . . . Cme04g00422
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007058 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 1 2 37