Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02238 TTTCCAAATTCATAAAGTGGGGTGTCATCACTTTGGATTGTAGCTCAAAGAAAATTAAAAGAAAAAAAACCCAAATTCAGAAATTGACAATTTATGATCCCAACACCAAGTTTTACATTATAAAATATTGAAGTTTTGAATCTTTTTTGGGATCTCTCAAGAGATGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAAGAAGAAAAATAAAGAACGAAAGCGAAGCAAAAGTCATTAAATATTATCACTGACGAACGCCATATGAACACTTTGCTCATCTTTTCTTTGGTGGGTAAAAAGAAAATGGCGGTATCTCTAAGAACATAGAGACAGGACAAGCAATTTCTACCCAACAATCCTTATTTTTCTCTTCTTTTCAGACCAACATTGAAGAACAACCAGCGACAGCCCCTCTTTTTCCTCGTACAACCTCGAGCTTTGGTCCTTTTCCCACCATTTTCAGAGGGAAATGCAATGTTGAAGAAAGGTTCTGTTGTGGTTTGGTCTACAAATTCAAGTGACAAAGGGGTTTCTTCCTTGGAGTTGCAAGACTCGGGAAATTTGGTTTTACGAGCGAACGACAGCGATAATGGAATAGTTTGGCAGAGTTTTAGTCATCCAACTGATACTCTTTTATCAGGGCAGGATTTTGTTGAAGGAATGAGACTTGTGAGTGATCTTAGTAATAATAACATTAGCTATTACCTTGAAATGAAGTCTGGTGATATGACACTCTTAGCAGGTTTTCAATCCCCACAGCCTTACTGGTCTATGGCTAAGGAGAATCGTAAAACCGTTAATAAAAATGGCGGGGCAGTCTTCTCGGCGACTCTTGATGTGAACTCTTGGAAGTTTTATGATCGAAGCAAAGTCTTGCTCTGGCAATTCATCTTCTCGAATATAGCCAATGAAAATGCAACTTGGATAGCAGTTTTAGGAGATGATGGTTTTGTGTCTTTTTATAATCTTCAAGTTTCTGGTGCGGCTTCAACTACTAAGATACCTGAAGACTCTTGTAGCACACCGGAACCGTGTGGCCCATATTTTATATGTTATAGTGGGAACCGATGCCAATGTCCTTCAGTTCTTAGCACCAAACCGAATTGTCAACATGGGATTGTCTCTCCTTGTGATCAATCAAATGGAAGTATTGAGCTTGTAAATGCAGGGACTGGGGTAAAATATTTTGCACTTGGATTCCTACCATCCACTTCGACTGATTTAAATGGTTGCAAAACCTCTTGCATGAGCAACTGTTCTTGCCGTGCATTGTTCTTTGAAAGCCGAACGGGGAACTGCTTCTTGTTGGATGACGTTGGTAGCTTTCAAAACTCCAATGAGGACTCTGACTTTGTTTCATACATCAAGGTCTTGAAGAATGGAGGCAGCGGTGACAACAACGGAGGGAGTAAAAATGGTGGAATGAACTCTCATATTGTTGCGATCATCATTGTTTTTACCGTGTTCGTCATTTGTGGTCTAGTTTATTTGGCATTTTGTTACTACAGGAAAAAGAGAAAACTACCGGGAACTCTTCAAGAGACTTCCGAGGATGATAACTTCTTGGATGGTTTAACAGGGGCGCCTATTCGTTATAGCTACGACGATCTTCAAACTGCAACCAATAATTTCTCTATGAAACTTGGTCAAGGAGGATTTGGCTCAGTATATCAAGGAGTTCTACCTGATGGAACTCGGGTTGCTGTGAAGAAATTGGAAGCAATTGGTCAAGGGAAGAAGGAGTTTCGAGCTGAAGTGAGCATAATTGGTAGTATCCATCATGTTCACTTGGTCAGGCTCAAGGGCTATTGTGCTGAAGGATCACACAAGCTTCTTGCTTATGAATACATGGGAAATGGTTCTTTGGACAAATGGATATTTAGGAAGAATAAAGAAGATTTTTTGTTAGATTGGAATACAAGATTCAATATTGCGTTAGGAACAGCTAAGGGGCTAGCTTACCTCCATGAAGATTGTGATGTAAAGATTATTCACTGTGACATCAAACCCGAAAATGTGCTTCTGGACGACAAATTCCTTGCAAAAGTATCAGACTTTGGCCTTGCAAAGCTAATGACACATGAGCAGAGCCATGTTTTTACGACACTAAGAGGAACTCGAGGGTATCTTGCTCCAGAGTGGATCACAAACTACGCCATTTCAGAGAAGAGTGACGTGTATAGCTACGGTATGGTATTGCTCGAGATAATTGGGGGAAGAAAAAACTTTGACTCAACAGAAACTTCGGAAAAATGCCACTTCCCATCTTATGCTTTTAAAATGATGGAAGAAGGAAGACTTGAAAACATCCTTGACTCAAATCTGGTCATAAAAAATGGTGATGAGAGAGTTTTTACAGCCATTAAAGTTGCACTGTGGTGCATACAAGAAGATATGCATCTCAGGCCACCAATGACTAGAGTAGTCCAAATGCTCGAAGGCCTTTGTGCCGTTCCTCCGCCTCCAACTTCCTCCCCTCTCGGTTCTCGCCTATTTTCAAGTTTCTTCAAATCAATCAGTGAGGGAGGAACCTCTTCTGGGCCATCGGACTGCAACAGCGATGCGTATCTTTCAGCTGTGAAGCTCTCCGGGCCAAGATGATGACAACTCTTGGAAAGATTTCGGCATATAATTCATTCACAGATGAGTTCTCTTATACTTCCTACACAGCATCATATTCTTGTAAATTAGTTTCTGTTCTCAACAACTTTTGAAATACTAGAAAAGTGAATAGTTTTTGCTGTTTGTTATGTATATTTAGATTGCTGTTTTTTTTTTTTTTTTTAATTATAGAAAATTGGTTATG 2805 39.64 MLKKGSVVVWSTNSSDKGVSSLELQDSGNLVLRANDSDNGIVWQSFSHPTDTLLSGQDFVEGMRLVSDLSNNNISYYLEMKSGDMTLLAGFQSPQPYWSMAKENRKTVNKNGGAVFSATLDVNSWKFYDRSKVLLWQFIFSNIANENATWIAVLGDDGFVSFYNLQVSGAASTTKIPEDSCSTPEPCGPYFICYSGNRCQCPSVLSTKPNCQHGIVSPCDQSNGSIELVNAGTGVKYFALGFLPSTSTDLNGCKTSCMSNCSCRALFFESRTGNCFLLDDVGSFQNSNEDSDFVSYIKVLKNGGSGDNNGGSKNGGMNSHIVAIIIVFTVFVICGLVYLAFCYYRKKRKLPGTLQETSEDDNFLDGLTGAPIRYSYDDLQTATNNFSMKLGQGGFGSVYQGVLPDGTRVAVKKLEAIGQGKKEFRAEVSIIGSIHHVHLVRLKGYCAEGSHKLLAYEYMGNGSLDKWIFRKNKEDFLLDWNTRFNIALGTAKGLAYLHEDCDVKIIHCDIKPENVLLDDKFLAKVSDFGLAKLMTHEQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDSTETSEKCHFPSYAFKMMEEGRLENILDSNLVIKNGDERVFTAIKVALWCIQEDMHLRPPMTRVVQMLEGLCAVPPPPTSSPLGSRLFSSFFKSISEGGTSSGPSDCNSDAYLSAVKLSGPR 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 62967435 62970895 + XM_039044051.1 Bhi09g02238 44855

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02238 708 Gene3D Phosphorylase Kinase; domain 1 354 458 - -
Bhi09g02238 708 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 708 - -
Bhi09g02238 708 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 708 - -
Bhi09g02238 708 SMART serkin_6 384 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g02238 708 CDD STKc_IRAK 390 657 - -
Bhi09g02238 708 ProSitePatterns Protein kinases ATP-binding region signature. 390 413 IPR017441 GO:0005524
Bhi09g02238 708 SUPERFAMILY alpha-D-mannose-specific plant lectins 4 100 IPR036426 -
Bhi09g02238 708 ProSiteProfiles Bulb-type lectin domain profile. 1 79 IPR001480 -
Bhi09g02238 708 CDD PAN_AP_plant 219 299 - -
Bhi09g02238 708 Pfam D-mannose binding lectin 3 59 IPR001480 -
Bhi09g02238 708 ProSiteProfiles Protein kinase domain profile. 384 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g02238 708 PIRSF SRK 1 704 IPR024171 GO:0004674
Bhi09g02238 708 SUPERFAMILY Protein kinase-like (PK-like) 368 655 IPR011009 -
Bhi09g02238 708 Pfam Protein kinase domain 387 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g02238 708 Gene3D Hepatocyte Growth Factor 230 316 - -
Bhi09g02238 708 Gene3D - 1 65 IPR036426 -
Bhi09g02238 708 ProSiteProfiles PAN/Apple domain profile. 219 301 IPR003609 -
Bhi09g02238 708 Gene3D Transferase(Phosphotransferase) domain 1 459 660 - -
Bhi09g02238 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02238 - - - csv:101207644 1322.76
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi04g00947 Bhi09g02238 CCT
Bhi04g00947 Bhi09g02238 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00947 Bhi-Chr4:24104491 Bhi09g02238 Bhi-Chr9:62967435 0 dispersed
Bhi09g02238 Bhi-Chr9:62967435 Bhi09g02646 Bhi-Chr9:71344754 6.53E-125 dispersed
Bhi09g02355 Bhi-Chr9:64394999 Bhi09g02238 Bhi-Chr9:62967435 3.93E-84 dispersed
Bhi09g02237 Bhi-Chr9:62967434 Bhi09g02238 Bhi-Chr9:62967435 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g485 Blo01g01390 . Bda01g00747 . Bpe02g01248 Bpe02g00561 . . . Cmo12g00289 . . Car09g00401 Car12g00321 . Cpe07g00298 Cpe06g00340 Bhi04g00947 . . . . . Lcy13g1792 Cla05g01737 . . . . . . Cone4ag1783 Cone7ag1698 . . Lsi04g02129 Csa03g04335 Chy04g00367 Cme03g01614 . Blo18g00024 Bda01g01002 Bda13g01262 Bpe14g00581 . Bma01g01276 Bma02g00024 . . Cmo09g00467 Cma09g00458 Cma12g00340 . . . . Bhi09g02238 . . . . Mch11g0555 . Cla08g01336 . . . . . . Lsi08g01207 . Chy03g01118 Cme04g00409
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001479 3 3 3 4 3 2 2 2 2 2 2 2 2 2 1 2 2 7 2 2 2 2 2 2 1 2 1 2 2 2 68
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88143 PF00069 Pkinase 5.60E-50 CL0016 Bhi PK