Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02243 TCACTGCAATCATAAATGGCGCTTTATGATCTTAAACCTCCAAATTTCTTCTTTCCTTTTTCCCCATTCACACAAAGCTCTCTCTGATGTTAAAATTTAATGAAACTTTCTTTTTGGGTAGCAGACAAATTTGAAGTTCCATTCCATTTCGATCCGCCATTAGAGAAGGAATAAGAAAAAGAAAAGTTGCAGAATGGGAGAGAGAAATTGCAATGTGGAAGCCTCTCATTTAATTTTGGTTGTTAAGAAGCTGCGTCTTTGTGTGGATCTTTCATGGTTGAGCAGAGTTATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCATCCATTGCTGAAGAGAAGGGTGTGGCTGGGGACATTCGACACAGCAGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATTTTGATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCCTCCTTGACATGCCTGCGGCTTGACAGTGACAACGCTCACATTGGCGTATGGCAGAAGCGTGCAGGCACTCGAGCCACCTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGACGTACCATCCCCGTCCCCGTCGCCTGAATCGACGAGCCAGGAAGCTGATGGCGATGGCCACCGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTGCTCAATTGGAACTGCCCTCTTCCTTCAACTTAAAGCTAAGTACAAGATCTCAACACAAAACTCAACCCCAAAAATTTAAAAACAAAAATAAAAAATAAAACCCATAAGATCAATACAAAGAGGCTTAATTAATCTGTGTGTTTTGACTGTATATGTGTGTATGTGTATATATAGATATATATGTTATGCTTTACTGTTTCTGTTACTATCAGCTTATGTAAAGCTGTTTATGGGACTTGGGAAGCTCAAAATCTGTATAAAGGGGGAGCTTTTGCATATAGATAAATTGCTGTTTTATGTCAGCTCGAGTCAAAATATCACAGGGGATTGTCATCTTTTATAAGTTACATATATATATTTTTAAAATATTTATATATATAAATAGAAAGGAAAAAAAATTTGCAGATGATGAGCAAAGGAGTA 1252 40.73 MGERNCNVEASHLILVVKKLRLCVDLSWLSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKDVPSPSPSPESTSQEADGDGHRNGIDEEDRIAMQMIEELLNWNCPLPST 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63152725 63154781 + XM_039044002.1 Bhi09g02243 44860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02243 222 MobiDBLite consensus disorder prediction 91 116 - -
Bhi09g02243 222 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Bhi09g02243 222 CDD AP2 38 97 IPR001471 GO:0003700|GO:0006355
Bhi09g02243 222 SUPERFAMILY DNA-binding domain 38 97 IPR016177 GO:0003677
Bhi09g02243 222 MobiDBLite consensus disorder prediction 171 199 - -
Bhi09g02243 222 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Bhi09g02243 222 Gene3D AP2/ERF domain 37 97 IPR036955 GO:0003700|GO:0006355
Bhi09g02243 222 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Bhi09g02243 222 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Bhi09g02243 222 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 33 221 - -
Bhi09g02243 222 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Bhi09g02243 222 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 33 221 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02243 Bhi-Chr9:63152725 Bhi09g02247 Bhi-Chr9:63152733 9.72E-146 dispersed
Bhi09g02243 Bhi-Chr9:63152725 Bhi09g02244 Bhi-Chr9:63152729 2.14E-136 tandem
Bhi02g00994 Bhi-Chr2:22244594 Bhi09g02243 Bhi-Chr9:63152725 2.20E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1943 PF00847 AP2 5.00E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02243 - - bhj:120087118 380.563