Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02245 AATCATAAATGGCGCTTTATGATCTTAAACCTCCAAATTTCTTCTTTCCTTTTTCCCCATTCACACAAAGCTCTCTCTGATGTTAAAATTTAATGAAACTTTCTTTTTGGGTAGCAGACAAATTTGAAGTTCCATTCCATTTCGATCCGCCATTAGAGAAGGAATAAGAAAAAGAAAAGTTGCAGAATGGGAGAGAGAAATTGCAATGTGGAAGCCTCTCATTTAATTTTGGTTGTTAAGAAGCTGCGTCTTTGTGTGGATCTTTCATGGTTGAGCAGGTGAAAGTTTTAATGGCCAACCCCATTTAAAAAAAGTACTCTTCTTCCTTCTTCTTCCTCTTCTTCTTCCTCCTCATATTCTTCTTCTCTGTTGAAAGACTTTCCAATTTCCCACCGACAATTCTATATAAATGGTTGAAGTTATTACTCTCTAGTTATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCATCCATTGCTGAAGAGAAGGGTGTGGCTGGGGACATTCGACACAGCAGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATTTTGATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCCTCCTTGACATGCCTGCGGCTTGACAGTGACAACGCTCACATTGGCGTATGGCAGAAGCGTGCAGGCACTCGAGCCACCTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGACGTACCATCCCCGTCCCCGTCGCCTGAATCGACGAGCCAGGAAGCTGATGGCGATGGCCACCGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTGCTCAATTGGAACTGCCCTCTTCCTTCAACTTAAAGCTAAGTACAAGATCTCAACACAAAACTCAACCCCAAAAATTTAAAAACAAAAATAAAAAATAAAACCCATAAGATCAATACAAAGAGGCTTAATTAATCTGTGTGTTTTGACTGTATATGTGTGTATGTGTATATATAGATATATATGTTATGCTTTACTGTTTCTGTTACTATCAGCTTATGTAAAGCTGTTTATGGGACTTGGGAAGCTCAAAATCTGTATAAAGGGGGAGCTTTTGCATATAGATAAATTGCTGTTTTATGTCAGCTCGAGTCAAAATATCACAGGGGATTGTCATCTTTTATAAGTTACATATATATATTTTTAAAATATTTATATATATAAATAGAAAGGAAAAAAAATTTGCAGATGATGAGCAAAGGAGTA 1398 40.06 MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKDVPSPSPSPESTSQEADGDGHRNGIDEEDRIAMQMIEELLNWNCPLPST 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63152732 63154781 + XM_039044005.1 Bhi09g02245 44862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02245 190 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Bhi09g02245 190 MobiDBLite consensus disorder prediction 139 169 - -
Bhi09g02245 190 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Bhi09g02245 190 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Bhi09g02245 190 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 189 - -
Bhi09g02245 190 MobiDBLite consensus disorder prediction 59 84 - -
Bhi09g02245 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 1 189 - -
Bhi09g02245 190 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Bhi09g02245 190 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Bhi09g02245 190 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Bhi09g02245 190 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bhi09g02245 190 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02245 Bhi-Chr9:63152732 Bhi09g02247 Bhi-Chr9:63152733 1.39E-143 dispersed
Bhi09g02244 Bhi-Chr9:63152729 Bhi09g02245 Bhi-Chr9:63152732 1.21E-143 tandem
Bhi09g02245 Bhi-Chr9:63152732 Bhi09g02246 Bhi-Chr9:63152732 2.19E-143 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1945 PF00847 AP2 3.80E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02245 - - bhj:120087118 374.015