Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02274 GATAACAACTGTTTGTTTGCCTTTCCGGTTGATCGTAAAGCTTAAAGTAAAAGAATCGCCACTGAGTCTTCACATTCACTCCCGCCATTCAATGAGGCGCGCTGCTACTCCTCCTCCTCCGCTCCATCAACTGTCCGTCGCCGTCGCCACAGCTACCGCTACCGCTACCGCCACGACCGCCACCAATACATCCGCTGTCATGTCTTCTCGACCTCCCTACCGAGGTGGCCGGTACGGAGGCCACCGAGGCTTCTCGTCGGAACGGCCATACTCTGGTGGTAGAGGTCAATTCGTCACCGGTGATTCTCATTTTCAGTCTGTTCGGGAGTCCAACCTAGGGTTCCAGCGAGGAGAGAGAGGAGGCTTTGCGAACAATGCGGGACGTTATAGTGCAACTCAAAACCCTAGACCTCCGTCTTTTGGTGGAAATCATCAATTCCGACAGGCTCCGCCTTCCACTCAGAGGCACCAGTATCGGGGACCTCATCCTCATACCCACTGTCAGCAGCCACCGTCGTTCAATCAAAATCAAGGTGTTCATATGCCGCAGCAAATTCGACCTCGGCCTCCAAAGCCGTTAGATTATCGTCATTGGGATTATGCAAAGACACCACCTCCATCTACTTGCGAGCGGTTTTCAATTCTTTCATACAACATATTAGCTGATTACCTTGCCATGGATCACAAGCAAAAGCTCTACCGTCATATTCCCGGTTACATGTTGGATTGGGAGTGGAGGAAAAATCATATTTTATTTGAGCTTGGATTATGGTCTACTGACATAATGTGCTTTCAGGAGGTTGATAGATTCCACGACTTAGAGGAAGCACTGAAAGTTCGTGGGTTCAGTGGAATTTGGAAGATGCGTACTGGAACTCCAGTTGACGGCTGTGCAATCTTTTGGCACATGTCAAGGTTCAAGCTTCTGCATGAGGAGTCTATTGAGTTCAATAAGCTTGGACTACGAGACAATGTTGCTCAGATATGTGTTCTTGAGAGTCATCGGGATGATGGTGACAATTCAGTTACTCCACCGATTAGCACATCAAATCACAATAAAGTTGTTATATGTAATATACATGTCCTCTATAACCCTAAAAGAGGAGAAATCAAGCTTGGCCAGGTCAGGGTTCTCTTGGAGAAGGCTCACGCTATTTCAAAAAATTGGGACAATGCTCCAATCGTTCTCTGTGGGGATTTTAACTGTACACCAAAGAGTGCATTGTATAACTTTATTTCTGAACAGAAGCTAGATTTGTCTGGATTGGATAGAGACAAGGTATCGGGACAATCTTCTGCTGAGATTCATCAACCTTCATCATTCTGGCGTAATCCTCGGCTTCAGACTGCCAATGGCTCAGTTCCCCTCCAGTCGAGGTCAGAATCTAGCGATATTGAAAGGAAGTCGGATAGTTCTTTGTCTGACATACAGAAGCAAGATTGTTCACGTAGCTGCATGGAAAATGAGAATCTTCCATCAGTAAACCACATCTTGCCCCCTGATAGTTCTCACATTGTCTTTGATGCTCCTGATACTTCTTGTAACGATCTCCAACTTGGAATGAAGGGTACCACTCTACATTCTGAAGGGAAAAAGGAAAGTCAACGTAGTGCTTTGTTTGACCACAAAAATGGAGGGGAAACAACTTGCTGTGAGAAGACAGATAGCTTCAACGAAAATTCAATCACGTGTGCTAAAGATGAGTTTACTGTTGGTCATACCAGTAAAAAAGTTGGCGAACTAGTCTCTCCTTTAGGAACCGACCCTGAACTAGTTCATCTGAATGAAACTGAGAGACGACAGATGGAGAAAACCGATGCCTCCCATTTAATCAATAAATCTTCTACAGATGGTTATGAGGATCACAATTTTGGCAAGGAAAGCAAAGACACTGTTGATCCTCTTATCTTAGATGATGCACAGCTTTATTCTCAGACAGTTTGTTGGGATTCAAAGAACGTTTCTTCTACACCTGCTTGCAAAAATTCCATGGCCGAAACTGCCATAGACTCCTCTGATGTTGTAACTTTTGACCGCTCATTTGGCGAATTTGAGAAGGAAAGCTCCTCCGGTAGGAATATTGAAGGTGGCCCATCAACGGGTTTGCCTGGGATTGACTCAGATATGGATGAGAGACCAAAGATTTTCCCTTCAGATGAGCAGGATGTAGCTGCGTTAAATGGAAGCTTAACTGAGGATGATCAGACATTTCTCTCAGCTTTGCATGGTGTTGAAGATCCCTTTTCATCCGATATTCATCATTCTGGTATTCATCGAAACTTGGTTCCACCACCCACTGGAGTTGAAGATGATTTGTTGCCAGGATTGAATACCAAGTCTTTTGAAGTTGAAAATGTTACTCATGATCGCTCATTATGGACTCCAATGGAAATAGAAACTGCTACTGGCAATGCAGATATTACTCTAATTGAACACTCTCTAAGGCTTAGAAGCACATATACAGAAGCTGAGGACCTCTCCGGGACCAGAGACTTGAATGGGGAACCCCTGGCAACTAGTTACAATAGGTGTTTTCTGGGCACTGTCGACTACATATGGCGTTCAGAAGGTCTTCAGACGGTTAGGGTGCTTGCCCCCATAAGAAAACAAGTCATGCAGCAGTTGACTCCTGGATTTCCTACAAAGAAATGGGGCAGCGATCACATTGCCTTAGCTACTGAATTGGCATTTGTAAGGAGTCGTGAAGAGTGATACCGTGAATCTTAAGAAGCAAATGATAATAAGTGAATAAATAATTTCCCTTGTAATTGGAGTTTTTTTATTTGAGGAACCAAACTGGTTCCAATGGCACCAGCCTGCAGGTGCAGTGTGTTGAGTTAGAGGAGATAACAGAGCCTAAGATGGTGAGTTTTTTCCCTAATTATTATTATTATTATTTTATTTATAGATGTAGTTTTTCACCAA 2926 44.16 MRRAATPPPPLHQLSVAVATATATATATTATNTSAVMSSRPPYRGGRYGGHRGFSSERPYSGGRGQFVTGDSHFQSVRESNLGFQRGERGGFANNAGRYSATQNPRPPSFGGNHQFRQAPPSTQRHQYRGPHPHTHCQQPPSFNQNQGVHMPQQIRPRPPKPLDYRHWDYAKTPPPSTCERFSILSYNILADYLAMDHKQKLYRHIPGYMLDWEWRKNHILFELGLWSTDIMCFQEVDRFHDLEEALKVRGFSGIWKMRTGTPVDGCAIFWHMSRFKLLHEESIEFNKLGLRDNVAQICVLESHRDDGDNSVTPPISTSNHNKVVICNIHVLYNPKRGEIKLGQVRVLLEKAHAISKNWDNAPIVLCGDFNCTPKSALYNFISEQKLDLSGLDRDKVSGQSSAEIHQPSSFWRNPRLQTANGSVPLQSRSESSDIERKSDSSLSDIQKQDCSRSCMENENLPSVNHILPPDSSHIVFDAPDTSCNDLQLGMKGTTLHSEGKKESQRSALFDHKNGGETTCCEKTDSFNENSITCAKDEFTVGHTSKKVGELVSPLGTDPELVHLNETERRQMEKTDASHLINKSSTDGYEDHNFGKESKDTVDPLILDDAQLYSQTVCWDSKNVSSTPACKNSMAETAIDSSDVVTFDRSFGEFEKESSSGRNIEGGPSTGLPGIDSDMDERPKIFPSDEQDVAALNGSLTEDDQTFLSALHGVEDPFSSDIHHSGIHRNLVPPPTGVEDDLLPGLNTKSFEVENVTHDRSLWTPMEIETATGNADITLIEHSLRLRSTYTEAEDLSGTRDLNGEPLATSYNRCFLGTVDYIWRSEGLQTVRVLAPIRKQVMQQLTPGFPTKKWGSDHIALATELAFVRSREE 873
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63535396 63546203 - XM_039042037.1 Bhi09g02274 44891

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02274 873 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 52 868 - -
Bhi09g02274 873 Gene3D Endonuclease/exonuclease/phosphatase 739 873 IPR036691 -
Bhi09g02274 873 Gene3D Endonuclease/exonuclease/phosphatase 155 462 IPR036691 -
Bhi09g02274 873 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 52 868 - -
Bhi09g02274 873 Pfam Endonuclease/Exonuclease/phosphatase family 185 392 IPR005135 GO:0003824
Bhi09g02274 873 MobiDBLite consensus disorder prediction 27 69 - -
Bhi09g02274 873 MobiDBLite consensus disorder prediction 399 430 - -
Bhi09g02274 873 MobiDBLite consensus disorder prediction 399 447 - -
Bhi09g02274 873 SUPERFAMILY DNase I-like 170 389 IPR036691 -
Bhi09g02274 873 MobiDBLite consensus disorder prediction 655 675 - -
Bhi09g02274 873 MobiDBLite consensus disorder prediction 82 139 - -
Bhi09g02274 873 MobiDBLite consensus disorder prediction 96 125 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02274 - - - csv:101217096 1435.24
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03497 Bhi-Chr1:88513021 Bhi09g02274 Bhi-Chr9:63535396 7.59E-23 dispersed
Bhi01g03498 Bhi-Chr1:88513021 Bhi09g02274 Bhi-Chr9:63535396 4.80E-23 dispersed
Bhi09g02274 Bhi-Chr9:63535396 Bhi11g02494 Bhi-Chr11:67592581 3.57E-23 dispersed
Bhi09g02274 Bhi-Chr9:63535396 Bhi09g02275 Bhi-Chr9:63535396 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g410 . . . . . Bpe02g00578 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cpe02g00464 Bhi09g02274 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009856 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 32