Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02277 TAACGAATCACGTCGTCGTCTAGTAGCACAAGAATGAGAATCAATCAGCAACGATCACAAAGCCAAAGACGAAACCACACAAATTCCCTTCCCACATTCACCAGAAAGATCAATCAACAATGCCCGCCTCAAACATGGCGGCATCTCTAAGCTCTTGGTCCCACGCGCTCGTCAGAATCTCCCCCTACACCTTCTCTGCCGTCGGCATTGCCATAGCCATCGGCGTTTCTGTCCTCGGAGCCGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATCAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGTGATCAACAATTGATGAATGGCTACTTTTCAACCTGTACATGGAGGTTTGGAAGTGTAATTTTCTGTGAAGCTGTGGCCATATATGGTGTCATTGTGGCCATCATTCTACAAACAAAACTGGAGAGTGTTTCAGCATCTCAAATTCATGCTCCTGAGTCTCTAACAGCAGGATATTCCATTTTTTCTTCTGGGATTATTGTCGGCTTTGCCAATCTGGTTTGCGGGTTGTGTGTAGGGATCATTGGCAGCAGTTGTGCATTGTCTGATGCTCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGTTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGCTAAGGCAGTTTAATTTGCTAATTGCTTCTGAACTTGAGGATTTGTGGTTAACTTTCTTTGGAGTTAATGCCTTTTCTTTGTATATGTAAAAGCTTGGCTATGATAAACAAACCGTGTAAGAACTTGGAAAGTGCTTGGTGTCTTTTTTGGTCTCTAGGATGCCCAATGATATGGCCTTGGCATTCATGCAAATGTAAGGCAGTGGAATTTGAACTGCTGTAATATATCAATAATATCAAAAACCTTGGTGAAGGCTCCACAAATGAAGCTTTCCTTTGTAATTGAAACTCAGAGGTTTAAATCTCCATATTGGTTACATATTGGTTAA 1037 42.53 MPASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISDQQLMNGYFSTCTWRFGSVIFCEAVAIYGVIVAIILQTKLESVSASQIHAPESLTAGYSIFSSGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKAV 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63561802 63563699 - XM_039042868.1 Bhi09g02277 44894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02277 200 CDD ATP-synt_Vo_c_ATP6F_rpt2 125 189 - -
Bhi09g02277 200 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 87 197 - -
Bhi09g02277 200 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 6 69 - -
Bhi09g02277 200 Gene3D - 23 196 IPR035921 -
Bhi09g02277 200 SUPERFAMILY F1F0 ATP synthase subunit C 122 190 IPR035921 -
Bhi09g02277 200 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 6 69 - -
Bhi09g02277 200 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 87 197 - -
Bhi09g02277 200 SUPERFAMILY F1F0 ATP synthase subunit C 21 108 IPR035921 -
Bhi09g02277 200 Pfam ATP synthase subunit C 132 189 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bhi09g02277 200 Pfam ATP synthase subunit C 29 68 IPR002379 GO:0015078|GO:0033177|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02277 Bhi-Chr9:63561802 Bhi09g02279 Bhi-Chr9:63562147 8.98E-97 dispersed
Bhi09g02277 Bhi-Chr9:63561802 Bhi09g02278 Bhi-Chr9:63561802 4.01E-119 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02277 K03661 - csv:101205012 305.449