Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02278 ATCACGTCGTCGTCTAGTAGCACAAGAATGAGAATCAATCAGCAACGATCACAAAGCCAAAGACGAAACCACACAAATTCCCTTCCCACATTCACCAGAAAGATCAATCAACAATGCCCGCCTCAAACATGGCGGCATCTCTAAGCTCTTGGTCCCACGCGCTCGTCAGAATCTCCCCCTACACCTTCTCTGCCGTCGGCATTGCCATAGCCATCGGCGTTTCTGTCCTCGGAGCCGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATCAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGTGTAATTTTCTGTGAAGCTGTGGCCATATATGGTGTCATTGTGGCCATCATTCTACAAACAAAACTGGAGAGTGTTTCAGCATCTCAAATTCATGCTCCTGAGTCTCTAACAGCAGGATATTCCATTTTTTCTTCTGGGATTATTGTCGGCTTTGCCAATCTGGTTTGCGGGTTGTGTGTAGGGATCATTGGCAGCAGTTGTGCATTGTCTGATGCTCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGTTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGCTAAGGCAGTTTAATTTGCTAATTGCTTCTGAACTTGAGGATTTGTGGTTAACTTTCTTTGGAGTTAATGCCTTTTCTTTGTATATGTAAAAGCTTGGCTATGATAAACAAACCGTGTAAGAACTTGGAAAGTGCTTGGTGTCTTTTTTGGTCTCTAGGATGCCCAATGATATGGCCTTGGCATTCATGCAAATGTAAGGCAGTGGAATTTGAACTGCTGTAATATATCAATAATATCAAAAACCTTGGTGAAGGCTCCACAAATGAAGCTTTCCTTTGTAATTGAAACTCAGAGGTTTAAATCTCCATATTGGTTACATATTGGTTAA 977 42.78 MPASNMAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIHAPESLTAGYSIFSSGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKAV 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63561802 63563693 - XM_039042869.1 Bhi09g02278 44895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02278 182 SUPERFAMILY F1F0 ATP synthase subunit C 104 172 IPR035921 -
Bhi09g02278 182 CDD ATP-synt_Vo_c_ATP6F_rpt1 25 87 - -
Bhi09g02278 182 Gene3D - 23 178 IPR035921 -
Bhi09g02278 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 41 65 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bhi09g02278 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 67 91 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bhi09g02278 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 123 149 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bhi09g02278 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 150 173 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bhi09g02278 182 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 6 179 - -
Bhi09g02278 182 CDD ATP-synt_Vo_c_ATP6F_rpt2 107 171 - -
Bhi09g02278 182 SUPERFAMILY F1F0 ATP synthase subunit C 21 90 IPR035921 -
Bhi09g02278 182 Pfam ATP synthase subunit C 29 87 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bhi09g02278 182 Pfam ATP synthase subunit C 114 171 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bhi09g02278 182 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 6 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01015 Bhi-Chr4:25482264 Bhi09g02278 Bhi-Chr9:63561802 2.09E-109 dispersed
Bhi09g02278 Bhi-Chr9:63561802 Bhi09g02673 Bhi-Chr9:71752658 1.22E-21 dispersed
Bhi09g02277 Bhi-Chr9:63561802 Bhi09g02278 Bhi-Chr9:63561802 4.01E-119 tandem
Bhi09g02278 Bhi-Chr9:63561802 Bhi09g02279 Bhi-Chr9:63562147 9.27E-76 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02278 K03661 - csv:101205012 316.62