Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02350 CTTGCACCGCAAGTTCTTCATGTATGGGCCAAAAACAGTGAATGGCGGGTTCTCTCAGCGGCTCCATGAAGATGAAATTTGCAAGCGGAAGAAGCTCGGGAGATGGAGAACTCTGCGCTGCAAACAACTGAATAGACCGACTCGATCGATCTATCCAGATTTCGAAGTTTCAATTATCAGAATGCACTTTGGAAGCAGCAATTAGCGACAGGATAAGAAAGGACAAGGGGATGGATATTCTTCGGAATTTCATCCCTCTTTTTTGTCTGATCTTTTATGTTTATTTAAGGGAAAATCTCTTGAACAGCATAAGATAGAAAGAAAAAACGCCAAAGTTGAAGAAACATGGGAGGGAAAAGCTGCAGCACATGAACCAGATTTTGATCCTACAAAAATGTCTACAGGCTTTCCTCCACCAGTTTACTATGGCGACCGCAAATCTGAATCAACTACGATTTAACTGGAAAATGCACTTGTTCCTCCATCTCCACCAAAGTTTGCATCAACTGCACCAAATTTAGCACATCAACCAATGCATAATGTAATTCAAGTTTGGGAAATTGATGCACCAACAATGGAAAAGTTCATTCAAGAACTGGCAAAAGAAAAGCCAATAAGGTTCACTGCTCAGCAACTATATATTTTCACAGACAATTATTCAACACCACTTGGGGCTGGAGGATTTAGTACAGTCTACAAAGGTCAGTTCCCCAATGGGGTAAAGATTGCTGTGAAGGTTCTAAATAGAAACTCAGACAAACAGGCTGAGCAACAATTTATGGCTGAGGTAGGAACAATTGGCAAAACATACCATAGACATTTGGTTAGGCTTTATGGTTTTTGTTATGACCAATATATGGGTGCATTAGTATTTGAGTATATGGAAAATGGATCTCTGGATAAGTATTTGTTTGGAAAAAATCAAGATATTGATTGGGGGAAACTACTTGATGTAGCCATTGGGACCGCTAAAGCTCTTGCTTACTTGCACGAGGAATGCCAAGAAAGGATCATTCATTATGATATAAAGCCCGCTAACATTTTGTTGGATTCAGACTTCTCTCCCAAAGTTGCTGATTTTGGACTTGCCAAGCTTTGCAACAGGGATAACACACATATATCTCTCACTGGCTATCGAGGCACCCCCGGATACTCGGCACCGGAGTTTTTTTTGAACAATTATCCCGTAACGCACAAGTGTGATGTTTATAGCTTTGGAATGGTATTGTTCGAGATCATTGGAAGAAAGAGGAATGCTACCGTTACTCCTTCTGGGAACCTCGATTGGTTTCCACGACGCGTGTGGGATAAGTTCAAAAAAGGCGAGCTAGAAGAAATGAGTCGTGTATGTGGTATTGAAGAGAGAGATAAAGAGAGTGTGAGTAGAATGTGCAAGGTGGCTTTGTGGTGCGTTCAAGACTCCCCTGACGAGCGGCCACCAATGAGTGCAGTGGTGAAGATGCTAGAGGGAGGAGTAGAAATAATGCCGCCACCAAATCCATTTCAAATCTCGAATCCAACTCCGATAGGGAACATCAAACTGGATTTGCTACAAACGAGTATTAGTTCGGATTTTTCGACATCCAATGAAGAAATCCATTCTTCTTGGTACAAGAAAGCTACTCCAATTATGAAGAAGTATGAAATACAGATAGCTAGTTCATAACTTAGAAGTTAGTTAGGAGTTGAAAGGTTTGTCTTTAGGTTGTATAATCTTTGTACTGTGTTTGAACTTTGCAATGGAATTATAAAGACTTTGGTAATTTGTAGTTACTTTAAAGATTGTCTGAATTGTTGGAAATATG 1805 40.33 MHNVIQVWEIDAPTMEKFIQELAKEKPIRFTAQQLYIFTDNYSTPLGAGGFSTVYKGQFPNGVKIAVKVLNRNSDKQAEQQFMAEVGTIGKTYHRHLVRLYGFCYDQYMGALVFEYMENGSLDKYLFGKNQDIDWGKLLDVAIGTAKALAYLHEECQERIIHYDIKPANILLDSDFSPKVADFGLAKLCNRDNTHISLTGYRGTPGYSAPEFFLNNYPVTHKCDVYSFGMVLFEIIGRKRNATVTPSGNLDWFPRRVWDKFKKGELEEMSRVCGIEERDKESVSRMCKVALWCVQDSPDERPPMSAVVKMLEGGVEIMPPPNPFQISNPTPIGNIKLDLLQTSISSDFSTSNEEIHSSWYKKATPIMKKYEIQIASS 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 64370623 64373615 + XM_039043424.1 Bhi09g02350 44967

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02350 377 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Bhi09g02350 377 ProSiteProfiles Protein kinase domain profile. 40 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g02350 377 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Bhi09g02350 377 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g02350 377 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 356 IPR045874 GO:0004672
Bhi09g02350 377 Pfam Protein tyrosine and serine/threonine kinase 44 311 IPR001245 GO:0004672|GO:0006468
Bhi09g02350 377 Gene3D Phosphorylase Kinase; domain 1 13 116 - -
Bhi09g02350 377 PANTHER RECEPTOR SERINE/THREONINE KINASE 12 356 - -
Bhi09g02350 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Bhi09g02350 377 Gene3D Transferase(Phosphotransferase) domain 1 117 317 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02350 - - - csv:101213731 701.049
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02350 Bhi-Chr9:64370623 Bhi09g02353 Bhi-Chr9:64394508 0 dispersed
Bhi09g02349 Bhi-Chr9:64370623 Bhi09g02350 Bhi-Chr9:64370623 0 tandem
Bhi09g02350 Bhi-Chr9:64370623 Bhi09g02351 Bhi-Chr9:64370623 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g210 . . . . Bpe02g01248 . . . . . . . Car09g00450 . . . Cpe06g00388 . . . . . . . Cla05g01795 . . . . . . . . . . Lsi04g02188 Csa03g04396 Chy04g00306 . . . Bda01g01002 . . . . . . . Cmo09g00514 . . . . . . Bhi09g02350 . . . Hepe01g2080 Mch11g0619 . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000610 0 8 0 0 0 4 2 4 5 4 3 4 3 4 3 3 4 2 3 1 4 2 3 5 5 3 5 7 7 4 102
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88145 PF07714 PK_Tyr_Ser-Thr 6.10E-46 CL0016 Bhi PK