Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02373 TCATCCACTTCTTTCAGTATCTCTTTCGCTCCATGGCTGATGGTTAGTTTCTCTCTGTATCTTATCGGCAGTAACAACTACAACCGGAGAAGATGCTACGGATCACATCATTCTCCTCTCGTCATCTGGCATTAAATCCGTCCGACTCAACGAACGTATTTTCTCGTTCGCTTCCTTCTCGCACGGCCGCCGCCCGGCGTCGGAGAGACTCTCATCGGAGTCCTAATCTCAAGCGGCTGACCTCTCGTGTCGTCAGACTCACCCATCGCAAGCAGCTCCACCAGGTATTTAAGGAAATTGAGATCGCCAAGAGACGTTATGGAAAGCTGAATACAATTGTTATGAATGCGGTCTTGGAAGCTTGTGTTCATTGTGGTGATATTGATTTAGCTCTGAGGACTTTTAATGAAATGTCCAACCCAGATAATTGTGGTCTAGACAATGTCAGTTATGGCACGCTATTAAAGGGTTTGGGTGAAGCTCGCAAGATTGATGAAGCATTTCAAATTCTTGAATCTGTGGAGGAAGGTACTGCTATTGGGGGTCCAACATTGTCAGCACCACTTATTTATGGTCTTCTAAATGCTTTAATTGAAGCAGGAGACATGCGCCGTGCCAATGGTCTAATAGCACGATATGGGTTCTTACTTCGTGAAGGAGGCAATCTCTCTATATCAGTTTACAACTTATTGATGAAGGGGTACGTATGCTCAGGTGTTCCTCAAGCTGCTTTAGCCATGTACAATGAGATGCTAAATCTGGAGTTGAAACCTGATAGGCTCACATATAATACATTAATCTCTGCTTGTGTGAAGATCAACAAACTGGATGCAGCAATGCATTTCTTTGAGGAAATGAAGGAACAAGCTGATAAGTATGACCAGGAAGATATTTTTCCTGATGTTGTGACGTACACTACTTTACTTAAGGGTTTTGGGATTCTGAAAGATGTCTGTCTTGTTCACAAAATTGTGCTGGAAATGAAGTCTTCTCATGATTTGTTGATTGATCGAACAGCATACACCGCAATGATTGATGCTTTGGTTAACTGTGGCTCTATTAATGGTGCTCTTTCTTTATTTGGGGAATTATTGAAGCTTTCGGGGTGGAATTTGGACTTACGGCCAAAGCCACATCTCTATCTCACTCTCATGAGAGTTTTTTCTAGTAGAGGAGATTATAGGATGGTCAAATGTTTGCATAGACGCATGTGGCTGGACTCCTCTGGAACTATTTCTCCTGCATATTCGGAAGAAGCTGATCATCTTCTCATGGAGGCAGCTTTAAATGACAACCAGACCACAGCATATACGCCCTCAGTAGATAGAGATGGACTGTTGATTGTTATACAAGTTATTGAGCTAATACAGTGGTAGTTTATCCAATTTACTATAGTTTTTACCACAATGAGGGTCTGAGTGGCAAAGAAACAAGTATTTTCCTTTATGTATTTGGCAAGATTTTAAGTTGCAAGTTGTCAAAAGCCACCTGGAAGCAAAAATCTTGTTTACATGAATTGTTGTTTTGGTTGTTGGTGTATGTACAGTACATATTTGGTCCTAAAAAGGGCCTCCTCCATGCCATTTTTCCAAATTGATGTTTTATGTGCAACTGTAAGGAAAAGCGAGAGAATTACCGTCCATTAGTATTTTAAGGAAGCTCATACACATTTTGGGTCCATCCCTATGCTTTTCATGAGATATAAGGAAATCTACAGTACAAAATAGGGGATTTTAAAAAATAGAAAAATAAGTGAAATTATTTACACAAAATAGCAAAATTTTAATCTTCTTTGATAGAGGTTAATAGAAGTCTATCAACTGTCTATCAGTGATAGAAAATAATTTAAGTTTATCACTGATAGACGCGGATAGAAATCTACCCGTGTCTATTATTGTTTTTTTTTTTTTTGCTATTTTTGTAAATATTTTGACATTTTTTCTATTTTGTGAAAACTTCCTACAAAAATATTGCATCACCATCTTTTTAAGCATACAGTGGGATATTTGGAATGGCTCCAGTGAGAACACGTT 2033 39.1 MLRITSFSSRHLALNPSDSTNVFSRSLPSRTAAARRRRDSHRSPNLKRLTSRVVRLTHRKQLHQVFKEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALRTFNEMSNPDNCGLDNVSYGTLLKGLGEARKIDEAFQILESVEEGTAIGGPTLSAPLIYGLLNALIEAGDMRRANGLIARYGFLLREGGNLSISVYNLLMKGYVCSGVPQAALAMYNEMLNLELKPDRLTYNTLISACVKINKLDAAMHFFEEMKEQADKYDQEDIFPDVVTYTTLLKGFGILKDVCLVHKIVLEMKSSHDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTLMRVFSSRGDYRMVKCLHRRMWLDSSGTISPAYSEEADHLLMEAALNDNQTTAYTPSVDRDGLLIVIQVIELIQW 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 64714318 64723197 - XM_039042063.1 Bhi09g02373 44990

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02373 427 Pfam PPR repeat 309 335 IPR002885 -
Bhi09g02373 427 Pfam PPR repeat 196 222 IPR002885 -
Bhi09g02373 427 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 228 258 IPR002885 -
Bhi09g02373 427 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 116 146 IPR002885 -
Bhi09g02373 427 PANTHER OS09G0431600 PROTEIN 19 405 IPR044781 -
Bhi09g02373 427 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 193 227 IPR002885 -
Bhi09g02373 427 TIGRFAM PPR: pentatricopeptide repeat domain 84 108 IPR002885 -
Bhi09g02373 427 TIGRFAM PPR: pentatricopeptide repeat domain 118 142 IPR002885 -
Bhi09g02373 427 TIGRFAM PPR: pentatricopeptide repeat domain 309 339 IPR002885 -
Bhi09g02373 427 TIGRFAM PPR: pentatricopeptide repeat domain 196 228 IPR002885 -
Bhi09g02373 427 TIGRFAM PPR: pentatricopeptide repeat domain 231 258 IPR002885 -
Bhi09g02373 427 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 306 341 IPR002885 -
Bhi09g02373 427 MobiDBLite consensus disorder prediction 21 43 - -
Bhi09g02373 427 Pfam PPR repeat family 80 127 IPR002885 -
Bhi09g02373 427 Pfam PPR repeat family 227 281 IPR002885 -
Bhi09g02373 427 Gene3D Tetratricopeptide repeat domain 46 183 IPR011990 GO:0005515
Bhi09g02373 427 Gene3D Tetratricopeptide repeat domain 262 412 IPR011990 GO:0005515
Bhi09g02373 427 Gene3D Tetratricopeptide repeat domain 184 261 IPR011990 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02373 - - - bhj:120085845 799.275
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02373 Bhi-Chr9:64714318 Bhi01g01016 Bhi-Chr1:18534706 1.73E-09 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g148 . . . . Bpe02g01557 . . . . . Cma01g01704 . Car09g00310 . . . Cpe06g00394 . . . . . . . Cla05g01808 . . . . . . . . Cone17ag0941 Cone20ag0284 Lsi04g01391 . . . . . Bda01g01345 . . . Bma01g00912 . . Cmo01g01807 Cmo09g00361 Cma09g00362 . Car01g01322 . . Cpe02g00287 Bhi09g02373 . . . . . . . . . . . . . . . . Cme07g00180
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013021 0 2 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 28