Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02380 GGGTCCCTTTGAAGGTTCTTTCTACAACTGAAATCTTGAATTCCAAGGGAAATCTTCTTCATCATCATCATCTTCTTCTTCTTCCCCCAAAATGTGAACAAAATTTTTGTAATTGTAGCTGTCATTGGTCAATCAATGGATTCAATCCAAATCATCAATCCCTTCTTTTTCCATTTCCTTCTTCTTTATGCTCTACACGTTATTCAAGGTCCTCCCTCACTCTAAACTCAATTTTTTAACCCTAAATCTCTGCCTTCTTACTTCTTCTTCTTCTACTTCCTCCATTTTTACCTTTTTTTTTTTTTAGTTTTTTTTCCCCTCTGCCAGCTCTTTTTAGTGAGAAGTCAACCACATACGACAATCTAAATCATTATTTCTCCGCACCCTTTGCGGGATTCTTTCTCACAATCAACTTTTTCTCTCAATATGAATCCTTCCCACTTTTCTTCTTCCCTGAATTCGCTTCATGGATGAATGCATTTCACTGATCTTCAAACCAGCATGGAACTGAAGAAAGGGAAATTCGTCAGGTTTCACTCTAATCTGGAGAAAAATGATGGGAATAAGAGGCGTGTTGAGTTCCCATTACCAGTTTTTAGAATGGGGAAGAAATTAGAGAATGAAAGTAAAGTTATGAACTCGGATTCTTCAGGGAGGTCGAAGGTTTTTGTGGAGACTAATGGGTTACAAGAACAGAAGAATAAGAGGATTCTTAATCCTGAAAGTGAAAGGATTCTGAGATGGAATAGGGTTTTTCTCTTCTCTTGTTTGACAGCTCTTTTCGTTGACCCATTGTTCTTCTACCTTCCTTCAGTGATTCATCATAACAGGTCATCTTGTATGACAACTGATTTCAATTTGGGAATTGTTGTGACTGTTTTTCGCACTTTTGCCGATGTTTTTTATCTGTTGCATATGATTTTGAAGTTCCGGATTGCTTATGTATCACCAACTTCAAGAGTTTTTGGCAAAGGTGAACTTGTTACTGATCCAAAGAAGATTGCTAAACGCTATTTGAAGTCAGATTTCTGTATAGATCTCATTGCTTCTCTGCCTCTTCCTCAGATCTTAGGAGCAGCATGGTATTTACTTTCTGTGGAGCGCCATGCCATGTGCTGGAAGTTCACCTGCAGGAGAGAATTCAGTCCTATGAAATGCCTTCTTGACTATCTGGATTGTGGTACTTTAAATGATGTAGACCGCAGGATATGGGAAGTGAATACTACCGTTTTTAGCCAATGTTCTCCAGATGAAGACGTCGTTTTCAATTATGGGATATTTGCCGATGCGATTGCAAAAGATGTCATCTCCTCCAGGTTCCTTCAGAAGTATTTCTATTGTTTATGGTGGGGCTTACAGAACTTGAGTTCCTATGGTCAGGGTTTGGAAACGAGTATCTTCATAGGAGAAACTTTATTTGCTATCCTCATTGCTATAATGGGTTTGGTCTTGTTTGCGCATTTGATCGGAAACATGCAGACCTATTTGCAATCCATCACTGTGAGGCTGGAGGAGTGGAGGGTCAAGCGTCGAGACACTGAGGAATGGATGAAACATCGACAGCTCCCTCAAGATTTACAAGAACGTGTGAGGAGATTTGTTCAATATAAGTGGCTTGCAACACGAGGAGTGGACGAAGAATCGATCTTACAAGGCCTTCCAACAGATCTCCGTCGAGATATTCAGCGCCACTTGTGCCTCGACCTCGTTCGACGTGTTCCTTTTTTCGCACAGATGGATGATCAGCTACTTGATGCAATTTGTGAGCGACTGGCATCCTCTCTATGTACACAACGTACTTACATTGTTCGTGAAGGAGATCCTGTTACTGAGATGCTCTTTATCATTCGAGGAATGCTCGAGAGTTCCACGACGGATGGAGGACGGTCAGGTTTTTTCAATTCGATAACCTTAAGACCTGGGGATTTTTGTGGAGAAGAGCTTCTCGCTTGGGCATTGCTACCAAAATCATCAATCAGCTTGCCATCTTCTACTAGAACAGTCAGAGCAATCACTGAAGTGGAAGCCTTTGCTCTGCGTGCAGAGGATCTCAAATTTGTGGCTAACCAGTTTCGACGACTTCATAGCAAGAAGCTTCAGCATACCTTCAGGTTTTACTCTTATCACTGGAGAACCTGGGCTGCCTGCTTCATTCAGGCAGCATGGCGTCGCTTCAAAAGGCGAATCATAGCGAAGTCACTCAGCTTGCAGGAGTCTTTCTCGTTGACTCCCGAGAAGCCAGTGGCTGACGAAGCCGAACAAGAAGAGGAAGAACATAATACTCCACGCACCAATTACTCTCAAGCAAAACAAAACCTCGGTGTCACCATATTGGCTTCGAGGTTTGCTGCAAACACACGTAGAGGAGCACAAAAGCTCAAGGATGTCAACTTATCCAAGCTGCGAAAGCCTGATGAGCCAGACTTTTCTGAAGAACCAGACGATTAACTTGTTGGAGGAGAGGGGAAAAAAAAAAAGAAAAAAAAAACATTCTAGAAAAGCCTCATCTTTGACTTTAATAAGATATTCACTTGTATATTATTTTTTTTTACCTTTCATTCATTCATTTCTAACTTTATATTTTGATATTGGAACTCAACCAATTCGGGTGGGCTTTCAAACAA 2624 41.12 MHFTDLQTSMELKKGKFVRFHSNLEKNDGNKRRVEFPLPVFRMGKKLENESKVMNSDSSGRSKVFVETNGLQEQKNKRILNPESERILRWNRVFLFSCLTALFVDPLFFYLPSVIHHNRSSCMTTDFNLGIVVTVFRTFADVFYLLHMILKFRIAYVSPTSRVFGKGELVTDPKKIAKRYLKSDFCIDLIASLPLPQILGAAWYLLSVERHAMCWKFTCRREFSPMKCLLDYLDCGTLNDVDRRIWEVNTTVFSQCSPDEDVVFNYGIFADAIAKDVISSRFLQKYFYCLWWGLQNLSSYGQGLETSIFIGETLFAILIAIMGLVLFAHLIGNMQTYLQSITVRLEEWRVKRRDTEEWMKHRQLPQDLQERVRRFVQYKWLATRGVDEESILQGLPTDLRRDIQRHLCLDLVRRVPFFAQMDDQLLDAICERLASSLCTQRTYIVREGDPVTEMLFIIRGMLESSTTDGGRSGFFNSITLRPGDFCGEELLAWALLPKSSISLPSSTRTVRAITEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRFKRRIIAKSLSLQESFSLTPEKPVADEAEQEEEEHNTPRTNYSQAKQNLGVTILASRFAANTRRGAQKLKDVNLSKLRKPDEPDFSEEPDD 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 64955974 64960831 + XM_039040647.1 Bhi09g02380 44997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02380 657 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 198 654 - -
Bhi09g02380 657 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 44 198 - -
Bhi09g02380 657 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 198 654 - -
Bhi09g02380 657 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 44 198 - -
Bhi09g02380 657 Gene3D Jelly Rolls 415 535 IPR014710 -
Bhi09g02380 657 SUPERFAMILY Voltage-gated potassium channels 86 339 - -
Bhi09g02380 657 PRINTS EAG/ELK/ERG potassium channel family signature 148 157 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi09g02380 657 PRINTS EAG/ELK/ERG potassium channel family signature 286 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi09g02380 657 PRINTS EAG/ELK/ERG potassium channel family signature 312 323 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi09g02380 657 PRINTS EAG/ELK/ERG potassium channel family signature 330 339 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi09g02380 657 PRINTS EAG/ELK/ERG potassium channel family signature 380 387 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi09g02380 657 SMART cnmp_10 417 548 IPR000595 -
Bhi09g02380 657 MobiDBLite consensus disorder prediction 587 611 - -
Bhi09g02380 657 Gene3D Helix hairpin bin 345 408 - -
Bhi09g02380 657 SUPERFAMILY cAMP-binding domain-like 347 539 IPR018490 -
Bhi09g02380 657 MobiDBLite consensus disorder prediction 637 657 - -
Bhi09g02380 657 Pfam Ion transport protein 199 344 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bhi09g02380 657 Pfam Cyclic nucleotide-binding domain 441 528 IPR000595 -
Bhi09g02380 657 CDD CAP_ED 417 548 IPR000595 -
Bhi09g02380 657 ProSiteProfiles cAMP/cGMP binding motif profile. 417 547 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02380 Bhi-Chr9:64955974 Bhi11g01665 Bhi-Chr11:48031866 1.83E-43 dispersed
Bhi09g02380 Bhi-Chr9:64955974 Bhi09g02381 Bhi-Chr9:64955975 5.32E-135 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02380 K05391 - csv:101211072 867.455